sample size

样本量
  • 文章类型: Journal Article
    Dose-scale pharmacodynamic bioequivalence is recommended for evaluating the consistency of generic and innovator formulations of certain locally acting drugs, such as orlistat. This study aimed to investigate the standard methodology for sample size determination and the impact of study design on dose-scale pharmacodynamic bioequivalence using orlistat as the model drug. A population pharmacodynamic model of orlistat was developed using NONMEM 7.5.1 and utilized for subsequent simulations. Three different study designs were evaluated across various predefined relative bioavailability ratios of test/reference (T/R) formulations. These designs included Study Design 1 (2×1 crossover with T1 60 mg, R1 60 mg, and R2 120 mg), Study Design 2 (2×1 crossover with T2 120 mg, R1 60 mg, and R2 120 mg), and Study Design 3 (2×2 crossover with T1 60 mg, T2 120 mg, R1 60 mg, and R2 120 mg). Sample sizes were determined using a stochastic simulation and estimation approach. Under the same T/R ratio and power, Study Design 3 required the minimum sample size for bioequivalence, followed by Study Design 1, while Study Design 2 performed the worst. For Study Designs 1 and 3, a larger sample size was needed on the T/R ratio < 1.0 side for the same power compared to that on the T/R ratio > 1.0 side. The opposite asymmetry was observed for Study Design 2. We demonstrated that Study Design 3 is most effective for reducing the sample size for orlistat bioequivalence studies, and the impact of T/R ratio on sample size shows asymmetry.
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  • 文章类型: Journal Article
    OBJECTIVE: While statistical analysis plays a crucial role in medical science, some published studies might have utilized suboptimal analysis methods, potentially undermining the credibility of their findings. Critically appraising analytical approaches can help elevate the standard of evidence and ensure clinicians and other stakeholders have trustworthy results on which to base decisions. The aim of the present study was to examine the statistical characteristics of original articles published in Peruvian medical journals in 2021-2022.
    METHODS: We performed a methodological study of articles published between 2021 and 2022 from nine medical journals indexed in SciELO-Peru, Scopus, and Medline. We included original articles that conducted analytical analyses (i.e., association between variables). The statistical variables assessed were: statistical software used for analysis, sample size, and statistical methods employed (measures of effect), controlling for confounders, and the method employed for confounder control or epidemiological approaches.
    RESULTS: We included 313 articles (ranging from 11 to 77 across journals), of which 67.7% were cross-sectional studies. While 90.7% of articles specified the statistical software used, 78.3% omitted details on sample size calculation. Descriptive and bivariate statistics were commonly employed, whereas measures of association were less common. Only 13.4% of articles (ranging from 0% to 39% across journals) presented measures of effect controlling for confounding and explained the criteria for selecting such confounders.
    CONCLUSIONS: This study revealed important statistical deficiencies within analytical studies published in Peruvian journals, including inadequate reporting of sample sizes, absence of measures of association and confounding control, and suboptimal explanations regarding the methodologies employed for adjusted analyses. These findings highlight the need for better statistical reporting and researcher-editor collaboration to improve the quality of research production and dissemination in Peruvian journals.
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  • 文章类型: Journal Article
    描述和展示用于具有来自一只或两只眼睛的二元结果的眼科研究的样本量和功效计算。
    我们描述了四种常用眼睛设计的样本量和功率计算:(1)单眼设计或人设计:每个受试者一只眼睛或结果处于人水平;(2)配对设计:每个受试者两只眼睛,两只眼睛处于不同的治疗组;(3)两只眼睛设计:每个受试者两只眼睛,两只眼睛都在同一治疗组中;(4)每个受试者两只眼睛的混合物对于每个设计,我们展示了实际眼科研究中的样本量和功率计算。
    使用公式和商业或免费统计软件包,包括SAS,STATA,R,PS,我们计算了样本量和功率。我们证明了不同的统计软件包需要不同的参数,并提供类似的,但不相同,结果。我们强调,使用受试者两只眼睛的数据进行的研究需要考虑到Intereye相关性,以进行适当的样本量和功率计算。我们展示了与单眼设计相比,包括受试者的两只眼睛的设计的效率增益。
    眼科研究使用不同的眼睛设计,包括相同或不同治疗组中的一只或两只眼睛。适当的样本量和功率计算取决于眼睛设计,并且当来自一些或所有受试者的两只眼睛被包括在研究中时,应该考虑兴趣相关性。可以使用公式和商业或免费统计包执行计算。
    UNASSIGNED: To describe and demonstrate sample size and power calculation for ophthalmic studies with a binary outcome from one or both eyes.
    UNASSIGNED: We describe sample size and power calculation for four commonly used eye designs: (1) one-eye design or person-design: one eye per subject or outcome is at person-level; (2) paired design: two eyes per subject and two eyes are in different treatment groups; (3) two-eye design: two eyes per subject and both eyes are in the same treatment group; and (4) mixture design: mixture of one eye and two eyes per subject. For each design, we demonstrate sample size and power calculations in real ophthalmic studies.
    UNASSIGNED: Using formulas and commercial or free statistical packages including SAS, STATA, R, and PS, we calculated sample size and power. We demonstrated that different statistical packages require different parameters and provide similar, yet not identical, results. We emphasize that studies using data from two eyes of a subject need to account for the intereye correlation for appropriate sample size and power calculations. We demonstrate the gain in efficiency in designs that include two eyes of a subject compared to one-eye designs.
    UNASSIGNED: Ophthalmic studies use different eye designs that include one or both eyes in the same or different treatment groups. Appropriate sample size and power calculations depend on the eye design and should account for intereye correlation when two eyes from some or all subjects are included in a study. Calculations can be executed using formulas and commercial or free statistical packages.
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  • 文章类型: Journal Article
    在生物医学研究中,多个二进制端点的同时推断可能是感兴趣的。在这种情况下,需要适当的多重性调整来控制家庭错误率,表示做出错误测试决策的概率。在本文中,我们研究了两种执行单步p$p$值调整的方法,这些方法还考虑了端点之间可能的相关性。考虑了一种相当新颖和灵活的方法,称为多边际模型,这是基于边际模型的参数估计的叠加,并推导出它们的联合渐近分布。我们还研究了一种基于非参数向量的重采样方法,我们通过检查不同参数设置的家庭错误率和功率,将两种方法与Bonferroni方法进行比较,包括低比例和小样本量。结果表明,基于重采样的方法在功率方面始终优于其他方法,同时仍然控制家庭的错误率。多重边际模型方法,另一方面,表现出更保守的行为。然而,它在应用中提供了更多的通用性,允许更复杂的模型或直接计算同时置信区间。使用国家毒理学计划的毒理学数据集证明了该方法的实际应用。
    In biomedical research, the simultaneous inference of multiple binary endpoints may be of interest. In such cases, an appropriate multiplicity adjustment is required that controls the family-wise error rate, which represents the probability of making incorrect test decisions. In this paper, we investigate two approaches that perform single-step p $p$ -value adjustments that also take into account the possible correlation between endpoints. A rather novel and flexible approach known as multiple marginal models is considered, which is based on stacking of the parameter estimates of the marginal models and deriving their joint asymptotic distribution. We also investigate a nonparametric vector-based resampling approach, and we compare both approaches with the Bonferroni method by examining the family-wise error rate and power for different parameter settings, including low proportions and small sample sizes. The results show that the resampling-based approach consistently outperforms the other methods in terms of power, while still controlling the family-wise error rate. The multiple marginal models approach, on the other hand, shows a more conservative behavior. However, it offers more versatility in application, allowing for more complex models or straightforward computation of simultaneous confidence intervals. The practical application of the methods is demonstrated using a toxicological dataset from the National Toxicology Program.
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  • 文章类型: Journal Article
    结构神经成像数据已用于计算大脑生物学年龄(大脑年龄)的估计值,该估计值与其他生物学和行为上有意义的大脑发育和衰老指标有关。对脑年龄的持续研究兴趣突出了对健壮和公开可用的脑年龄模型的需求,这些模型是根据大量健康个体样本的数据进行预训练的。为了满足这一需求,我们之前发布了一个发育大脑年龄模型。在这里,我们将这项工作扩展到开发,经验验证,并传播预先训练的大脑年龄模型来覆盖人类的大部分寿命。为了实现这一点,在系统地研究了七个站点协调策略的影响后,我们选择了表现最好的模型,年龄范围,以及来自35,683名健康个体(年龄范围:5-90岁;53.59%为女性)的大脑形态计量学测量发现样本中大脑年龄预测的样本量。在包含2101个健康个体(年龄范围:8-80岁;55.35%女性)的独立样本中测试预训练模型的交叉数据集泛化性,并且在包含377个健康个体(年龄范围:9-25岁;49.87%女性)的进一步样本中测试纵向一致性。该实证检验得出以下发现:(1)当不应用站点协调时,根据形态测量数据进行年龄预测的准确性更高;(2)将发现样本分为两个年龄仓(5-40岁和40-90岁),与其他替代方案相比,在模型准确性和解释的年龄差异之间取得了更好的平衡;(3)在样本量超过1600名参与者时,脑年龄预测的模型准确性趋于稳定。这些发现已被纳入CentleBrain(https://centlebrain.org/#/brainAGE2),一个开放的科学,基于网络的个性化神经影像学指标平台。
    Structural neuroimaging data have been used to compute an estimate of the biological age of the brain (brain-age) which has been associated with other biologically and behaviorally meaningful measures of brain development and aging. The ongoing research interest in brain-age has highlighted the need for robust and publicly available brain-age models pre-trained on data from large samples of healthy individuals. To address this need we have previously released a developmental brain-age model. Here we expand this work to develop, empirically validate, and disseminate a pre-trained brain-age model to cover most of the human lifespan. To achieve this, we selected the best-performing model after systematically examining the impact of seven site harmonization strategies, age range, and sample size on brain-age prediction in a discovery sample of brain morphometric measures from 35,683 healthy individuals (age range: 5-90 years; 53.59% female). The pre-trained models were tested for cross-dataset generalizability in an independent sample comprising 2101 healthy individuals (age range: 8-80 years; 55.35% female) and for longitudinal consistency in a further sample comprising 377 healthy individuals (age range: 9-25 years; 49.87% female). This empirical examination yielded the following findings: (1) the accuracy of age prediction from morphometry data was higher when no site harmonization was applied; (2) dividing the discovery sample into two age-bins (5-40 and 40-90 years) provided a better balance between model accuracy and explained age variance than other alternatives; (3) model accuracy for brain-age prediction plateaued at a sample size exceeding 1600 participants. These findings have been incorporated into CentileBrain (https://centilebrain.org/#/brainAGE2), an open-science, web-based platform for individualized neuroimaging metrics.
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  • 文章类型: Journal Article
    背景:纵向序数数据通常使用边际比例赔率模型分析,将序数结果与生物医学和健康科学中的协变量相关联。广义估计方程(GEE)一致地估计边际模型的回归参数,即使工作协方差结构被错误指定。对于小样本纵向二进制数据,最近的研究表明,回归参数的偏差可能来自GEE,并通过将Firth对似然得分方程的调整应用于GEE,就好像广义估计函数是似然得分函数一样,解决了这个问题.在这份手稿中,对于纵向序数数据的比例赔率模型,研究了GEE的小样本特性,并得出了偏置降低的GEE(BR-GEE)。
    方法:通过将最初为比例赔率模型的似然得分函数导出的调整函数应用于GEE,我们生产了BR-GEE。我们通过模拟研究了GEE和BR-GEE的小样本特性,并将其应用于临床研究数据集。
    结果:在模拟研究中,BR-GEE的偏差接近零,均方根误差小于GEE,置信区间的覆盖概率接近或高于标称水平。仿真还表明,BR-GEE保持了接近或低于标称水平的I型错误率。
    结论:对于涉及少数受试者的纵向序数数据的分析,BR-GEE有利于获得边际比例赔率模型回归参数的估计值。
    BACKGROUND: Longitudinal ordinal data are commonly analyzed using a marginal proportional odds model for relating ordinal outcomes to covariates in the biomedical and health sciences. The generalized estimating equation (GEE) consistently estimates the regression parameters of marginal models even if the working covariance structure is misspecified. For small-sample longitudinal binary data, recent studies have shown that the bias of regression parameters may result from the GEE and have addressed the issue by applying Firth\'s adjustment for the likelihood score equation to the GEE as if generalized estimating functions were likelihood score functions. In this manuscript, for the proportional odds model for longitudinal ordinal data, the small-sample properties of the GEE were investigated, and a bias-reduced GEE (BR-GEE) was derived.
    METHODS: By applying the adjusted function originally derived for the likelihood score function of the proportional odds model to the GEE, we produced the BR-GEE. We investigated the small-sample properties of both GEE and BR-GEE through simulation and applied them to a clinical study dataset.
    RESULTS: In simulation studies, the BR-GEE had a bias closer to zero, smaller root mean square error than the GEE with coverage probability of confidence interval near or above the nominal level. The simulation also showed that BR-GEE maintained a type I error rate near or below the nominal level.
    CONCLUSIONS: For the analysis of longitudinal ordinal data involving a small number of subjects, the BR-GEE is advantageous for obtaining estimates of the regression parameters of marginal proportional odds models.
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  • 文章类型: Journal Article
    背景:临床研究通常受到可用资源的限制,这导致样本量受到限制。当样本量太小时,我们使用模拟数据来说明研究意义。
    结果:使用2个理论种群,每个种群N=1000,我们从每个种群中随机抽样10个,并进行统计比较,以帮助得出两个种群是否不同的结论。这个练习重复了总共4项研究:2个得出的结论是,这2个群体在统计学上有显著差异,而2则无统计学差异。
    结论:我们的模拟例子表明,样本量在临床研究中起着重要作用。结果和结论,就手段估计而言,中位数,皮尔逊相关性,卡方检验,和P值,是不可靠的小样本。
    BACKGROUND: Clinical studies are often limited by resources available, which results in constraints on sample size. We use simulated data to illustrate study implications when the sample size is too small.
    RESULTS: Using 2 theoretical populations each with N = 1000, we randomly sample 10 from each population and conduct a statistical comparison, to help make a conclusion about whether the 2 populations are different. This exercise is repeated for a total of 4 studies: 2 concluded that the 2 populations are statistically significantly different, while 2 showed no statistically significant difference.
    CONCLUSIONS: Our simulated examples demonstrate that sample sizes play important roles in clinical research. The results and conclusions, in terms of estimates of means, medians, Pearson correlations, chi-square test, and P values, are unreliable with small samples.
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  • 文章类型: Journal Article
    样本量几乎是许多医学研究人员心中最常见的问题。该大小决定了结果的可靠性,并且有助于检测存在时的医学上重要的效果。一些研究由于不适当的样本量而错过了重要的影响。许多研究生和成熟的研究人员经常联系统计学家,帮助他们确定适合他们研究的样本量。有80多个公式可用于计算不同设置的样本量,选择需要一些专业知识。它们的使用更加困难,因为大多数精确的公式非常复杂。另一个困难是不同的书,软件,和网站使用相同的问题不同的公式。已发表的公式中的这种差异也使生物统计学家感到困惑。这次交流的目的是以简单但正确的形式在一个地方为许多情况提供统一的公式,以及它们适用的设置。这将有助于为人们提议做的研究选择合适的公式,并充满信心地使用它。这种交流仅限于检测存在时医学上重要的影响所需的样本量-统计学家将其称为假设情况的检验。这样的收藏在任何地方都没有,甚至在任何一本书中都没有。用于估计的样本量公式是不同的,这里不讨论。
    The sample size is just about the most common question in the minds of many medical researchers. This size determines the reliability of the results and helps to detect a medically important effect when present. Some studies miss an important effect due to inappropriate sample size. Many postgraduate students and established researchers often contact a statistician to help them determine an appropriate sample size for their study. More than 80 formulas are available to calculate sample size for different settings and the choice requires some expertise. Their use is even more difficult because most exact formulas are quite complex. An added difficulty is that different books, software, and websites use different formulas for the same problem. Such discrepancy in the published formulas confounds a biostatistician also. The objective of this communication is to present uniformly looking formulas for many situations together at one place in their simple but correct form, along with the setting where they are applicable. This will help in choosing an appropriate formula for the kind of research one is proposing to do and use it with confidence. This communication is restricted to the sample size required to detect a medically important effect when present - known to the statisticians as the test of hypothesis situation. Such a collection is not available anywhere, not even in any book. The sample size formulas for estimation are different and not discussed here.
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  • 文章类型: Journal Article
    目的:颞下颌关节紊乱病(TMD)是用于描述咀嚼肌和颞下颌关节(TMJ)的病理(功能障碍和疼痛)的术语。牙科研究的出版有明显的上升趋势,需要不断提高研究质量。因此,本研究旨在分析TMD随机对照试验中样本量和效应量计算的使用.
    方法:期限限制为整整5年,即,2019年、2020年、2021年、2022年和2023年发表的论文。使用过滤器文章类型-“随机对照试验”。这些研究以两级量表进行分级:0-1。在1的情况下,计算样本量(SS)和效应量(ES)。
    结果:在整个研究样本中,58%的研究中使用了SS,而15%的研究使用ES。
    结论:质量应该随着研究的增加而提高。影响质量的一个因素是统计水平。SS和ES计算为理解作者获得的结果提供了基础。访问公式,在线计算器和软件促进了这些分析。高质量的试验为医学进步提供了坚实的基础,促进个性化疗法的发展,提供更精确和有效的治疗,增加患者康复的机会。提高TMD研究的质量,和一般的医学研究,有助于增加公众对医疗进步的信心,并提高病人护理的标准。
    OBJECTIVE: Temporomandibular disorder (TMD) is the term used to describe a pathology (dysfunction and pain) in the masticatory muscles and temporomandibular joint (TMJ). There is an apparent upward trend in the publication of dental research and a need to continually improve the quality of research. Therefore, this study was conducted to analyse the use of sample size and effect size calculations in a TMD randomised controlled trial.
    METHODS: The period was restricted to the full 5 years, i.e., papers published in 2019, 2020, 2021, 2022, and 2023. The filter article type-\"Randomized Controlled Trial\" was used. The studies were graded on a two-level scale: 0-1. In the case of 1, sample size (SS) and effect size (ES) were calculated.
    RESULTS: In the entire study sample, SS was used in 58% of studies, while ES was used in 15% of studies.
    CONCLUSIONS: Quality should improve as research increases. One factor that influences quality is the level of statistics. SS and ES calculations provide a basis for understanding the results obtained by the authors. Access to formulas, online calculators and software facilitates these analyses. High-quality trials provide a solid foundation for medical progress, fostering the development of personalized therapies that provide more precise and effective treatment and increase patients\' chances of recovery. Improving the quality of TMD research, and medical research in general, helps to increase public confidence in medical advances and raises the standard of patient care.
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  • 文章类型: Journal Article
    务实试验旨在评估常规患者护理环境中的干预效果,与在受控条件下进行的解释性试验相反。在衰老研究中,务实试验是在老年人群中获得真实世界证据的重要设计,在审判中往往代表性不足。在这次审查中,我们从频率论方法中讨论了实用试验设计和分析的统计学考虑。当选择因变量时,必须使用与常规医疗高度相关的结果,同时提供足够的统计能力.除了传统上使用的二元结果,序数结果可以提供务实的答案,并获得统计能力。聚类随机化需要仔细考虑样本量计算和分析方法,特别是关于缺失的数据和结果变量。建议使用混合效应模型和广义估计方程(GEE)进行分析,以考虑中心效应,具有可用于样本量估计的工具。多臂研究在样本量计算方面提出了挑战,需要调整设计效果,并考虑多种比较校正方法。二次分析很常见,但由于统计能力降低和错误发现率的风险,因此需要谨慎。安全数据收集方法应平衡实用主义和数据质量。总的来说,了解统计学考虑因素对于设计在现实条件下评估老年人群干预措施的严格务实试验至关重要.总之,这篇综述的重点是设计务实临床试验的人感兴趣的各种统计主题,考虑到老龄化研究领域的相关性。
    Pragmatic trials aim to assess intervention efficacy in usual patient care settings, contrasting with explanatory trials conducted under controlled conditions. In aging research, pragmatic trials are important designs for obtaining real-world evidence in elderly populations, which are often underrepresented in trials. In this review, we discuss statistical considerations from a frequentist approach for the design and analysis of pragmatic trials. When choosing the dependent variable, it is essential to use an outcome that is highly relevant to usual medical care while also providing sufficient statistical power. Besides traditionally used binary outcomes, ordinal outcomes can provide pragmatic answers with gains in statistical power. Cluster randomization requires careful consideration of sample size calculation and analysis methods, especially regarding missing data and outcome variables. Mixed effects models and generalized estimating equations (GEEs) are recommended for analysis to account for center effects, with tools available for sample size estimation. Multi-arm studies pose challenges in sample size calculation, requiring adjustment for design effects and consideration of multiple comparison correction methods. Secondary analyses are common but require caution due to the risk of reduced statistical power and false-discovery rates. Safety data collection methods should balance pragmatism and data quality. Overall, understanding statistical considerations is crucial for designing rigorous pragmatic trials that evaluate interventions in elderly populations under real-world conditions. In conclusion, this review focuses on various statistical topics of interest to those designing a pragmatic clinical trial, with consideration of aspects of relevance in the aging research field.
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