purine bases

  • 文章类型: Journal Article
    嘌呤核苷酸对于RNA和DNA合成至关重要,信令,新陈代谢,和能量稳态。要合成嘌呤,细胞使用两种主要途径:从头途径和救助途径。传统上,据认为,增殖细胞主要依赖于从头合成,而分化的组织倾向于挽救途径。出乎意料的是,我们发现腺嘌呤和肌苷是向组织和肿瘤提供嘌呤核苷酸的最有效的循环前体,而次黄嘌呤在体内快速分解代谢且回收不良。定量代谢分析证明了从头合成和补救途径在维持肿瘤中嘌呤核苷酸库方面的比较贡献。值得注意的是,喂食小鼠核苷酸加速肿瘤生长,而抑制嘌呤挽救减缓肿瘤进展,揭示了挽救途径在肿瘤代谢中的关键作用。这些发现为正常组织和肿瘤如何维持嘌呤核苷酸提供了基本见解,并强调了嘌呤补救在癌症中的重要性。
    Purine nucleotides are vital for RNA and DNA synthesis, signaling, metabolism, and energy homeostasis. To synthesize purines, cells use two principal routes: the de novo and salvage pathways. Traditionally, it is believed that proliferating cells predominantly rely on de novo synthesis, whereas differentiated tissues favor the salvage pathway. Unexpectedly, we find that adenine and inosine are the most effective circulating precursors for supplying purine nucleotides to tissues and tumors, while hypoxanthine is rapidly catabolized and poorly salvaged in vivo. Quantitative metabolic analysis demonstrates comparative contribution from de novo synthesis and salvage pathways in maintaining purine nucleotide pools in tumors. Notably, feeding mice nucleotides accelerates tumor growth, while inhibiting purine salvage slows down tumor progression, revealing a crucial role of the salvage pathway in tumor metabolism. These findings provide fundamental insights into how normal tissues and tumors maintain purine nucleotides and highlight the significance of purine salvage in cancer.
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  • 文章类型: Journal Article
    在这项工作中,使用1,3,5-(4-氨基苯基)苯(TAPB)和2,5-二甲氧基-对-苯基二甲醛(DMTP)成功合成了具有高结晶度和大比表面积(2597m2g-1)的共价有机骨架(TADM-COF)。COF在氧化物颗粒上原位生长,形成核壳纳米复合材料(SiO2@TADMCOF,Fe3O4@TADMCOF和Co3O4@TADMCOF)实现其作为壳材料的功能。其中,将对嘌呤碱具有最高电化学响应的Co3O4@TADMCOF与多壁碳纳米管(MWCNT)进一步交联,构建了用于检测嘌呤碱的新型电化学传感器(Co3O4@TADMCOF/MWCNT/GCE)。在这种纳米复合材料中,Co3O4具有丰富的催化活性位点,MWCNT确保优异的导电性,并且COF作为壳为电催化反应提供稳定的环境。同时,COF的规则孔结构还为分析物转移到催化位点提供了平滑的通道。三种成分之间的协同作用显示了同时检测鸟嘌呤(G)和腺嘌呤(A)的显着传感性能,具有0.6-180μM的宽线性范围和0.020μM的低检测限(LODs)G和0.024μM的A(S/N=3),分别。所开发的传感器平台还成功地应用于热变性鲱鱼DNA提取物中嘌呤碱基的检测。该工作为在电化学传感中放大COF及其复合材料的信号提供了一般策略。
    In this work, a covalent organic framework (TADM-COF) with high crystallinity and large specific surface area (2597 m2 g-1) has been successfully synthesized using 1,3,5-(4-aminophenyl) benzene (TAPB) and 2,5-dimethoxy-p-phenyldiformaldehyde (DMTP). The COF was grown in situ on oxide particles to form core-shell nanocomposites (SiO2@TADM COF, Fe3O4@TADM COF and Co3O4@TADM COF) to realize its function as a shell material. Among them, the Co3O4@TADM COF with the highest electrochemical response to purine bases was further cross-linked with multi-walled carbon nanotubes (MWCNT) to construct a novel electrochemical sensor (Co3O4@TADM COF/MWCNT/GCE) for detection of purine bases. In this nanocomposite, Co3O4 possesses rich catalytic active sites, MWCNT ensures superior electrical conductivity and COF provides a stable environment for electrocatalytic reactions as the shell. At the same time, regular pore structure of the COFs also offers smooth channels for the transfer of analytes to the catalytic site. The synergistic effect among the three components showed remarkable sensing performance for the simultaneous detection of guanine (G) and adenine (A) with a wide linear range of 0.6-180 μM and low limits of detection (LODs) of 0.020 μM for G and 0.024 μM for A (S/N = 3), respectively. The developed sensor platform was also successfully applied in the detection of purine bases in thermally denatured herring DNA extract. The work provided a general strategy for amplifying signal of COF and its composite in the electrochemical sensing.
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  • 文章类型: Journal Article
    提出简便、灵敏的DNA碱基检测方法对生物分析和医学诊断具有重要意义。在这里,通过使用均苯四甲酸二酐(PMDA)和三(4-氨基苯基)胺(TAPA)的溶剂热法成功合成了高度结晶的聚酰亚胺共价有机骨架(TAPM-COF),具有较大的比表面积(2286m2g-1)和优异的热稳定性。有趣的是,随着反应介质中含水量的增加,TAPM-COF的结晶度显著提高。为了验证这种现象,我们通过均苯四甲酸二酐(PMDA)和N,N,N\',N'-四(4-氨基苯基)-1,4-苯二胺(TPDA),该结合类似于TAPM-COF。此外,制备的TAPM-COF-0.3用于在玻碳电极上构建一种新型的独立电化学生物传感器,用于在不添加其他添加剂的情况下同时测定腺嘌呤(A)和鸟嘌呤(G)。然而,为了进一步提高TAPM-COF在电化学传感中的信号,结晶TAPM-COF-0.3可以容易地与氨基官能化的多壁碳纳米管(NH2-MWCNT)整合以形成由π-π堆叠相互作用驱动的核-壳TAPM-COF-0.3@NH2-MWCNT,用于对嘌呤碱更灵敏的电化学传感。与TAPM-COF/GCE相比,TAPM-COF@NH2-MWCNT/GCE具有较好的线性范围和较低的检测限。该工作为电化学传感器领域的COF信号放大提供了一种新的策略。
    It is of great significance to propose simple methods to detect DNA bases sensitively for biological analysis and medical diagnosis. Herein, a highly crystalline polyimide covalent organic framework (TAPM-COF) has been successfully synthesized via a solvothermal route using pyromellitic dianhydride (PMDA) and tris(4-aminophenyl) amine (TAPA), which possessed large specific surface area (2286 m2 g-1) and excellent thermal stability. Intriguingly, the crystallinity of the TAPM-COF improved significantly with the increase of water content in the reaction medium. To verify this phenomenon, we synthesized TPPM-COF with two pores by pyromellitic dianhydride (PMDA) and N,N,N\',N\'-tetrakis(4-aminophenyl)-1,4-benzenediamine (TPDA), which bonding was similar to TAPM-COF. Furthermore, the prepared TAPM-COF-0.3 was used to construct a novel and independent electrochemical biosensor on glassy carbon electrode for simultaneously determination of adenine (A) and guanine (G) without other additives. However, to further improve signal of TAPM-COF in electrochemical sensing, the crystalline TAPM-COF-0.3 can be readily integrated with amino-functionalized multiwalled carbon nanotubes (NH2-MWCNT) to form core-shell TAPM-COF-0.3@NH2-MWCNT driven by a π-π stacking interaction for more sensitive electrochemical sensing toward purine bases. In comparison to TAPM-COF/GCE, the TAPM-COF@NH2-MWCNT/GCE exhibited more favorable linear range and lower limit of detection. The work provided a new strategy for amplifying signal of COF in the field of electrochemical sensors.
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  • 文章类型: Journal Article
    含有修饰的核碱基的寡核苷酸在各种技术中具有应用。总的来说,合成具有不同核碱基结构的寡核苷酸,每个修饰的亚磷酰胺单体需要经过多个步骤制备,然后引入到寡核苷酸上,这是耗时且低效的。合成后修饰是制备许多类型的修饰寡核苷酸的有力策略,尤其是核碱基修饰的。根据修改的阶段,后合成改性可分为两个阶段:“固相改性,“其中寡核苷酸连接到树脂上,和“溶液相修改”,“其中寡核苷酸自身与树脂分离。在这次审查中,我们专注于溶液中的合成后修饰,用于合成核碱基修饰的寡核苷酸,除了用于缀合的接头的修饰。此外,总结了核碱基的每个修饰位置的反应。
    Oligonucleotides containing modified nucleobases have applications in various technologies. In general, to synthesize oligonucleotides with different nucleobase structures, each modified phosphoramidite monomer needs to be prepared over multiple steps and then introduced onto the oligonucleotides, which is time-consuming and inefficient. Post-synthetic modification is a powerful strategy for preparing many types of modified oligonucleotides, especially nucleobase-modified ones. Depending on the stage of modification, post-synthetic modification can be divided into two stages: \"solid-phase modification,\" wherein an oligonucleotide attaches to the resin, and \"solution-phase modification,\" wherein an oligonucleotide detaches itself from the resin. In this review, we focus on post-synthetic modification in solution for the synthesis of nucleobase-modified oligonucleotides, except the modifications to linkers for conjugation. Moreover, the reactions are summarized for each modified position of the nucleobases.
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  • 文章类型: Journal Article
    Abiotic synthesis of nucleobases and amino acids is of critical importance as it sheds light on potential prebiotic chemical reactions. During thermal decomposition of formamide in vacuum conditions, purine, cytosine, adenine, hypoxanthine, uracil, pterin, urea, urocanic acid, glycine, alanine and norvaline were detected. The compounds were obtained without catalyst by heating at 100-180 °C or microwave heating of formamide. Reaction network of self-catalyzed chemical reactions is suggested, showing how from only one parent molecule, nucleobases, urea and the amino acid glycine can be produced. The reaction pathways are theoretically determined using SCS-MP2 calculations.Communicated by Ramaswamy H. Sarma.
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  • 文章类型: Journal Article
    Introducing purine bases to P2-ligands might enhance the potency of Human Immunodeficiency Virus-1 (HIV-1) protease inhibitory because of the carbonyl and NH groups promoting the formation of extensive H-bonding interactions. In this work, thirty-three compounds are synthesized and evaluated, among which inhibitors 16a, 16f and 16j containing N-2-(6-substituted-9H-purin-9-yl)acetamide as the P2-ligands along with 4-methoxylphenylsulfonamide as the P2\'-ligand, display potent inhibitory effect on the activity of HIV-1 protease with IC50 43 nM, 42 nM and 68 nM in vitro, respectively.
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