phenotypic switching

表型转换
  • 文章类型: Journal Article
    腹主动脉瘤(AAA)是一种威胁生命的疾病,其特征是血管壁广泛的膜破坏,与血管平滑肌细胞(VSMC)表型转换密切相关。彻底了解VSMC表型转换过程中调节因子的变化对于管理AAA治疗至关重要。在这项研究中,我们基于单细胞RNA测序分析揭示了NRF2对VSMC表型调节和AAA发展的影响.利用VSMC特异性敲除核因子E2相关因子2(NRF2)的小鼠模型,我们观察到,在血管紧张素II诱导的AAA模型中,VSMC中NRF2缺失会加剧AAA的形成.NRF2的下调促进了VSMC表型转换,导致炎症反应增强。通过全基因组转录组分析和功能缺失或获得实验,我们发现NRF2通过促进microRNA-145(miR-145)表达上调VSMC收缩表型特异性基因的表达.我们的数据确定NRF2是一种新型调节因子,参与维持VSMC收缩表型,同时也通过miR-145依赖性调节机制影响AAA形成。
    Abdominal aortic aneurysm (AAA) is a life-threatening disease characterized by extensive membrane destruction in the vascular wall that is closely associated with vascular smooth muscle cell (VSMC) phenotypic switching. A thorough understanding of the changes in regulatory factors during VSMC phenotypic switching is essential for managing AAA therapy. In this study, we revealed the impact of NRF2 on the modulation of VSMC phenotype and the development of AAA based on single-cell RNA sequencing analysis. By utilizing a murine model of VSMC-specific knockout of nuclear factor E2-related factor 2 (NRF2), we observed that the absence of NRF2 in VSMCs exacerbated AAA formation in an angiotensin II-induced AAA model. The downregulation of NRF2 promoted VSMC phenotypic switching, leading to an enhanced inflammatory response. Through genome-wide transcriptome analysis and loss- or gain-of-function experiments, we discovered that NRF2 upregulated the expression of VSMC contractile phenotype-specific genes by facilitating microRNA-145 (miR-145) expression. Our data identified NRF2 as a novel regulator involved in maintaining the VSMC contractile phenotype while also influencing AAA formation through an miR-145-dependent regulatory mechanism.
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  • 文章类型: Journal Article
    易损动脉粥样硬化斑块破裂,致命的动脉粥样硬化血栓事件的主要原因,与全球死亡风险增加有关。过氧化物酶体增殖物激活受体δ(PPARδ)已被证明可以调节血管平滑肌细胞(SMC)表型转换,and,因此,动脉粥样硬化斑块稳定性。据报道,褪黑素在心血管疾病中起着有益的作用;然而,动脉粥样硬化斑块易损性改善的潜在机制尚不清楚.在这项研究中,我们评估了褪黑素在调节SMC表型转换中的作用及其对改善动脉粥样硬化斑块易损性的作用,并探讨了这一过程的潜在机制.我们分析了高胆固醇饮食(HCD)喂养的载脂蛋白E敲除(ApoE-/-)小鼠和人主动脉SMC(HASMC)的动脉粥样硬化斑块易损性特征和SMC表型转变标志物。褪黑素减少动脉粥样硬化斑块大小和坏死核心区域,同时增加胶原含量,纤维帽厚度,平滑肌α-肌动蛋白阳性细胞覆盖在斑块上,这些都是已知的易损斑块的表型特征。在动脉粥样硬化病变中,褪黑素显著降低合成SMC表型和KLF4的表达,增加PPARδ的表达,但不是PPARα和PPARγ,在HCD喂养的ApoE-/-小鼠中。这些结果随后在褪黑激素处理的HASMC中得到证实。使用PPARδ沉默和免疫沉淀测定的进一步分析表明,PPARδ在褪黑激素诱导的SMC表型从合成转换为收缩转换中起作用。总的来说,我们提供了第一个证据表明,褪黑激素通过增强PPARδ介导的SMC表型转换来介导其对斑块失稳的保护作用,从而表明褪黑素治疗动脉粥样硬化的潜力。
    Vulnerable atherosclerotic plaque rupture, the leading cause of fatal atherothrombotic events, is associated with an increased risk of mortality worldwide. Peroxisome proliferator-activated receptor delta (PPARδ) has been shown to modulate vascular smooth muscle cell (SMC) phenotypic switching, and, hence, atherosclerotic plaque stability. Melatonin reportedly plays a beneficial role in cardiovascular diseases; however, the mechanisms underlying improvements in atherosclerotic plaque vulnerability remain unknown. In this study, we assessed the role of melatonin in regulating SMC phenotypic switching and its consequential contribution to the amelioration of atherosclerotic plaque vulnerability and explored the mechanisms underlying this process. We analyzed features of atherosclerotic plaque vulnerability and markers of SMC phenotypic transition in high-cholesterol diet (HCD)-fed apolipoprotein E knockout (ApoE-/-) mice and human aortic SMCs (HASMCs). Melatonin reduced atherosclerotic plaque size and necrotic core area while enhancing collagen content, fibrous cap thickness, and smooth muscle alpha-actin positive cell coverage on the plaque cap, which are all known phenotypic characteristics of vulnerable plaques. In atherosclerotic lesions, melatonin significantly decreased the synthetic SMC phenotype and KLF4 expression and increased the expression of PPARδ, but not PPARα and PPARγ, in HCD-fed ApoE-/- mice. These results were subsequently confirmed in the melatonin-treated HASMCs. Further analysis using PPARδ silencing and immunoprecipitation assays revealed that PPARδ plays a role in the melatonin-induced SMC phenotype switching from synthetic to contractile. Collectively, we provided the first evidence that melatonin mediates its protective effect against plaque destabilization by enhancing PPARδ-mediated SMC phenotypic switching, thereby indicating the potential of melatonin in treating atherosclerosis.
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  • 文章类型: Journal Article
    集体细胞迁移的一个基本特征是表型异质性,例如影响肿瘤进展和复发。虽然当前的数学模型通常考虑细胞群体的离散表型结构,与“发展或增长”假设一致(Hatzikirou等人。,2012;Stepien等人。,2018),他们经常忽视环境在决定细胞迁移过程中表型的作用。比较先前研究的体积填充模型,用于可以增殖的同质通才细胞群,移动和降解细胞外基质(ECM)(Crossley等人。,2023)到一个异质群体的新模型,该模型包含两个不同的专门细胞亚群,它们可以移动和降解ECM或增殖,本研究探讨了不同的假设表型转换机制如何影响入侵细胞群的速度和结构。通过从其基于个体的对应物中导出的连续模型,对ECM的影响和表型转换对迁移细胞群的影响的见解出现了。值得注意的是,与通才细胞群相比,不能转换表型的专业细胞群显示出降低的侵袭性,而实施不同形式的切换会显著改变迁移细胞前沿的结构。这一关键结果表明,入侵细胞群的结构可用于推断控制表型转换的潜在机制。
    A fundamental feature of collective cell migration is phenotypic heterogeneity which, for example, influences tumour progression and relapse. While current mathematical models often consider discrete phenotypic structuring of the cell population, in-line with the \'go-or-grow\' hypothesis (Hatzikirou et al., 2012; Stepien et al., 2018), they regularly overlook the role that the environment may play in determining the cells\' phenotype during migration. Comparing a previously studied volume-filling model for a homogeneous population of generalist cells that can proliferate, move and degrade extracellular matrix (ECM) (Crossley et al., 2023) to a novel model for a heterogeneous population comprising two distinct sub-populations of specialist cells that can either move and degrade ECM or proliferate, this study explores how different hypothetical phenotypic switching mechanisms affect the speed and structure of the invading cell populations. Through a continuum model derived from its individual-based counterpart, insights into the influence of the ECM and the impact of phenotypic switching on migrating cell populations emerge. Notably, specialist cell populations that cannot switch phenotype show reduced invasiveness compared to generalist cell populations, while implementing different forms of switching significantly alters the structure of migrating cell fronts. This key result suggests that the structure of an invading cell population could be used to infer the underlying mechanisms governing phenotypic switching.
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  • 文章类型: Journal Article
    白色念珠菌通过复杂的转换机制部署各种形态形式,确保其作为共生或病原体在截然不同的人类生态位中生存和繁荣。在这项研究中,我们证明了一种新颖的\'\'杆\'\''形态形式的白色念珠菌共存,并且与先前报道的白色可互换,灰色,和不透明的形式,构成四稳定的表型转换系统。棒细胞来自SC5314细胞的efg1突变体或来自在无葡萄糖条件下培养的临床BJ1097菌株。它们的特征在于不同的基因表达谱,并且可以通过小鼠胃肠道(GI)的体外传代或体内居住而稳定维持。值得注意的是,大多数efg1突变细胞在含N-乙酰葡糖胺(GlcNAc)的培养基中成为视杆细胞,GlcNAc传感器Ngs1有助于将白色或灰色细胞转换为视杆细胞。相反,葡萄糖通过Cph1抑制视杆细胞;因此,efg1突变细胞中Cph1的丢失允许它们在葡萄糖充足的培养基中转化为视杆细胞。值得注意的是,efg1/cph1突变体的视杆细胞在鼠GI环境中显示出比野生型白细胞更好的适应性和更长的持久性。一起来看,这些发现将杆状细胞确立为以前未被重视的形式,不仅在形态和转录上可区分,而且由特定的遗传和环境决定子定义,揭示复杂的真菌-宿主相互作用。
    Candida albicans deploys various morphological forms through complex switching mechanisms, ensuring its survival and thriving as a commensal or pathogen in vastly different human niches. In this study, we demonstrate that a novel \'\'rod\'\' morphological form of C. albicans coexists and is interchangeable with previously reported white, gray, and opaque forms, constituting a tetra-stable phenotypic switching system. Rod cells arise from the efg1 mutant of SC5314 cells or from the clinical BJ1097 strain cultured under glucose-free conditions. They are characterized by a distinct gene expression profile and can be stably maintained through in vitro passaging or in vivo inhabitation of the gastrointestinal (GI) tract of mice. Remarkably, the majority of the efg1 mutant cells become rod cells in N-acetylglucosamine (GlcNAc)-containing medium, and the GlcNAc sensor Ngs1 is instrumental in converting the white or gray cells to the rod cells. Conversely, glucose inhibits rod cells through Cph1; consequently, the loss of Cph1 in the efg1 mutantcells permits their conversion to rod cells in glucose-replete media. Notably, rod cells of the efg1/ cph1 mutant display superior adaptation and longer persistence in the murine GI environment than wild-type white cells. Taken together, these findings establish rod cells as a previously unappreciated form that is not only morphologically and transcriptionally distinguishable but also defined by specific genetic and environmental determinants, shedding light on complex fungus-host interactions.
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  • 文章类型: Journal Article
    雌激素被认为具有减缓衰老和保护心血管和认知功能的作用。然而,高剂量的雌激素仍然与自身免疫性疾病和系统性炎症的肿瘤呈正相关。首先,我们连续3个月给予雌性小鼠外源性雌激素,发现雌激素作用下的小鼠主动脉出现类似于大动脉炎(TAK)的炎症表现.然后,对小鼠主动脉血管平滑肌细胞(MOVAS细胞)进行体外雌激素干预。在高浓度雌二醇的刺激下,MOVAS细胞显示收缩表型标志物的表达减少,巨噬细胞样表型标志物的表达增加。这种转变被他莫昔芬和Krüppel样因子4(KLF4)抑制剂阻断,并被VonHippel-Lindau(VHL)/缺氧诱导因子-1α(HIF-1α)相互作用抑制剂增强。这表明VHL/HIF-1α/KLF4轴的雌激素靶向调节诱导血管平滑肌细胞(VSMC)的表型转化。此外,雌激素调节的VSMC向巨噬细胞的表型转化是雌激素诱导的血管炎症的关键机制,这证明了临床使用雌激素替代疗法的风险。
    Estrogen is thought to have a role in slowing down aging and protecting cardiovascular and cognitive function. However, high doses of estrogen are still positively associated with autoimmune diseases and tumors with systemic inflammation. First, we administered exogenous estrogen to female mice for three consecutive months and found that the aorta of mice on estrogen develops inflammatory manifestations similar to Takayasu arteritis (TAK). Then, in vitro estrogen intervention was performed on mouse aortic vascular smooth muscle cells (MOVAS cells). Stimulated by high concentrations of estradiol, MOVAS cells showed decreased expression of contractile phenotypic markers and increased expression of macrophage-like phenotypic markers. This shift was blocked by tamoxifen and Krüppel-like factor 4 (KLF4) inhibitors and enhanced by Von Hippel-Lindau (VHL)/hypoxia-inducible factor-1α (HIF-1α) interaction inhibitors. It suggests that estrogen-targeted regulation of the VHL/HIF-1α/KLF4 axis induces phenotypic transformation of vascular smooth muscle cells (VSMC). In addition, estrogen-regulated phenotypic conversion of VSMC to macrophages is a key mechanism of estrogen-induced vascular inflammation, which justifies the risk of clinical use of estrogen replacement therapy.
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  • 文章类型: Journal Article
    脓肿分枝杆菌(Mab)感染在囊性纤维化(CF)等慢性肺部疾病患者中可能致命。在体外和体内,Mab可以采用光滑(S)或粗糙(R)形态,后者与更严重的疾病状况有关。体外研究表明,对S和R形态的致病性和免疫反应存在差异。我们建议在体内两种形态类型都存在,并且可能会根据环境而暂时切换,具有重要的致病和免疫后果。这可以通过基于体外生长条件选择的Mab的形态型S和R变体来建模。这里,我们报道了首次分析小鼠骨髓源性巨噬细胞(BMDMs)感染培养基选择的可互换的Mab-S和Mab-R形态类型后的早期转录事件.两种形态类型感染后的早期转录事件显示与未感染的巨噬细胞相比差异调节的促炎基因的相当大的重叠。我们还观察到在培养基选择的形态型Mab-S和Mab-R变体感染期间在巨噬细胞中显著差异调节的特征基因。总之,在发病机制和免疫反应方面,培养基选择的Mab-S和Mab-R的行为与稳定的S和R类型相似。作为环境影响形态类型选择的有用模型。
    Mycobacterium abscessus (Mab) infection can be deadly in patients with chronic lung diseases like cystic fibrosis (CF). In vitro and in vivo, Mab may adopt a smooth (S) or rough (R) morphotype, the latter linked to more severe disease conditions. In vitro studies revealed differences in pathogenicity and immune response to S and R morphotypes. We propose that in vivo both morphotypes exist and may transiently switch depending on the environment, having important pathogenic and immunologic consequences. This can be modeled by morphotypic S and R variants of Mab selected based on in vitro growth conditions. Here, we report the first analysis of early transcriptional events in mouse bone marrow derived macrophages (BMDMs) upon infection with media-selected interchangeable Mab-S and Mab-R morphotypes. The early transcriptional events after infection with both morphotypes showed considerable overlap of the pro-inflammatory genes that were differentially regulated compared to the uninfected macrophages. We also observed signature genes significantly differentially regulated in macrophages during infection of media-selected morphotypic Mab-S and Mab-R variants. In conclusion, media-selected Mab-S and Mab-R behave in a similar fashion to stable S and R types with respect to pathogenesis and immune response, serving as a useful model for environmentally influenced morphotype selection.
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  • 文章类型: Journal Article
    背景:血管平滑肌细胞(VSMC)功能失调导致多种疾病,如动脉粥样硬化和损伤后增生。然而,靶向VSMC的抗增殖药物表现出较差的特异性。因此,迫切需要开发高度特异性的抗增殖药物来预防和治疗VSMC去分化相关的动脉硬化。康乐欣(KLX),我们团队设计的一种新的蒽醌化合物,具有根据理化性质调节VSMC表型的潜力。
    目的:该项目旨在评估KLX在VSMC去分化和动脉粥样硬化中的治疗作用,新内膜形成并说明了潜在的分子机制。
    方法:体内,用高脂饮食(HFD)喂养ApoE-/-小鼠,持续13周,建立动脉粥样硬化模型.采用大鼠颈动脉损伤模型建立新生内膜形成模型。体外,PDGF-BB用于诱导VSMC去分化。
    结果:我们发现KLX改善了动脉粥样硬化的进展,包括动脉粥样硬化病变的形成,动脉粥样硬化小鼠模型主动脉和主动脉窦中的脂质沉积和胶原沉积。此外,KLX的给药有效地改善了SD大鼠球囊损伤后颈动脉中的新内膜形成。来自分子对接和表面等离子体共振(SPR)实验的发现明确表明,KLX具有结合PDGFR-β的潜力。研究工作证明,KLX阻止VSMC增殖,通过激活PDGFR-β-MEK-ERK-ELK-1/KLF4信号通路进行迁移和去分化。
    结论:总的来说,我们证明,KLX通过抑制PDGFR-β-MEK-ERK-ELK-1/KLF4信号传导的VSMC表型转化,有效地减弱了ApoE-/-小鼠动脉粥样硬化的进展和SD大鼠颈动脉新内膜的形成。KLX显示出作为治疗VSMC表型转化相关动脉硬化的可行治疗剂的有希望的潜力。
    BACKGROUND: Dysregulation of vascular smooth muscle cell (VSMC) function leads to a variety of diseases such as atherosclerosis and hyperplasia after injury. However, antiproliferative drug targeting VSMC exhibits poor specificity. Therefore, there is an urgent to develop highly specific antiproliferative drugs to prevention and treatment VSMC dedifferentiation associated arteriosclerosis. Kanglexin (KLX), a new anthraquinone compound designed by our team, has potential to regulate VSMC phenotype according to the physicochemical properties.
    OBJECTIVE: This project aims to evaluate the therapeutic role of KLX in VSMC dedifferentiation and atherosclerosis, neointimal formation and illustrates the underlying molecular mechanism.
    METHODS: In vivo, the ApoE-/- mice were fed with high-fat diet (HFD) for a duration of 13 weeks to establish the atherosclerotic model. And rat carotid artery injury model was performed to establish the neointimal formation model. In vitro, PDGF-BB was used to induce VSMC dedifferentiation.
    RESULTS: We found that KLX ameliorated the atherosclerotic progression including atherosclerotic lesion formation, lipid deposition and collagen deposition in aorta and aortic sinus in atherosclerotic mouse model. In addition, The administration of KLX effectively ameliorated neointimal formation in the carotid artery following balloon injury in SD rats. The findings derived from molecular docking and surface plasmon resonance (SPR) experiments unequivocally demonstrate that KLX had potential to bind PDGFR-β. Mechanism research work proved that KLX prevented VSMC proliferation, migration and dedifferentiation via activating the PDGFR-β-MEK -ERK-ELK-1/KLF4 signaling pathway.
    CONCLUSIONS: Collectively, we demonstrated that KLX effectively attenuated the progression of atherosclerosis in ApoE-/- mice and carotid arterial neointimal formation in SD rats by inhibiting VSMC phenotypic conversion via PDGFR-β-MEK-ERK-ELK-1/KLF4 signaling. KLX exhibits promising potential as a viable therapeutic agent for the treatment of VSMC phenotype conversion associated arteriosclerosis.
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  • 文章类型: Journal Article
    背景:五甲基槲皮素(PMQ)是一种具有抗凋亡和其他生物学特性的天然多甲基类黄酮。腹主动脉瘤(AAA),一种具有高破裂风险的致命血管疾病,与内侧血管平滑肌细胞(VSMC)的表型转换和凋亡有关。本研究旨在探讨PMQ对AAA发生发展的保护作用及其机制。
    方法:ApoE-/-小鼠连续输注血管紧张素II(AngII)4周以建立AAA模型。在AngII输注前5天开始胃内给药PMQ,并持续4周。体外,培养VSMC并用PMQ预处理,用AngII刺激。实时PCR,西方印迹,免疫荧光染色检测PMQ在VSMCs表型转换和凋亡中的作用及机制。
    结果:PMQ剂量依赖性地降低了AngII诱导的AAA的发生率,动脉瘤直径扩大,弹性蛋白降解,VSMCs表型转换和凋亡。此外,PMQ还抑制AngII刺激的VSMC中的表型转换和凋亡。PMQ通过调节C/EBPβ/PTEN/AKT/GSK-3β轴发挥保护作用。AAV介导的PTEN过表达降低了PMQ在AAA模型小鼠中的治疗作用,提示PMQ对AngII介导的AAA形成的影响与PTEN/AKT/GSK-3β轴有关。PMQ通过在Lys253处以氢键结合C/EBPβ来调节C/EBPβ核易位和PTEN/AKT/GSK-3β轴,从而抑制VSMCs表型转换和凋亡,从而抑制AngII诱导的AAA形成。
    结论:五甲基槲皮素通过在Lys253处与C/EBPβ结合而抑制血管紧张素II诱导的腹主动脉瘤形成。因此,PMQ防止AAA的形成并降低AAA的发生率。
    BACKGROUND: Pentamethylquercetin (PMQ) is a natural polymethyl flavonoid that possesses anti-apoptotic and other biological properties. Abdominal aortic aneurysm (AAA), a fatal vascular disease with a high risk of rupture, is associated with phenotypic switching and apoptosis of medial vascular smooth muscle cells (VSMCs). This study aimed to investigate the protective effects of PMQ on the development of AAA and the underlying mechanism.
    METHODS: ApoE-/- mice were continuously infused with angiotensin II (Ang II) for 4 weeks to develop the AAA model. Intragastric administration of PMQ was initiated 5 days before Ang II infusion and continued for 4 weeks. In vitro, VSMCs were cultured and pretreated with PMQ, stimulated with Ang II. Real-time PCR, western blotting, and immunofluorescence staining were used to examine the roles and mechanisms of PMQ on the phenotypic switching and apoptosis of VSMCs.
    RESULTS: PMQ dose-dependently reduced the incidence of Ang II-induced AAA, aneurysm diameter enlargement, elastin degradation, VSMCs phenotypic switching and apoptosis. Furthermore, PMQ also inhibited phenotypic switching and apoptosis in Ang II-stimulated VSMCs. PMQ exerted protective effects by regulating the C/EBPβ/PTEN/AKT/GSK-3β axis. AAV-mediated overexpression of PTEN reduced the therapeutic effects of PMQ in the AAA model mice, suggesting that the effects of PMQ on Ang II-mediated AAA formation were related to the PTEN/AKT/GSK-3β axis. PMQ inhibited VSMCs phenotypic switching and apoptosis by bounding to C/EBPβ at Lys253 with hydrogen bond to regulate C/EBPβ nuclear translocation and PTEN/AKT/GSK-3β axis, thereby inhibiting Ang II-induced AAA formation.
    CONCLUSIONS: Pentamethylquercetin inhibits angiotensin II-induced abdominal aortic aneurysm formation by bounding to C/EBPβ at Lys253. Therefore, PMQ prevents the formation of AAA and reduces the incidence of AAA.
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  • 文章类型: Journal Article
    腹主动脉瘤(AAA)是一种严重的血管疾病,与血管重塑有关。CD38是哺乳动物中主要的NAD+消耗酶,我们之前的研究结果表明,CD38在许多心血管疾病中起着重要作用。然而,CD38在AAA中的作用尚未得到探讨。这里,我们报道,CD38的平滑肌细胞特异性缺失(CD38SKO)显着降低了CD38SKOAp-/-小鼠中AngII诱导的AAA的发病率,伴随着主动脉直径的增加,内侧厚度,胶原蛋白沉积,和主动脉的弹性蛋白降解。此外,CD38SKO显著抑制了AngII诱导的α-SMA下降,SM22α,和MYH11表达;VSMC中波形蛋白表达增加;平滑肌细胞和巨噬细胞浸润中VCAM-1表达增加。此外,我们证明CD38SKO在减轻AAA中的作用与沉默调节蛋白信号通路的激活有关.因此,我们得出结论,CD38通过促进血管重塑在AngII诱导的AAA中起关键作用,提示CD38可作为预防AAA的潜在治疗靶点.
    Abdominal aortic aneurysm (AAA) is a serious vascular disease which is associated with vascular remodeling. CD38 is a main NAD+-consuming enzyme in mammals, and our previous results showed that CD38 plays the important roles in many cardiovascular diseases. However, the role of CD38 in AAA has not been explored. Here, we report that smooth-muscle-cell-specific deletion of CD38 (CD38SKO) significantly reduced the morbidity of AngII-induced AAA in CD38SKOApoe-/- mice, which was accompanied with a increases in the aortic diameter, medial thickness, collagen deposition, and elastin degradation of aortas. In addition, CD38SKO significantly suppressed the AngII-induced decreases in α-SMA, SM22α, and MYH11 expression; the increase in Vimentin expression in VSMCs; and the increase in VCAM-1 expression in smooth muscle cells and macrophage infiltration. Furthermore, we demonstrated that the role of CD38SKO in attenuating AAA was associated with the activation of sirtuin signaling pathways. Therefore, we concluded that CD38 plays a pivotal role in AngII-induced AAA through promoting vascular remodeling, suggesting that CD38 may serve as a potential therapeutic target for the prevention of AAA.
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  • 文章类型: Journal Article
    对可再生能源日益增长的兴趣继续激发微生物生物氢生产的新工作,特别是利用大肠杆菌,兼性厌氧菌。在这里我们描述,首次提高了H2的生产率和产能,来自长期进化实验第5000代的大肠杆菌分离株。在这些反应条件下,对于祖先菌株,建立了100mL溶生肉汤(LB培养基)每小时接近或高于5mL的峰值生产率,并实现了每1mLLB培养基产生的0.15至0.22mLH2的批次效率。研究的所有11个分离株,自1988年以来一直在基本培养基中进行需氧培养,其H2生产率或容量降低,许多菌株根本无法在厌氧条件下生长。已经对这些菌株的基因组进行了测序,并且对基因型和表型之间的相关性的初步分析表明,在产生H2的两个分离物中只能观察到基因ydjO的突变,这可能表明该基因在维持野生型中的作用。不同突变背景下的代谢途径。这些结果为寻找具有增加H2生产能力的细菌菌株以及物种形成和表型转换控制的案例研究提供了线索。
    Growing interest in renewable energy continues to motivate new work on microbial biohydrogen production and in particular utilizing Escherichia coli a well-studied, facultative anaerobe. Here we characterize, for the first time the H2 production rate and capacity, of E coli isolates from the 50 000th generation of the Long-Term Evolution Experiment. Under these reaction conditions, peak production rates near or above 5 mL per hour for 100 mL of lysogeny broth (LB media) was established for the ancestral strains and batch efficiencies between 0.15 and 0.22 mL H2 produced per 1 mL LB media were achieved. All 11 isolates studied, which had been aerobically cultured in minimal media since 1988, exhibited a decreased H2 production rate or capacity with many strains unable to grow under anaerobic conditions at all. The genomes of these strains have been sequenced and a preliminary analysis of the correlations between genotype and phenotype shows that mutations in gene ydjO are exclusively observed in the two isolates which produce H2, potentially suggesting a role for this gene in the maintenance of wild type metabolic pathways in the context of diverse mutational backgrounds. These results provide hints towards uncovering new genetic targets for the pursuit of bacterial strains with increased capacity for H2 production as well as a case study in speciation and the control of phenotypic switching.
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