partner and localizer of BRCA2

  • 文章类型: Journal Article
    背景:DNA修复机制对于肿瘤发生至关重要,HR机制的破坏是人类乳腺癌(BC)的重要诱发因素。PALB2是HR的重要组成部分。犬乳腺肿瘤(CMT)和BCs之间有相似之处。作为它的人类对应物,PALB2突变可能是CMT的易感因素。
    目的:在本研究中,我们旨在研究PALB2变异体对肿瘤发生和犬乳腺肿瘤(CMT)恶性程度的影响.
    方法:我们进行Sanger测序以检测CMT患者犬PALB2基因WD40结构域的种系突变。我们进行了硅分析以研究变体,并比较了导致乳腺癌(BC)的人类种系PALB2突变与CMT犬中检测到的变异。
    结果:我们确定了一个内含子(c.30968C>G)变体,两个外显子(p。A1050V和p.R1354R)变体,和3'UTR变体(c.4071T>C)。其中,在本研究中首次鉴定出p.R1354R和c.4071T>C新变体。我们发现p.A1050V突变具有显著的效应。然而,由于两个物种之间核苷酸/氨基酸序列的差异,我们无法确定足够的相似性。尽管如此,人类序列在确切位置的可能变异,因为它们的狗对应物与几种癌症类型有关,这意味着这些变异可能对狗的肿瘤发生至关重要。我们的结果没有显示这些变体对肿瘤恶性肿瘤的任何影响。
    结论:本项目是首次研究PALB2基因WD40结构域与CMT之间的关系。我们的发现将有助于更好地了解PALB2基因在CMT中的致病机制。在人类中,犬科动物的变异位置与癌症相关的表型,如家族性BC,子宫内膜肿瘤,和遗传性癌症易感性综合征.生物信息学分析的结果应通过功能测试或病例对照研究进行调查。
    DNA repair mechanisms are essential for tumorigenesis and disruption of HR mechanism is an important predisposing factor of human breast cancers (BC). PALB2 is an important part of the HR. There are similarities between canine mammary tumours (CMT) and BCs. As its human counterpart, PALB2 mutations could be a predisposing factor of CMT.
    In this study, we aimed to investigate the impacts of PALB2 variants on tumorigenesis and canine mammary tumor (CMT) malignancy.
    We performed Sanger sequencing to detect germline mutations in the WD40 domain of the canine PALB2 gene in CMT patients. We conducted in silico analysis to investigate the variants, and compared the germline PALB2 mutations in humans that cause breast cancer (BC) with the variants detected in dogs with CMT.
    We identified an intronic (c.3096+8C>G) variant, two exonic (p.A1050V and p.R1354R) variants, and a 3\' UTR variant (c.4071T>C). Of these, p.R1354R and c.4071T>C novel variants were identified for the first time in this study. We found that the p.A1050V mutation had a significant effect. However, we could not determine sufficient similarity due to the differences in nucleotide/amino acid sequences between two species. Nonetheless, possible variants of human sequences in the exact location as their dog counterparts are associated with several cancer types, implying that the variants could be crucial for tumorigenesis in dogs. Our results did not show any effect of the variants on tumor malignancy.
    The current project is the first study investigating the relationship between the PALB2 gene WD40 domain and CMTs. Our findings will contribute to a better understanding of the pathogenic mechanism of the PALB2 gene in CMTs. In humans, variant positions in canines have been linked to cancer-related phenotypes such as familial BC, endometrial tumor, and hereditary cancer predisposition syndrome. The results of bioinformatics analyses should be investigated through functional tests or case-control studies.
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  • 文章类型: Journal Article
    背景:级联筛选,定义为帮助有风险的亲属获得针对显性遗传性癌症综合征的家族变异的有针对性的基因检测,是被证明是预防癌症的组成部分;然而,它的吸收很低。我们开发并进行了ConnectMyVariant干预的初步研究,参与者获得支持,以联系超出一级亲属的高危亲属,并鼓励亲属进行基因检测,并通过电子邮件和社交媒体与具有相同变异的其他人联系。参与者获得的支持包括倾听参与者的需求,协助文献家谱寻找共同的祖先,促进直接面向消费者的DNA测试和解释,并协助数据库搜索。
    目的:我们旨在评估干预的可行性,参与的动机,以及ConnectMyVariant参与者及其家人之间的参与。
    方法:我们使用了混合方法设计,包括定量和定性评估方法。首先,我们通过使用多种招募机制来表征招募和保留,从而考虑了干预的可行性,包括基于网络的广告,传播测试结果为阳性的邀请,提供者招聘,雪球采样,以及通过基于网络的社交网络和研究进行招聘。第二,我们表征了参与者的动机,关注,并通过项目文件记录参与者参与外展活动和参与者沟通的定性分析。我们使用归纳定性数据分析方法来分析电子邮件,自由文本注释,以及作为ConnectMyVariant干预的一部分与参与者生成的其他通信。
    结果:我们确定了84名使用不同招募机制的前瞻性参与者;57名参与者最终以不同的时间长度参加研究。关于参与干预的动机,参与者对与家谱相关的活动以及与具有其特定变体的其他人的交流最感兴趣.尽管人们希望找到具有相同变体并预防癌症的其他人,更多的参与者表示有兴趣了解他们的家谱和家庭健康史,亲属的预防被认为是外展的自然副作用。对参与的担忧包括亲属是否愿意交流,如何去做,以及具有特定变体的其他人是否会被激励来帮助寻找共同的祖先。我们观察到ConnectMyVariant参与者参与了6项主要活动来识别风险亲属并与之沟通:分享家族史,家庭成员测试,直接面向消费者的家谱基因检测分析,联系(远亲),文献家谱,并扩大变体组或外展。与具有相同变体的其他人有联系的参与者更有可能参与一些大家庭外展活动。
    结论:这项研究表明,人们对扩大家庭外展作为一种机制来改善级联筛查以预防遗传性癌症有兴趣。系统评估这种外展结果的其他研究可能具有挑战性,但有必要。
    BACKGROUND: Cascade screening, defined as helping at-risk relatives get targeted genetic testing of familial variants for dominant hereditary cancer syndromes, is a proven component of cancer prevention; however, its uptake is low. We developed and conducted a pilot study of the ConnectMyVariant intervention, in which participants received support to contact at-risk relatives that extended beyond first-degree relatives and encourage relatives to obtain genetic testing and connect with others having the same variant through email and social media. The support that participants received included listening to participants\' needs, assisting with documentary genealogy to find common ancestors, facilitating direct-to-consumer DNA testing and interpretation, and assisting with database searches.
    OBJECTIVE: We aimed to assess intervention feasibility, motivations for participating, and engagement among ConnectMyVariant participants and their families.
    METHODS: We used a mixed methods design including both quantitative and qualitative evaluation methods. First, we considered intervention feasibility by characterizing recruitment and retention using multiple recruitment mechanisms, including web-based advertising, dissemination of invitations with positive test results, provider recruitment, snowball sampling, and recruitment through web-based social networks and research studies. Second, we characterized participants\' motivations, concerns, and engagement through project documentation of participant engagement in outreach activities and qualitative analysis of participant communications. We used an inductive qualitative data analysis approach to analyze emails, free-text notes, and other communications generated with participants as part of the ConnectMyVariant intervention.
    RESULTS: We identified 84 prospective participants using different recruitment mechanisms; 57 participants were ultimately enrolled in the study for varying lengths of time. With respect to motivations for engaging in the intervention, participants were most interested in activities relating to genealogy and communication with others who had their specific variants. Although there was a desire to find others with the same variant and prevent cancer, more participants expressed an interest in learning about their genealogy and family health history, with prevention in relatives considered a natural side effect of outreach. Concerns about participation included whether relatives would be open to communication, how to go about it, and whether others with a specific variant would be motivated to help find common ancestors. We observed that ConnectMyVariant participants engaged in 6 primary activities to identify and communicate with at-risk relatives: sharing family history, family member testing, direct-to-consumer genealogy genetic testing analysis, contacting (distant) relatives, documentary genealogy, and expanding variant groups or outreach. Participants who connected with others who had the same variant were more likely to engage with several extended family outreach activities.
    CONCLUSIONS: This study demonstrated that there is an interest in extended family outreach as a mechanism to improve cascade screening for hereditary cancer prevention. Additional research to systematically evaluate the outcomes of such outreach may be challenging but is warranted.
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  • 文章类型: Case Reports
    背景:聚(ADP-核糖)聚合酶(PARP)抑制剂奥拉帕尼在同源重组修复(HRR)基因突变的转移性去势抵抗性前列腺癌(mCRPC)患者中显示出优异的临床效果。然而,当患者的肿瘤组织体积不足以进行HRR基因突变的基因组分析时,循环肿瘤DNA(ctDNA)可能有助于确定和监测奥拉帕尼的疗效,以及在阿比特龙联合治疗中,并了解与此类突变相关的任何抗性机制。
    方法:一名61岁的男性被诊断为转移性前列腺腺癌,最初是激素敏感性,显示高Gleason评分(5+5=10)和绝对阳性率(14/14活检标本)。在几种标准疗法失败后,患者进展为mCRPC。令人惊讶的是,患者对奥拉帕利-阿比特龙-泼尼松联合治疗(雄激素剥夺疗法,在中国作为“最终选择”提供)。血清总前列腺特异性抗原(TPSA)水平降低,症状缓解4个月。然而,此后,血清TPSA水平开始缓慢升高,表明奥拉帕尼抗性的发展。随后对ctDNA进行全面的基因组分析,通过下一代测序筛选508个癌症相关基因,鉴定了10个体细胞变体以及3个拷贝数改变。BRCA2(PALB2)的伴侣和定位器中的两个鉴定出的反向错义突变可能已经恢复了阅读框,恢复主要种系PALB2突变的功能并引起对PARP抑制剂olaparib的抗性。
    结论:通过ctDNA的基因组分析发现的PALB2中的反向突变,可能代表了mCRPC对奥拉帕尼的潜在耐药机制。
    BACKGROUND: The poly (ADP-ribose) polymerase (PARP) inhibitor olaparib has displayed superior clinical effect in metastatic castration-resistant prostate cancer (mCRPC) patients with the homologous recombination repair (HRR) genes mutations. However, when a patient\'s tumor tissue volume is insufficient for genomic profiling of HRR gene mutations, circulating tumor DNA (ctDNA) may be useful in helping to determine and monitor the efficacy of olaparib, as well as in abiraterone-combination treatment, and for understanding any resistance mechanism related to such mutations.
    METHODS: A 61-year-old man who was diagnosed with metastatic prostate adenocarcinoma was initially hormone sensitivity, showing high Gleason score (5 + 5 = 10) and absolute positive rate (14/14 biopsied specimens). Following failure of several standard therapies, the patient progressed to mCRPC. Surprisingly, the patient showed good response to olaparib-abiraterone-prednisone combination treatment (an androgen-deprivation therapy, provided as the \'final choice\' in China). Serum total prostate-specific antigen (TPSA) level reduced and symptoms remitted for 4 months. However, thereafter, serum TPSA levels began slowly increasing, indicating development of olaparib resistance. Subsequent comprehensive genomic profiling of ctDNA, screening 508 cancer-related genes by next-generation sequencing, identified 10 somatic variants as well as 3 copy number alterations. Two identified reverse missense mutations in partner and localizer of BRCA2 (PALB2) may have recovered the reading frame, restoring function of the primary germline PALB2 mutation and causing resistance to the PARP inhibitor olaparib.
    CONCLUSIONS: Reverse mutations in PALB2, discovered via genomic profiling of ctDNA, may represent a potential resistance mechanism against olaparib in mCRPC.
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  • 文章类型: Journal Article
    During DNA repair, BRCA1 and BRCA2 interact with the tumor suppressor partner and localizer of BRCA2 (PALB2). PALB2 mutations are associated with an increased risk of breast and ovarian carcinoma, and upregulated PALB2 expression is associated with poor clinical outcomes. The present study investigated the role and prognostic value of PALB2 in pancreatic ductal adenocarcinoma (PDAC). PALB2 expression was inhibited using a small interfering RNA in PDAC cell lines, and the subsequent effects on cell proliferation and migration were investigated. Tissue microarrays from 157 patients undergoing a pancreaticoduodenectomy for PDAC were analyzed via immunohistochemistry, and PALB2 expression was compared with patient outcomes using Kaplan-Meier curves and the multivariate Cox regression model. PALB2-knockdown in PDAC cells had little effect on cell proliferation, but significantly decreased cell migration. Relatively high PALB2 expression was observed in PDAC tissues compared with in peritumoral tissues. Overall survival (OS) was negatively associated with PALB2 expression. TNM stage and PALB2 expression were identified as independent prognostic factors associated with OS via multivariate analysis. Overall, the present study demonstrated that PDAC cell migration was dependent on PALB2, which was further supported by the finding that elevated PALB2 expression in PDAC tissues was associated with poor survival in patients with PDAC. Therefore, PALB2 may serve as a novel prognostic marker in PDAC, which may aid with the development of therapeutic strategies for the disease.
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  • 文章类型: Journal Article
    PALB2 mutation is associated with increased breast cancer risk; however, PALB2 mutation is rare in sporadic breast cancer cases and little is known about PALB2 expression in breast cancer. Here, we evaluated the prognostic effects of PALB2 with tissue microarray specimens of 117 female breast cancer patients, and determined the potential underlying mechanisms in cell models. In immunohistochemical analysis, we found increased expression of PALB2 in breast cancer tissues compared with the adjacent normal ductal epithelium (P < 0.001). Higher PALB2 scores were positively associated with histological grade and higher PALB2 expression was found in patients that were Her-2 negative compared with those that were positive (P < 0.05). Interestingly, higher expression of PALB2 was significantly associated with poorer overall survival (P < 0.01) in patients with stage III or nearby lymph node metastasis (N1, N2 or N3). In vitro studies found that PALB2 may promote the migration and invasion of MDA-MB-231 cells through E-cadherin suppression and NF-κB activation. In conclusion, these results suggest that PALB2 expression levels may serve as a novel prognostic factor for breast cancer patients.
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