purine degradation

  • 文章类型: Journal Article
    嘌呤核苷酸对于RNA和DNA合成至关重要,信令,新陈代谢,和能量稳态。要合成嘌呤,细胞使用两种主要途径:从头途径和救助途径。传统上,据认为,增殖细胞主要依赖于从头合成,而分化的组织倾向于挽救途径。出乎意料的是,我们发现腺嘌呤和肌苷是向组织和肿瘤提供嘌呤核苷酸的最有效的循环前体,而次黄嘌呤在体内快速分解代谢且回收不良。定量代谢分析证明了从头合成和补救途径在维持肿瘤中嘌呤核苷酸库方面的比较贡献。值得注意的是,喂食小鼠核苷酸加速肿瘤生长,而抑制嘌呤挽救减缓肿瘤进展,揭示了挽救途径在肿瘤代谢中的关键作用。这些发现为正常组织和肿瘤如何维持嘌呤核苷酸提供了基本见解,并强调了嘌呤补救在癌症中的重要性。
    Purine nucleotides are vital for RNA and DNA synthesis, signaling, metabolism, and energy homeostasis. To synthesize purines, cells use two principal routes: the de novo and salvage pathways. Traditionally, it is believed that proliferating cells predominantly rely on de novo synthesis, whereas differentiated tissues favor the salvage pathway. Unexpectedly, we find that adenine and inosine are the most effective circulating precursors for supplying purine nucleotides to tissues and tumors, while hypoxanthine is rapidly catabolized and poorly salvaged in vivo. Quantitative metabolic analysis demonstrates comparative contribution from de novo synthesis and salvage pathways in maintaining purine nucleotide pools in tumors. Notably, feeding mice nucleotides accelerates tumor growth, while inhibiting purine salvage slows down tumor progression, revealing a crucial role of the salvage pathway in tumor metabolism. These findings provide fundamental insights into how normal tissues and tumors maintain purine nucleotides and highlight the significance of purine salvage in cancer.
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  • 文章类型: Journal Article
    妊娠期糖尿病(GDM)导致母婴产前和产后健康并发症的风险增加。代谢组学分析可以潜在地识别预测性生物标志物,并提供与GDM发病机制和进展相关的代谢改变的见解。但是很少有代谢组学研究调查在妊娠早期和晚期观察到的变化。我们假设,在妊娠早期GDM中改变的代谢物在妊娠晚期仍然改变可能是最好的干预措施。通过搜索PubMed检索比较GDM与非GDM妊娠中血浆和血清代谢物变化的代谢组学研究,Medline,和CINAHLPlus数据库。本范围综述总结了在整个GDM过程中发现的不断变化的代谢物,并提出了解释这些代谢扰动如何与GDM的发展和进展有关的机制。参与脂肪酸代谢的代谢物,还原性羧化,支链氨基酸代谢,细胞膜脂质代谢,嘌呤降解,发现在整个GDM怀孕期间,肠道微生物组发生了变化,其中许多途径显示了与胰岛素抵抗的机械联系,炎症,和受损的细胞信号。未来的研究需要调查这些干扰途径的正常化是否可以成为干预的目标。
    Gestational diabetes mellitus (GDM) results in an increased risk of pre- and postpartum health complications for both mother and child. Metabolomics analysis can potentially identify predictive biomarkers and provide insight into metabolic alterations associated with GDM pathogenesis and progression, but few metabolomics studies investigate alterations observed across the first and third trimester. We hypothesize that metabolites altered in first-trimester GDM that remain altered in late pregnancy may best inform interventions. Metabolomic studies comparing plasma and serum metabolite alterations in GDM vs non-GDM pregnancies were retrieved by searching PubMed, Medline, and CINAHL Plus databases. The present scoping review summarizes the metabolites found to be consistently altered throughout the course of GDM and proposes mechanisms that explain how these metabolic perturbations relate to GDM development and progression. Metabolites involved in fatty acid metabolism, reductive carboxylation, branched-chain amino acid metabolism, cell membrane lipid metabolism, purine degradation, and the gut microbiome were found to be altered throughout GDM pregnancies, with many of these pathways showing mechanistic links to insulin resistance, inflammation, and impaired cell signaling. Future studies are required to investigate if normalization of these perturbed pathways can be the targets of interventions.
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  • 文章类型: Journal Article
    目的:代谢组学作为一种解决生物学问题的方法,其应用呈指数级增长。因此,这是采用最佳做法的关键时刻。众所周知,破坏的组织氧供应迅速改变细胞能量电荷。然而,解剖后延迟的小鼠组织冷冻改变广泛代谢组的速度和程度没有很好的描述。此外,组织基因型如何调节这种代谢组学漂移以及追踪的13C同位素体分布可能发生变化的程度尚未得到解决.
    方法:通过结合液相色谱(LC)和气相色谱(GC)-质谱(MS),我们测量了255只小鼠肝脏代谢物的水平在30秒后如何变化,1分钟,3分钟,和10分钟的冻结延迟。然后,我们进行了概念测试延迟冻结实验,评估小鼠心脏和骨骼肌的广泛代谢组学漂移,野生型(WT)和线粒体丙酮酸载体(MPC)敲除小鼠肝脏之间的差异代谢组学变化,以及从13C标记的葡萄糖到小鼠肝脏的13C同位素丰度和富集的变化。
    结果:我们的数据表明,解剖后延迟的小鼠组织冷冻导致广泛代谢组的快速缺氧驱动重塑,诱导假阴性和假阳性基因型之间的差异,以及13C同位素分布的重组。值得注意的是,我们表明嘌呤核苷酸降解产物的增加是肝脏和心脏冷冻延迟的一个特别高的动态范围标记。
    结论:我们的发现提供了以前没有的,系统地说明了广泛的,在组织冷冻延迟的早期几分钟内发生的多结构域代谢组变化。他们还提供了一部小说,小鼠肝脏离体的详细资源,缺氧代谢组学重塑。
    Metabolomics as an approach to solve biological problems is exponentially increasing in use. Thus, this a pivotal time for the adoption of best practices. It is well known that disrupted tissue oxygen supply rapidly alters cellular energy charge. However, the speed and extent to which delayed mouse tissue freezing after dissection alters the broad metabolome is not well described. Furthermore, how tissue genotype may modulate such metabolomic drift and the degree to which traced 13C-isotopologue distributions may change have not been addressed.
    By combined liquid chromatography (LC)- and gas chromatography (GC)-mass spectrometry (MS), we measured how levels of 255 mouse liver metabolites changed following 30-second, 1-minute, 3-minute, and 10-minute freezing delays. We then performed test-of-concept delay-to-freeze experiments evaluating broad metabolomic drift in mouse heart and skeletal muscle, differential metabolomic change between wildtype (WT) and mitochondrial pyruvate carrier (MPC) knockout mouse livers, and shifts in 13C-isotopologue abundances and enrichments traced from 13C-labled glucose into mouse liver.
    Our data demonstrate that delayed mouse tissue freezing after dissection leads to rapid hypoxia-driven remodeling of the broad metabolome, induction of both false-negative and false-positive between-genotype differences, and restructuring of 13C-isotopologue distributions. Notably, we show that increased purine nucleotide degradation products are an especially high dynamic range marker of delayed liver and heart freezing.
    Our findings provide a previously absent, systematic illustration of the extensive, multi-domain metabolomic changes occurring within the early minutes of delayed tissue freezing. They also provide a novel, detailed resource of mouse liver ex vivo, hypoxic metabolomic remodeling.
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  • 文章类型: Journal Article
    高尿酸血症是由尿酸(UA)合成增加或UA排泄减少引起的代谢紊乱。饮食习惯的改变导致富含嘌呤食物的消费量增加,与高尿酸血症密切相关。因此,嘌呤吸收减少,UA排泄增加,降低UA合成是改善高尿酸血症的主要策略。本研究旨在筛选具有嘌呤降解能力的乳酸菌(LAB),并在高尿酸血症小鼠模型中研究其降低血清UA的作用。因此,从从发酵食品中分离出的22个LAB中选择了副干酪乳杆菌MJM60396,用于100%吸收肌苷和鸟苷。MJM60396显示出益生菌特性和安全特性。在动物研究中,口服MJM603963周后,血清尿酸显着降低至正常水平。黄嘌呤氧化酶的量,催化尿酸的形成,下降了81%,尿酸排泄的转运蛋白上调。组织病理学分析显示受损的肾小球,鲍曼胶囊,高尿酸血症引起的肾小管缓解。此外,受损的肠屏障恢复和紧密连接蛋白的表达,ZO-1和occludin,增加了。对微生物组的分析显示,在相对丰度的Muribaculaceae和Lachnospiaceae细菌,这与肠道屏障的完整性有关,在MJM60396组中增加。因此,这些结果表明,副干酪乳杆菌MJM60396可以通过吸收嘌呤以多种方式预防高尿酸血症,通过抑制黄嘌呤氧化酶降低UA合成,并通过调节尿酸转运蛋白增加UA排泄。
    Hyperuricemia is a metabolic disorder caused by increased uric acid (UA) synthesis or decreased UA excretion. Changes in eating habits have led to an increase in the consumption of purine-rich foods, which is closely related to hyperuricemia. Therefore, decreased purine absorption, increased UA excretion, and decreased UA synthesis are the main strategies to ameliorate hyperuricemia. This study aimed to screen the lactic acid bacteria (LAB) with purine degrading ability and examine the serum UA-lowering effect in a hyperuricemia mouse model. As a result, Lacticaseibacillus paracasei MJM60396 was selected from 22 LAB isolated from fermented foods for 100% assimilation of inosine and guanosine. MJM60396 showed probiotic characteristics and safety properties. In the animal study, the serum uric acid was significantly reduced to a normal level after oral administration of MJM60396 for 3 weeks. The amount of xanthine oxidase, which catalyzes the formation of uric acid, decreased by 81%, and the transporters for excretion of urate were upregulated. Histopathological analysis showed that the damaged glomerulus, Bowman\'s capsule, and tubules of the kidney caused by hyperuricemia was relieved. In addition, the impaired intestinal barrier was recovered and the expression of tight junction proteins, ZO-1 and occludin, was increased. Analysis of the microbiome showed that the relative abundance of Muribaculaceae and Lachnospiraceae bacteria, which were related to the intestinal barrier integrity, was increased in the MJM60396 group. Therefore, these results demonstrated that L. paracasei MJM60396 can prevent hyperuricemia in multiple ways by absorbing purines, decreasing UA synthesis by suppressing xanthine oxidase, and increasing UA excretion by regulating urate transporters.
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  • 文章类型: Journal Article
    尿酸是人体嘌呤代谢的最终产物。血尿酸升高与高尿酸血症和痛风的发生密切相关。此外,据报道,肉类和海鲜等富含嘌呤的食物的摄入与痛风风险增加有关。因此,减少嘌呤的吸收是预防高尿酸血症和痛风的治疗方法之一。目前,正在研究益生菌对高尿酸血症和痛风的治疗。在这项研究中,我们的目的是在小鼠模型中研究短乳杆菌MJM60390对高嘌呤饮食和草酸钾诱导的高尿酸血症的影响.L.brevisMJM60390在从发酵食品中分离的24种乳酸菌中显示出最高的体外同化肌苷和鸟苷的能力和典型的益生菌特性,比如缺乏生物胺的生产,D-乳酸生产,溶血活性,以及对模拟口胃肠道条件的耐受性和对Caco-2细胞的粘附性。在一项体内动物研究中,口服L.brevisMJM603902周后,血清尿酸水平显着降低至正常水平。催化尿酸形成的黄嘌呤氧化酶的活性也被抑制了30%。有趣的是,对肾小球的损伤,鲍曼胶囊,高尿酸血症模型中的小管通过补充该菌株而逆转。粪便微生物组分析显示,短乳杆菌MJM60390的补充增加了Rikenellaceae家族的相对丰度,它产生短链脂肪酸丁酸,有助于保持良好的肠道状态。因此,这些结果表明,短乳杆菌MJM60390可以成为预防高尿酸血症的益生菌候选物。
    Uric acid is the final product of purine metabolism in human. The increase of serum uric acid is tightly related to the incidence of hyperuricemia and gout. Also, it has been reported that the intake of purine-rich foods like meat and seafood is associated with an increased risk of gout. Therefore, the reduction of purine absorption is one of therapeutic approaches to prevent hyperuricemia and gout. Currently, probiotics are being studied for the management of hyperuricemia and gout. In this study, we aimed to investigate the effect of Lactobacillus brevis MJM60390 on hyperuricemia induced by a high-purine diet and potassium oxonate in a mouse model. L. brevis MJM60390 among 24 lactic acid bacteria isolated from fermented foods showed the highest ability to assimilate inosine and guanosine in vitro and typical probiotic characteristics, like the absence of bioamine production, D-lactate production, hemolytic activity, as well as tolerance to simulated orogastrointestinal conditions and adherence to Caco-2 cells. In an in vivo animal study, the uric acid level in serum was significantly reduced to a normal level after oral administration of L. brevis MJM60390 for 2 weeks. The activity of xanthine oxidase catalyzing the formation of uric acid was also inhibited by 30%. Interestingly, damage to the glomerulus, Bowman\'s capsule, and tubules in the hyperuricemia model were reversed by supplementation with this strain. Fecal microbiome analysis revealed that L. brevis MJM60390 supplementation enhanced the relative abundance of the Rikenellaceae family, which produces the short-chain fatty acid butyrate and helps to maintain good gut condition. Therefore, these results demonstrated that L. brevis MJM60390 can be a probiotic candidate to prevent hyperuricemia.
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  • 文章类型: Journal Article
    OBJECTIVE: Because of the evolutionary loss of the uricolytic pathway, humans accumulate poorly soluble urate as the final product of purine catabolism. Restoration of uricolysis through enzyme therapy is a promising treatment for severe hyperuricemia caused by deficiency of hypoxanthine-guanine phosphoribosyltransferase (HPRT). To this end, we studied the effect of PEG conjugation on the activity and stability of the enzymatic complement required for conversion of urate into the more soluble (S)-allantoin.
    METHODS: We produced in recombinant form three zebrafish enzymes required in the uricolytic pathway. We carried out a systematic study of the effect of PEGylation on the function and stability of the three enzymes by varying PEG length, chemistry and degree of conjugation. We assayed in vitro the uricolytic activity of the PEGylated enzymatic triad.
    RESULTS: We defined conditions that allow PEGylated enzymes to retain native-like enzymatic activity even after lyophilization or prolonged storage. A combination of the three enzymes in an appropriate ratio allowed efficient conversion of urate to (S)-allantoin with no accumulation of intermediate metabolites.
    CONCLUSIONS: Pharmaceutical restoration of the uricolytic pathway is a viable approach for the treatment of severe hyperuricemia.
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  • 文章类型: Journal Article
    显然是最近细菌来源的DNA存在于空想症和雷曼氏线虫的基因组序列中。在这里,我们提供了DNA属于白杆菌属(高GC革兰氏放线菌)的单个物种的证据。宏基因组工具能够在3.2Mb的基因组草图中组装污染序列,该基因组包含2,826个基因。此信息提供了对与秀丽隐杆线虫密切相关的微生物的深入了解,并为将公共数据库中的3,373个后生动物条目重新分配给新型细菌物种(Leucobactersp。AEAR).因此,宏基因组技术的应用可以防止注释错误,并在常规基因组学获得的数据中揭示意外的遗传信息。
    DNA of apparently recent bacterial origin is found in the genomic sequences of Caenorhabditis angaria and Caenorhabditis remanei. Here we present evidence that the DNA belongs to a single species of the genus Leucobacter (high-GC Gram+ Actinobacteria). Metagenomic tools enabled the assembly of the contaminating sequences in a draft genome of 3.2 Mb harboring 2,826 genes. This information provides insight into a microbial organism intimately associated with Caenorhabditis as well as a solid basis for the reassignment of 3,373 metazoan entries of the public database to a novel bacterial species (Leucobacter sp. AEAR). The application of metagenomic techniques can thus prevent annotation errors and reveal unexpected genetic information in data obtained by conventional genomics.
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