rac1 GTP-Binding Protein

rac1 GTP 结合蛋白
  • 文章类型: Journal Article
    染色体缩合2(RCC2)和RAS相关的C3肉毒杆菌毒素底物1(Rac1)的调节因子与促进乳腺癌细胞增殖和迁移有关。已提出涉及p53/RCC2/Rac1的信号通路有助于调节结肠癌转移。然而,直到现在,该通路尚未在乳腺癌中得到彻底研究.本研究旨在探讨免疫组织化学表达的影响以及RCC2,Rac1和p53在乳腺浸润性导管癌(IDC)中的相关性。
    使用RCC2、Rac1和p53抗体对120个乳腺IDC样本进行免疫染色。进行统计分析以检查这些抗体之间的相关性。
    在116例中观察到RCC2,Rac1和p53的阳性表达(96.7%),120(100%),33例(27.5%)乳腺癌病例,分别。RCC2,Rac1和p53显示与不良预后参数如频繁有丝分裂相关,高Ki-67状态,阳性淋巴管浸润(LVI),和晚期肿瘤阶段。在每个免疫组织化学标记和其他两个标记之间发现了高度显著的直接相关性。总生存期缩短与多灶性肿瘤有关(P=0.017),晚期肿瘤分期(T3)(P=0.010),管腔B型亚型(P=0.015),进行性疾病(P=0.003),Her2neu阳性状态(P=0.008),远处器官转移(P<0.001)。然而,RCC2、Rac1和p53与总生存期没有显著关联。
    乳腺IDC中RCC2,Rac1和p53的高表达水平表明它们在肿瘤行为中的潜在作用。RCC2和Rac1与不良预后参数的关联可以作为侵袭性肿瘤的预测指标。因此暗示靶向治疗可能有益于乳腺癌的治疗。
    UNASSIGNED: The regulator of chromosome condensation 2 (RCC2) and RAS-related C3 botulinum toxin substrate 1 (Rac1) have been implicated in the promotion of breast cancer cell proliferation and migration. The signaling pathway involving p53/RCC2/Rac1 has been proposed to contribute to the regulation of colon cancer metastasis. However, until now, this pathway has not been thoroughly investigated in breast cancer. This study seeks to explore the influence of immunohistochemical expression and the correlation among RCC2, Rac1, and p53 in breast infiltrating ductal carcinoma (IDC).
    UNASSIGNED: Immunostaining was performed on 120 breast IDC specimens using RCC2, Rac1, and p53 antibodies. Statistical analyses were conducted to examine the correlations between these antibodies.
    UNASSIGNED: A Positive expression of RCC2, Rac1, and p53 was observed in 116 (96.7%), 120 (100%), and 33 (27.5%) of the breast cancer cases, respectively. RCC2, Rac1, and p53 demonstrated association with poor prognostic parameters such as frequent mitoses, high Ki-67 status, positive lymphovascular invasion (LVI), and advanced tumor stage. A highly significant direct correlation was found between each immunohistochemical marker and the other two markers. Shorter overall survival was linked to multifocal tumors (P=0.017), advanced tumor stage (T3) (P=0.010), Luminal B subtype (P=0.015), progressive disease (P=0.003), positive Her2neu status (P=0.008), and metastasis to distant organs (P<0.001). However, RCC2, Rac1, and p53 did not exhibit a significant association with overall survival.
    UNASSIGNED: The high expression levels of RCC2, Rac1, and p53 in breast IDC suggest their potential role in tumor behavior. The association of RCC2 and Rac1 with poor prognostic parameters may serve as predictive indicators for aggressive tumors, thus implying that targeted therapy could be beneficial in the treatment of breast cancer.
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  • 文章类型: Journal Article
    异常的可变剪接事件在癌症生物学中起着至关重要的作用。有助于肿瘤侵袭,转移,上皮-间质转化,和抗药性。最近的研究表明,选择性剪接是结直肠癌转录组变异的关键特征。在全球恶性肿瘤中,发病率和死亡率均排名第三。长链非编码RNA可以通过充当反式调节剂来调节这一过程,招募剪接因素,或者驱使他们去特定的目标基因。LncH19是一种在几种肿瘤类型中不调节的lncRNA,在结直肠癌中,它在肿瘤发病中起着至关重要的作用,programming,和转移。在本文中,我们发现,在结肠直肠癌细胞中,长链非编码RNAH19可以结合未成熟RNA和剪接因子如hnRNPM和RBFOX2。通过生物信息学分析,我们确定了57个与lncH19相关的转录本,并且含有两种剪接因子的结合位点,hnRNPM,RBFOX2在这些成绩单中,我们鉴定了GTPase-RAC1的mRNA,其选择性剪接的同工型,RAC1B,在恶性转化中被归因于几个角色。我们确认了,在体外,剪接因子与转录物RAC1和lncH19的结合。在两种结直肠癌细胞系(SW620和HCT116)中表达实验的损失和获得证明,lncH19是RAC1B表达所必需的,通过RAC1B,它诱导c-Myc和Cyclin-D增加。在体内,结直肠癌患者活检的调查显示,所有探索的基因水平较高(lncH19,RAC1B,c-Myc和Cyclin-D)关于健康的对应物,从而支持我们的体外模型。此外,我们发现结直肠癌患者中lncH19和RAC1B呈正相关.最后,我们证明了lncH19作为航天飞机,驱动剪接因子RBFOX2和hnRNPM到RAC1,允许外显子保留和RAC1B表达。本文显示的数据代表了一种新的作用机制的第一个证据,通过该机制,lncH19通过调节可变剪接来促进结直肠癌,从而发挥其作为癌基因的功能。
    Aberrant alternative splicing events play a critical role in cancer biology, contributing to tumor invasion, metastasis, epithelial-mesenchymal transition, and drug resistance. Recent studies have shown that alternative splicing is a key feature for transcriptomic variations in colorectal cancer, which ranks third among malignant tumors worldwide in both incidence and mortality. Long non-coding RNAs can modulate this process by acting as trans-regulatory agents, recruiting splicing factors, or driving them to specific targeted genes. LncH19 is a lncRNA dis-regulated in several tumor types and, in colorectal cancer, it plays a critical role in tumor onset, progression, and metastasis. In this paper, we found, that in colorectal cancer cells, the long non-coding RNA H19 can bind immature RNAs and splicing factors as hnRNPM and RBFOX2. Through bioinformatic analysis, we identified 57 transcripts associated with lncH19 and containing binding sites for both splicing factors, hnRNPM, and RBFOX2. Among these transcripts, we identified the mRNA of the GTPase-RAC1, whose alternatively spliced isoform, RAC1B, has been ascribed several roles in the malignant transformation. We confirmed, in vitro, the binding of the splicing factors to both the transcripts RAC1 and lncH19. Loss and gain of expression experiments in two colorectal cancer cell lines (SW620 and HCT116) demonstrated that lncH19 is required for RAC1B expression and, through RAC1B, it induces c-Myc and Cyclin-D increase. In vivo, investigation from biopsies of colorectal cancer patients showed higher levels of all the explored genes (lncH19, RAC1B, c-Myc and Cyclin-D) concerning the healthy counterpart, thus supporting our in vitro model. In addition, we identified a positive correlation between lncH19 and RAC1B in colorectal cancer patients. Finally, we demonstrated that lncH19, as a shuttle, drives the splicing factors RBFOX2 and hnRNPM to RAC1 allowing exon retention and RAC1B expression. The data shown in this paper represent the first evidence of a new mechanism of action by which lncH19 carries out its functions as an oncogene by prompting colorectal cancer through the modulation of alternative splicing.
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  • 文章类型: Journal Article
    F-肌动蛋白的协同激活和抑制支持形态发生的运动。了解调节F-肌动蛋白的蛋白质很重要,因为这些蛋白质在癌症等疾病中被错误调节。我们对秀丽隐杆线虫胚胎表皮形态发生的研究将GTP酶CED-10/Rac1鉴定为F-肌动蛋白的必需激活剂。然而,我们需要确定全球环境基金,或鸟嘌呤-核苷酸交换因子,在胚胎细胞迁移期间激活CED-10/Rac1。全球环境基金的两个组成部分,已知CED-5/CED-12可以激活CED-10/Rac1以促进细胞运动,从而导致胚胎发育过程中垂死细胞的吞噬。和幼虫远端尖端细胞的后期细胞迁移。据信CED-5/CED-12通过促进F-肌动蛋白的形成来促进尸体吞噬和DTC迁移的细胞运动。因此,我们测试了CED-5/CED-12是否参与了胚胎迁移,得到了一个矛盾的结果.CED-5/CED-12绝对支持胚胎迁移,因为它们的丢失导致胚胎因表皮细胞迁移失败而死亡。然而,CED-5/CED-12抑制迁移表皮中的F-肌动蛋白,与CED-10全球环境基金的预期相反。为了解决CED-12/CED-5如何对F-肌动蛋白产生两种相反的作用,在尸体吞噬和细胞迁移过程中,我们调查了CED-12是否具有GAP(GTP酶激活蛋白)功能。CED-12中的候选GAP区域背对CED-5GEF催化区域。在CED-12GAP区域(R537A)中突变候选催化精氨酸改变了表皮细胞迁移功能,而不是尸体吞噬功能.我们通过干扰CED-5结合Rac1/CED-10的能力来干扰GEF功能。CED-5/DOCK中的丝氨酸-精氨酸突变预测结合并稳定Rac1进行催化,导致腹侧围栏和尸体吞噬的损失。遗传和表达研究强烈支持GAP功能可能作用于不同的GTP酶。因此,我们建议CED-5/CED-12支持多种GTP酶的循环,通过使用不同的域,促进和抑制F-肌动蛋白成核。
    Coordinated activation and inhibition of F-actin supports the movements of morphogenesis. Understanding the proteins that regulate F-actin is important, since these proteins are mis-regulated in diseases like cancer. Our studies of C. elegans embryonic epidermal morphogenesis identified the GTPase CED-10/Rac1 as an essential activator of F-actin. However, we need to identify the GEF, or Guanine-nucleotide Exchange Factor, that activates CED-10/Rac1 during embryonic cell migrations. The two-component GEF, CED-5/CED-12, is known to activate CED-10/Rac1 to promote cell movements that result in the engulfment of dying cells during embryogenesis, and a later cell migration of the larval Distal Tip Cell. It is believed that CED-5/CED-12 powers cellular movements of corpse engulfment and DTC migration by promoting F-actin formation. Therefore, we tested if CED-5/CED-12 was involved in embryonic migrations, and got a contradictory result. CED-5/CED-12 definitely support embryonic migrations, since their loss led to embryos that died due to failed epidermal cell migrations. However, CED-5/CED-12 inhibited F-actin in the migrating epidermis, the opposite of what was expected for a CED-10 GEF. To address how CED-12/CED-5 could have two opposing effects on F-actin, during corpse engulfment and cell migration, we investigated if CED-12 harbors GAP (GTPase Activating Protein) functions. A candidate GAP region in CED-12 faces away from the CED-5 GEF catalytic region. Mutating a candidate catalytic Arginine in the CED-12 GAP region (R537A) altered the epidermal cell migration function, and not the corpse engulfment function. We interfered with GEF function by interfering with CED-5\'s ability to bind Rac1/CED-10. Mutating Serine-Arginine in CED-5/DOCK predicted to bind and stabilize Rac1 for catalysis, resulted in loss of both ventral enclosure and corpse engulfment. Genetic and expression studies strongly support that the GAP function likely acts on different GTPases. Thus, we propose CED-5/CED-12 support the cycling of multiple GTPases, by using distinct domains, to both promote and inhibit F-actin nucleation.
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  • 文章类型: Journal Article
    硫酸皮肤素(DS)是一种糖胺聚糖,其特征在于具有可变的结构和在动物组织中的广泛分布。我们先前证明,当以高浓度使用时,DS的一些结构变体能够在腔内乳腺癌细胞中快速诱导中度坏死。我们现在已经使用免疫荧光研究了DS介导的坏死执行器MLKL激活的潜在机制,蛋白质印迹和药理抑制。两个主要过程,DS影响MLKL的磷酸化,是NFκB的激活,这表明了一种压抑的影响,和氧化应激的诱导,具有刺激作用。此外,DS引发的氧化还原失衡是通过这种糖胺聚糖对肌动蛋白细胞骨架重排的调节作用而发生的,需要改变小RhoGTP酶Rac1的活性。在腔内乳腺癌细胞中由DS引起的所有这些过程都显示出对这种聚糖的结构和癌细胞类型的依赖性。此外,我们的结果表明,高剂量DS刺激管腔内乳腺癌细胞坏死性凋亡的主要机制是通过这种聚糖对粘附分子活性的影响介导的.
    Dermatan sulfate (DS) is a glycosaminoglycan characterized by having a variable structure and wide distribution in animal tissues. We previously demonstrated that some structural variants of DS were able to rapidly induce moderate necroptosis in luminal breast cancer cells when used at a high concentration. We have now investigated the mechanisms underlying the DS-mediated activation of the necroptotic executor MLKL using immunofluorescence, Western blotting and pharmacological inhibition. The two main processes, by which DS influences the phosphorylation of MLKL, are the activation of NFκB, which demonstrates a suppressive impact, and the induction of oxidative stress, which has a stimulatory effect. Moreover, the triggering of the redox imbalance by DS occurs via the modulatory influence of this glycosaminoglycan on the rearrangement of the actin cytoskeleton, requiring alterations in the activity of small Rho GTP-ase Rac1. All of these processes that were elicited by DS in luminal breast cancer cells showed a dependence on the structure of this glycan and the type of cancer cells. Furthermore, our results suggest that a major mechanism that is involved in the stimulation of necroptosis in luminal breast cancer cells by high doses of DS is mediated via the effect of this glycan on the activity of adhesion molecules.
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  • 文章类型: Journal Article
    小型GTPases的Ras超家族中研究最广泛的成员之一,Rac1是一种细胞内信号转导,可重塑肌动蛋白和磷酸化信号网络。先前的研究表明,Rac1介导的信号与海马依赖性工作记忆以及长期形式的学习和记忆有关,并且Rac1可以调节突触前和突触后可塑性的形式。Rac1介导的这些不同的认知功能和可塑性形式是如何联系在一起的,然而,不清楚。这里,我们表明,在突触前末端表达基因编码的Rac1抑制剂后,小鼠的空间工作记忆受到选择性损害,而长期认知过程受到突触后部位Rac1抑制的影响。为了研究这种突触前过程的调节机制,我们利用质谱的新进展来鉴定突触前Rac1信号的蛋白质组学和翻译后景观。我们鉴定了富含活性Rac1的丝氨酸/苏氨酸激酶和磷酸化细胞骨架信号和突触小泡蛋白。这些蛋白质中的磷酸化位点位于可能对突触小泡具有调节作用的位置。与此一致,我们还报告了突触前Rac1抑制后突触小泡的分布和形态以及突触后超微结构的变化。总的来说,这项研究揭示了Rac1信号在认知过程中的突触前作用,并提供了对其潜在调节机制的见解.
    One of the most extensively studied members of the Ras superfamily of small GTPases, Rac1 is an intracellular signal transducer that remodels actin and phosphorylation signaling networks. Previous studies have shown that Rac1-mediated signaling is associated with hippocampal-dependent working memory and longer-term forms of learning and memory and that Rac1 can modulate forms of both pre- and postsynaptic plasticity. How these different cognitive functions and forms of plasticity mediated by Rac1 are linked, however, is unclear. Here, we show that spatial working memory in mice is selectively impaired following the expression of a genetically encoded Rac1 inhibitor at presynaptic terminals, while longer-term cognitive processes are affected by Rac1 inhibition at postsynaptic sites. To investigate the regulatory mechanisms of this presynaptic process, we leveraged new advances in mass spectrometry to identify the proteomic and post-translational landscape of presynaptic Rac1 signaling. We identified serine/threonine kinases and phosphorylated cytoskeletal signaling and synaptic vesicle proteins enriched with active Rac1. The phosphorylated sites in these proteins are at positions likely to have regulatory effects on synaptic vesicles. Consistent with this, we also report changes in the distribution and morphology of synaptic vesicles and in postsynaptic ultrastructure following presynaptic Rac1 inhibition. Overall, this study reveals a previously unrecognized presynaptic role of Rac1 signaling in cognitive processes and provides insights into its potential regulatory mechanisms.
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  • 文章类型: Journal Article
    成人的伤口由于纤维化而形成疤痕,而那些在胚胎中再生。如果胚胎的伤口愈合在成人中被模仿,疤痕可以减少。我们发现小鼠胎儿可以在胚胎第(E)13天之前再生组织,但此后仍然存在可见的疤痕。这种再生模式需要通过激活单磷酸腺苷(AMP)激活的蛋白激酶(AMPK)在上皮伤口边缘形成肌动蛋白电缆。这里,我们调查了水杨酸盐的AMPK激活作用,一种抗炎药,促进再生伤口愈合。水杨酸盐给药导致E14胎儿肌动蛋白电缆形成和完全伤口再生,通常应该出现疤痕,并促进了肌膜肌肉的收缩,导致完全的伤口再生。体外,水杨酸盐进一步诱导小鼠表皮角质形成细胞中的肌动蛋白重塑,其方式取决于细胞和底物靶特异性AMPK激活以及随后对Rac1信号传导的调节。此外,水杨酸盐促进上皮形成,增强肌膜肌肉收缩,并抑制成年小鼠的瘢痕形成。损伤后立即向伤口施用水杨酸盐可能是通过促进类似于胚胎伤口的伤口愈合模式来预防瘢痕形成的新方法。
    Wounds that occur in adults form scars due to fibrosis, whereas those in embryos regenerate. If wound healing in embryos is mimicked in adults, scarring can be reduced. We found that mouse fetuses could regenerate tissues up to embryonic day (E) 13, but visible scars remained thereafter. This regeneration pattern requires actin cable formation at the epithelial wound margin via activation of adenosine monophosphate (AMP)-activated protein kinase (AMPK). Here, we investigated whether the AMPK-activating effect of salicylate, an anti-inflammatory drug, promotes regenerative wound healing. Salicylate administration resulted in actin cable formation and complete wound regeneration in E14 fetuses, in which scarring should have normally occurred, and promoted contraction of the panniculus carnosus muscle, resulting in complete wound regeneration. In vitro, salicylate further induced actin remodeling in mouse epidermal keratinocytes in a manner dependent on cell and substrate target-specific AMPK activation and subsequent regulation of Rac1 signaling. Furthermore, salicylate promoted epithelialization, enhanced panniculus carnosus muscle contraction, and inhibited scar formation in adult mice. Administration of salicylates to wounds immediately after injury may be a novel method for preventing scarring by promoting a wound healing pattern similar to that of embryonic wounds.
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  • 文章类型: Journal Article
    缺氧和低葡萄糖丰度通常同时发生在炎症部位。在单核细胞和巨噬细胞中,葡萄糖-氧剥夺刺激NLRP3炎性体的组装以产生促炎细胞因子IL-1β。我们发现伴随的葡萄糖剥夺和缺氧通过限制HMG-CoA还原酶(HMGCR)的功能激活NLRP3炎性体,甲羟戊酸激酶途径的限速酶。HMGCR参与香叶基香叶基焦磷酸(GGD)的合成,这是蛋白质的戊烯化和脂质膜整合所必需的。在葡萄糖缺氧条件下,G3GPP合成减少,导致小GTP酶Rac1的戊烯化减少,非戊烯化Rac1与支架蛋白IQGAP1的结合增加,并增强NLRP3炎性体的激活。为了应对有限的氧气和葡萄糖供应,由于甲羟戊酸激酶缺乏或Muckle-Wells综合征导致甲羟戊酸途径受损的患者单核细胞比对照单核细胞释放更多的IL-1β。因此,由于在葡萄糖-氧剥夺下抑制HMGCR而导致的GGMP合成减少,通常通过Rac1的戊烯化进行检查。我们建议该机制在炎性自身免疫病症中也是活跃的。
    Hypoxia and low glucose abundance often occur simultaneously at sites of inflammation. In monocytes and macrophages, glucose-oxygen deprivation stimulates the assembly of the NLRP3 inflammasome to generate the proinflammatory cytokine IL-1β. We found that concomitant glucose deprivation and hypoxia activated the NLRP3 inflammasome by constraining the function of HMG-CoA reductase (HMGCR), the rate-limiting enzyme of the mevalonate kinase pathway. HMGCR is involved in the synthesis of geranylgeranyl pyrophosphate (GGPP), which is required for the prenylation and lipid membrane integration of proteins. Under glucose-oxygen deprivation, GGPP synthesis was decreased, leading to reduced prenylation of the small GTPase Rac1, increased binding of nonprenylated Rac1 to the scaffolding protein IQGAP1, and enhanced activation of the NLRP3 inflammasome. In response to restricted oxygen and glucose supply, patient monocytes with a compromised mevalonate pathway due to mevalonate kinase deficiency or Muckle-Wells syndrome released more IL-1β than did control monocytes. Thus, reduced GGPP synthesis due to inhibition of HMGCR under glucose-oxygen deprivation results in proinflammatory innate responses, which are normally kept in check by the prenylation of Rac1. We suggest that this mechanism is also active in inflammatory autoimmune conditions.
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  • 文章类型: Journal Article
    至少三分之一的上皮性卵巢癌(OC)患者在诊断时出现腹水,几乎所有患者在复发时都有腹水,尤其是因为OC细胞倾向于在腹腔中扩散,导致腹膜转移。腹水对转移前生态位发育的影响,以及导致间皮癌细胞定植的生物学机制,仍然知之甚少。这里,我们发现,腹水通过影响间皮细胞的形态和破坏它们在细胞周期中的分布来削弱间皮。腹水还通过改变细胞连接的组织而导致间皮完整性的不稳定,但不影响间皮细胞合成N-cadherin和ZO-1。此外,腹水诱导局灶性接触的解体,并导致肌动蛋白细胞骨架重组,这可能取决于Rac1的活性。腹水可以使间皮的ECM蛋白致密化和重组,尤其是纤维蛋白原/纤维蛋白,表明它是OC球体周围纤维蛋白原和纤维蛋白的来源。腹水中的纤维蛋白导致OC球状体与间皮粘附,和腹水促进它们的解聚,然后清除间皮细胞。涉及αV和α5β1整合素。总之,腹水及其纤维蛋白原/纤维蛋白成分会影响间皮的完整性,并促进间皮中OC球体的整合素依赖性植入。
    At least one-third of patients with epithelial ovarian cancer (OC) present ascites at diagnosis and almost all have ascites at recurrence especially because of the propensity of the OC cells to spread in the abdominal cavity leading to peritoneal metastasis. The influence of ascites on the development of pre-metastatic niches, and on the biological mechanisms leading to cancer cell colonization of the mesothelium, remains poorly understood. Here, we show that ascites weakens the mesothelium by affecting the morphology of mesothelial cells and by destabilizing their distribution in the cell cycle. Ascites also causes destabilization of the integrity of mesothelium by modifying the organization of cell junctions, but it does not affect the synthesis of N-cadherin and ZO-1 by mesothelial cells. Moreover, ascites induces disorganization of focal contacts and causes actin cytoskeletal reorganization potentially dependent on the activity of Rac1. Ascites allows the densification and reorganization of ECM proteins of the mesothelium, especially fibrinogen/fibrin, and indicates that it is a source of the fibrinogen and fibrin surrounding OC spheroids. The fibrin in ascites leads to the adhesion of OC spheroids to the mesothelium, and ascites promotes their disaggregation followed by the clearance of mesothelial cells. Both αV and α5β1 integrins are involved. In conclusion ascites and its fibrinogen/fibrin composition affects the integrity of the mesothelium and promotes the integrin-dependent implantation of OC spheroids in the mesothelium.
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  • 文章类型: Letter
    主动脉瘤和主动脉夹层(AAD)是严重的危及生命的心血管疾病,目前尚无批准的药物疗法。蛋白质S-亚硝基化(SNO)是一种典型的氧化还原依赖性翻译后修饰,其在AAD中的作用尚待描述。最近,张等人。首次揭示了巨噬细胞细胞骨架蛋白septin2的SNO修饰促进了主动脉瘤的血管炎症和细胞外基质降解。机械上,TIAM1-RAC1(T淋巴瘤侵袭和转移诱导蛋白1-Ras相关C3肉毒毒素底物1)轴参与了S-亚硝基化septin2诱导的AAD的进展。更重要的是,开发特异性靶向TIAM1-RAC1途径的R-酮咯酸和NSC23766化合物可能是缓解AAD的新的潜在策略。
    Aortic aneurysm and aortic dissection (AAD) are severe life-threatening cardiovascular disorders for which no approved pharmaceutical therapies are currently available. Protein S-nitrosylation (SNO) is a typical redox-dependent posttranslational modification whose role in AAD has yet to be described. Recently, Zhang et al. revealed for the first time that SNO modification of macrophage cytoskeletal protein septin2 promotes vascular inflammation and extracellular matrix degradation in aortic aneurysm. Mechanically, the TIAM1-RAC1(T lymphoma invasion and metastasis-inducing protein 1-Ras-related C3 botulinum toxin substrate 1) axis participates in the progression of AAD induced with S-nitrosylated septin2. More importantly, developing R-ketorolac and NSC23766 compounds that specifically target the TIAM1-RAC1 pathway may be new a potential strategy for alleviating AAD.
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  • 文章类型: Journal Article
    背景:肝细胞癌(HCC)是一种恶性肿瘤,患者的预后差异很大。Ras相关的C3肉毒杆菌毒素底物1(RAC1)是癌症研究领域的重点。然而,RAC1在HCC中的分子机制仍未完全阐明。
    方法:在本研究中,使用生物信息学分析,和公共数据库用于获取有关HCC病例的信息。根据RAC1基因的表达水平将样品分为高表达和低表达两组。使用limma包计算两组之间的差异表达基因,采用单因素Cox回归分析筛选预后相关因素。使用ConsensClusterPlus软件包进行共识聚类分析,以识别HCC患者的分子亚型。使用单样品基因集富集分析和ESTIMATE算法评估免疫细胞浸润和ESTIMATE评分。通过oncoPredict软件包预测了不同同工型对化学治疗剂的敏感性。最后,我们还进行了细胞功能实验,以验证RAC1在体外的生物学作用.最初,我们根据RAC1基因表达水平将患者分为高表达组和低表达组,并鉴定了195个上调基因和107个下调基因.通过单变量Cox回归分析,我们筛选出169个预后相关因素。此外,HCC患者分为两种亚型。随后,Kaplan-Meier生存曲线显示两种分子亚型之间的预后存在显着差异。进一步的分析表明,两种分子亚型之间的基因表达水平和TIDE评分存在实质性差异。此外,这两种亚型对化疗药物表现出不同的敏感性,IC50值的差异证明了这一点。此外,我们发现沉默RAC1可以有效抑制肝癌细胞的迁移和侵袭。
    结论:本研究揭示了HCC中RAC1的分子复杂性,并确定了可能受益于免疫治疗干预措施的患者人群。对量身定制的治疗策略有潜在的影响。
    BACKGROUND: Hepatocellular carcinoma (HCC) is a malignant tumor with significant variability in prognosis among patients. Ras-related C3 botulinum toxin substrate 1 (RAC1) is a key focus in the area of cancer research. However, the molecular mechanisms of RAC1 in HCC remain incompletely elucidated.
    METHODS: In this study, bioinformatics analysis was used, and public databases were used to obtain information about HCC cases. The samples were categorized into two groups of high and low expression based on the expression level of RAC1 gene. The limma package was used to calculate the differentially expressed genes between the two groups, and univariate Cox regression analysis was used to screen the prognostic related factors. Consensus clustering analysis was performed using the ConsensusClusterPlus package to identify molecular subtypes of HCC patients. Immune cell infiltration and ESTIMATE scores were assessed using the single sample gene set enrichment analysis and ESTIMATE algorithms. The sensitivity of different isoforms to chemotherapeutic agents was predicted by the oncoPredict package. Finally, we also performed cell function experiments to validate the biological role of RAC1 in vitro. Initially, we classified patients into high and low expression groups based on RAC1 gene expression levels and identified 195 up-regulated genes and 107 down-regulated genes. Through univariate Cox regression analysis, we screened out 169 prognosis-related factors. Furthermore, HCC patients were categorized into two subtypes. Subsequently, Kaplan-Meier survival curves showed that there was a significant difference in prognosis between the two molecular subtypes. Further analysis indicated substantial differences in gene expression levels and TIDE scores between two molecular subtypes. Moreover, these two subtypes exhibited varying sensitivity to chemotherapy drugs, as evidenced by differences in IC50 values. In addition, we found that the silence of RAC1 could effectively inhibit the migration and invasion of HCC cells in vitro.
    CONCLUSIONS: This study sheds light on the molecular intricacies of RAC1 in HCC and identifies patient populations that may benefit from immunotherapeutic interventions, with potential implications for tailored treatment strategies.
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