non-sense mutation

  • 文章类型: Case Reports
    经典途径(CP)的早期补体成分的缺陷与系统性红斑狼疮(SLE)或SLE样综合征和严重的化脓性感染有关。其中,到目前为止,已经报告了9例完全的C1缺乏症。这里,我们描述了一名34岁的男性患者,从童年开始反复感染,包括肺炎球菌和脑膜炎球菌,丹毒,皮下脓肿,和上呼吸道的反复感染。患者还表现为成人发作性SLE,符合ACR标准的7/11和2019年EULAR/ACR分类标准的34,以及IV-G(A)类增生性狼疮性肾炎(LN)。补体级联的筛选显示出不可估量的低CH50,而替代途径(AP)功能正常。随后的补体成分测定显示无法检测到C1r和C1q水平低的C1s,C3正常,C4和C2浓度略有升高。患者没有抗C1q抗体。肾活检显示IV-G(A)LN类,补体C1q阳性沿肾小球基底膜(GBM)和IgG弱沉积,IgM,补片和GBM中的C3和C4。在基于ELISA的功能测定C4d沉积中,患者的补体活性缺失通过添加C1完全恢复。通过全基因组测序分析患者的基因组,显示C1S基因中的两个截短变体。一个突变位于外显子5的核苷酸514,由G到T的核苷酸取代引起,导致Gly172的无义突变(p。Gly172*)。另一个突变位于外显子7的核苷酸750,其中C被G取代,导致Tyr250的无义突变(p.Tyr250*).两种突变都产生过早的终止密码子,并且以前在文献中没有报道过。这些基因发现,再加上循环中没有C1,强烈提示我们的患者存在复合杂合子C1s缺乏症,在补体级联中没有额外的缺陷。与之前的C1缺陷案例一样,患者对利妥昔单抗反应良好.本病例强调了关于CP在SLE病因发病机制中的作用的悬而未决的问题。
    Deficiencies of the early complement components of the classical pathway (CP) are well-documented in association with systemic lupus erythematosus (SLE) or SLE-like syndromes and severe pyogenic infections. Among these, complete C1s deficiency has been reported in nine cases so far. Here, we describe a 34-year-old male patient who presented with severe, recurrent infections since childhood, including meningitides with pneumococci and meningococci, erysipelas, subcutaneous abscess, and recurrent infections of the upper airways. The patient also exhibited adult-onset SLE, meeting 7/11 of the ACR criteria and 34 of the 2019 EULAR/ACR classification criteria, along with class IV-G (A) proliferative lupus nephritis (LN). A screening of the complement cascade showed immeasurably low CH50, while the alternative pathway (AP) function was normal. Subsequent determination of complement components revealed undetectable C1s with low levels of C1r and C1q, normal C3, and slightly elevated C4 and C2 concentrations. The patient had no anti-C1q antibodies. Renal biopsy showed class IV-G (A) LN with complement C1q positivity along the glomerular basement membranes (GBMs) and weak deposition of IgG, IgM, and complement C3 and C4 in the mesangium and GBM. In an ELISA-based functional assay determining C4d deposition, the patient\'s absent complement activity was fully restored by adding C1s. The genome of the patient was analyzed by whole genome sequencing showing two truncating variants in the C1S gene. One mutation was located at nucleotide 514 in exon 5, caused by a nucleotide substitution from G to T, resulting in a nonsense mutation from Gly172 (p.Gly172*). The other mutation was located at nucleotide 750 in exon 7, where C was replaced by a G, resulting in a nonsense mutation from Tyr250 (p.Tyr250*). Both mutations create a premature stop codon and have not previously been reported in the literature. These genetic findings, combined with the absence of C1s in the circulation, strongly suggest a compound heterozygote C1s deficiency in our patient, without additional defect within the complement cascade. As in a previous C1s deficiency case, the patient responded well to rituximab. The present case highlights unanswered questions regarding the CP\'s role in SLE etiopathogenesis.
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  • 文章类型: Journal Article
    Congenital short bowel syndrome (CSBS) is a rare condition characterized by an inborn shortening of bowel length with loss of intestinal functions, which often combines malrotation. CXADR-like membrane protein (CLMP) and filamin A (FLNA) gene mutations are the two major causes of this inherited defect. We presented two siblings with the older brother suffering from a laparotomy for bowel obstruction due to malrotation on the 17th day after birth. The younger sister encountered a laparotomy for lactobezoar at 6 months old. CSBS was diagnosed by measurement of the bowel length during the operations. Compound heterozygous CLMP mutations with the paternal allele harboring a long deletion across exon 3-5 and the maternal allele bearing a non-sense mutation of exon 3 (c.235C > T, p.Q79∗) were identified in both cases. They are the first reported familial CSBS caused by novel CLMP mutations in Taiwan.
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  • 文章类型: Case Reports
    裂手/裂脚畸形(SHFM)或外翻畸形的特征是手或脚的深正中裂,掌骨发育不全或发育不全,meta骨,和指骨。它是一组临床和遗传异质性的肢体畸形。这项研究旨在鉴定具有常染色体隐性遗传SHFM的近亲巴基斯坦家庭中的致病变异。获得外周血样本,提取DNA,PCR扩增WNT10B编码区和非编码区,并使用ThermoFisherScientific建议的工作流程进行Sanger测序。在索引患者的WNT10B基因中鉴定出一种新的纯合无义变体(c.1098C>A;p.Cys366*),与文献中的类似数据相比,这可能解释了该家族中的SHFM类型6。
    Split hand/split foot malformation (SHFM) or ectrodactyly is characterized by a deep median cleft of the hand or foot, hypoplasia or aplasia of the metacarpals, metatarsals, and phalanges. It is a clinically and genetically heterogeneous group of limb malformations. This study aimed to identify the pathogenic variant in a consanguineous Pakistani family with autosomal recessive SHFM. Peripheral blood samples were obtained, DNA was extracted, WNT10B coding and noncoding regions were PCR amplified and Sanger sequencing was performed using workflow suggested by Thermo Fisher Scientific. A novel homozygous nonsense variant (c.1098C>A; p.Cys366*) was identified in the WNT10B gene in the index patients, which probably explains SHFM type 6 in this family in comparison with similar data from the literature.
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  • 文章类型: Case Reports
    背景:严重的5,10-亚甲基四氢叶酸还原酶(MTHFR)缺乏症是一种常染色体隐性遗传的异质性代谢紊乱。MTHFR基因的致病突变与严重的MTHFR缺乏有关。MTHFR缺乏的临床表现是高度可变的,并与几种神经系统异常相关。方法:对来自家庭的所有五个可用个体进行直接全外显子组测序(WES),包括使用标准程序的受影响个人(III-7)。结果:我们观察到先证者(III-7)脑白质异常,呼吸暂停,和小头畸形。WES分析鉴定了MTHFR基因中的新纯合无义突变(c.154C>T;p.Arg52*),其与家族内的疾病表型分离。结论:我们在一个患有严重MTHFR缺陷的埃及家庭中发现了MTHFR基因的新的无义突变。目前的研究在临床上很重要,因为它增加了越来越多的MTHFR突变,这可能有助于对受影响儿童家庭的遗传咨询和适当的基因型-表型相关性。
    Background: Severe 5,10-methylenetetrahydrofolate reductase (MTHFR) deficiency is a heterogeneous metabolic disorder inherited in an autosomal recessive manner. Pathogenic mutations in MTHFR gene have been associated with severe MTHFR deficiency. The clinical presentation of MTHFR deficiency is highly variable and associated with several neurological anomalies. Methods: Direct whole-exome sequencing (WES) was performed in all the five available individuals from the family, including the affected individual (III-7) using standard procedures. Results: We observed a proband (III-7) with an abnormality in the cerebral white matter, apnoea, and microcephaly. WES analysis identified a novel homozygous non-sense mutation (c.154C>T; p.Arg52*) in MTHFR gene that segregated with the disease phenotype within the family. Conclusion: We identified a novel non-sense mutation in MTHFR gene in a single Egyptian family with severe MTHFR deficiency. The present investigation is clinically important, as it adds to the growing list of MTHFR mutations, which might help in genetic counseling of families of affected children and proper genotype-phenotype correlation.
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  • 文章类型: Journal Article
    The constitutively expressed hyaluronic acid capsule is an important virulence factor of Streptococcus equi, the cause of equine strangles. Study of the genomic sequence of CF22caps-, a non-encapsulated mutant of S. equi CF22 generated by gamma (Co60) irradiation revealed a non-sense mutation in fasC (SEQ_0302), a sensor kinase gene in FasBCAX an operon with an important regulatory role in expression of streptococcal secreted virulence and matrix binding proteins. The mutation was associated with a significant (p < .05) decrease in transcription of hasA, the synthase gene essential for hyaluronic acid synthesis and, conversely, with small increases in transcription of skc, covR and seM. The early growth phase of CF22caps- was also delayed compared to the CF22caps+ parent. In contrast to the human pathogen, S. pyogenes, capsule synthesis in S. equi therefore appears to be controlled by FasBCAX and not by CovRS.
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  • 文章类型: Journal Article
    Introduction: Congenital heart diseases (CHDs) are structural cardiovascular malformations that arise from abnormal development of the heart during the prenatal life. Mutations in the TBX5 gene, encoding T-box transcription factor, are a major cause of CHD. To evaluate the TBX5 mutations in hotspot exons in sporadic pediatric patients with CHD phenotypes, analytical case/control study performed in an Iranian cohort of unrelated patients with clinical diagnosis of congenital heart malformations. Methods: We investigated TBX5 coding exons 4, 5, 6 and 7 in 95 sporadic patients with CHD phenotypes and compared to 82 healthy controls using PCR-SSCP and DNA sequencing approaches. Results: We report here on a novel and heterozygote Non-sense mutation in exon 5 of TBX5, E128X (G14742T), in two Iranian children. This mutation locates inside the T-box and both of pediatric patients carrying this novel mutation suffer from severe heart malformations. The G14742T mutation leads to the substitution of glutamic acid (E) by stop codon (X) at residue 128, an evolutionarily conserved position in T-box as well as in other species. The non-sense mutation of E128X was predicted to be pathogenic by Mutation Taster and Polyphen software programs. Conclusion: TBX5 E128X mutation results in a translational premature stop. This type of mutation results in a shortened protein that may function improperly and which cannot bind to other transcription factors; therefore, haploinsufficiency of TBX5 protein is presumably causing the severe cardiac malformations in these patients.
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