multiplex staining

  • 文章类型: Journal Article
    转移是食管鳞状细胞癌(ESCC)治疗的最大障碍。应用单细胞RNA测序分析来研究在多个时间点从肺转移小鼠模型分离的肺转移性ESCC细胞,以表征早期转移性微环境。鉴定出类似于转移起始细胞(MIC)的小群亲本KYSE30细胞系(簇S),因为它们在肺转移部位存活并定殖。S簇和其他亚群之间的差异表达谱比较确定了一组7个转移起始特征基因(MIS),包括CD44和TACSTD2,代表ESCC中的中等收入国家。功能研究表明,MIC(CD44high)表现出显著增强的细胞存活率(抗氧化应激和凋亡),迁移,入侵,stemness,和体内肺转移能力,虽然生物信息学分析显示器官发育增强,应激反应,和神经元发育,可能重塑早期转移微环境。同时,早期转移细胞表现出准上皮-间质表型,以支持侵袭和锚定。4种MIS的多重免疫组织化学(mIHC)染色(CD44,S100A14,RHOD,和TACSTD2)在ESCC临床样本中证明了差异MIS表达评分(dMIS)可预测淋巴结转移,总生存率,和癌症血栓形成的风险。
    Metastasis is the biggest obstacle to esophageal squamous cell carcinoma (ESCC) treatment. Single-cell RNA sequencing analyses are applied to investigate lung metastatic ESCC cells isolated from pulmonary metastasis mouse model at multiple timepoints to characterize early metastatic microenvironment. A small population of parental KYSE30 cell line (Cluster S) resembling metastasis-initiating cells (MICs) is identified because they survive and colonize at lung metastatic sites. Differential expression profile comparisons between Cluster S and other subpopulations identified a panel of 7 metastasis-initiating signature genes (MIS), including CD44 and TACSTD2, to represent MICs in ESCC. Functional studies demonstrated MICs (CD44high) exhibited significantly enhanced cell survival (resistances to oxidative stress and apoptosis), migration, invasion, stemness, and in vivo lung metastasis capabilities, while bioinformatics analyses revealed enhanced organ development, stress responses, and neuron development, potentially remodel early metastasis microenvironment. Meanwhile, early metastasizing cells demonstrate quasi-epithelial-mesenchymal phenotype to support both invasion and anchorage. Multiplex immunohistochemistry (mIHC) staining of 4 MISs (CD44, S100A14, RHOD, and TACSTD2) in ESCC clinical samples demonstrated differential MIS expression scores (dMISs) predict lymph node metastasis, overall survival, and risk of carcinothrombosis.
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  • 文章类型: Journal Article
    结核病(TB)仍然是艾滋病毒感染者死亡的主要原因,以进行性肺部炎症为特征。尽管结核病的标志是局灶性肉芽肿性肺病变,我们对HIV和TB合并感染的组织病理学特征和炎症调节的理解仍然不完整.在这项研究中,我们旨在通过对HIV和TB合并感染和TB患者的免疫组织化学分析来阐明这些组织病理学特征,揭示了明显的差异。值得注意的是,HIV和TB肉芽肿表现出CD68+巨噬细胞(Mφ)的聚集,而结核病病变主要表现为CD20+B细胞聚集,突出共同感染中不同的免疫反应。空间转录组分析进一步阐明了CD68+Mφ在HIV和TB中的聚集,伴随着IL6途径的激活,可能加剧炎症。通过多重免疫染色,我们在HIV和TB中验证了两种肉芽肿类型,在TB中验证了三种,以细胞架构为特征。值得注意的是,在两种类型的HIV和TB肉芽肿中,CD68+Mφ高表达IL6R/pSTAT3,对比TB肉芽肿高表达IFNGRA/SOCS3,表明不同的信号通路在起作用。因此,IL6途径的激活可能会加剧HIV和TB肺部的炎症,而富含SOCS3的免疫微环境抑制IL6诱导的结核病过度炎症。这些发现为HIV和TB肉芽肿的形成提供了重要的见解,照亮潜在的治疗靶点,特别是对于HIV和TB共同感染下的肉芽肿性肺部。我们的研究强调了全面了解HIV和TB共感染的免疫发病机制的重要性,并提出了用SOCS3激活剂或抗IL6R剂靶向IL6信号以减轻HIV和TB共感染个体肺部炎症的潜在途径。
    Tuberculosis (TB) remains a leading cause of mortality among individuals coinfected with HIV, characterized by progressive pulmonary inflammation. Despite TB\'s hallmark being focal granulomatous lung lesions, our understanding of the histopathological features and regulation of inflammation in HIV & TB coinfection remains incomplete. In this study, we aimed to elucidate these histopathological features through an immunohistochemistry analysis of HIV & TB co-infected and TB patients, revealing marked differences. Notably, HIV & TB granulomas exhibited aggregation of CD68 + macrophage (Mφ), while TB lesions predominantly featured aggregation of CD20+ B cells, highlighting distinct immune responses in coinfection. Spatial transcriptome profiling further elucidated CD68+ Mφ aggregation in HIV & TB, accompanied by activation of IL6 pathway, potentially exacerbating inflammation. Through multiplex immunostaining, we validated two granuloma types in HIV & TB versus three in TB, distinguished by cell architecture. Remarkably, in the two types of HIV & TB granulomas, CD68 + Mφ highly co-expressed IL6R/pSTAT3, contrasting TB granulomas\' high IFNGRA/SOCS3 expression, indicating different signaling pathways at play. Thus, activation of IL6 pathway may intensify inflammation in HIV & TB-lungs, while SOCS3-enriched immune microenvironment suppresses IL6-induced over-inflammation in TB. These findings provide crucial insights into HIV & TB granuloma formation, shedding light on potential therapeutic targets, particularly for granulomatous pulmonary under HIV & TB co-infection. Our study emphasizes the importance of a comprehensive understanding of the immunopathogenesis of HIV & TB coinfection and suggests potential avenues for targeting IL6 signaling with SOCS3 activators or anti-IL6R agents to mitigate lung inflammation in HIV & TB coinfected individuals.
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  • 文章类型: Letter
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  • 文章类型: Journal Article
    大脑调节其各个区域的特定功能。了解整个大脑中不同细胞的组织对于研究大脑功能至关重要。以前的研究集中在几个区域,并且难以分析连续的组织样本。在这项研究中,我们引入了一条管道,可以从连续切片中快速有效地获取解剖和组织学信息。首先,我们开发了一种连续的脑切片染色方法来染色连续切片,并获得了98.5%以上的高度完整的切片。随后,使用自主开发的分析软件,我们将成像切片的信号注册并量化到艾伦小鼠大脑共同坐标框架,它与多模态图像和倾斜截面平面兼容。最后,我们通过分析衰老和年轻小鼠急性应激期间全脑的活动变化,用免疫染色验证了管道。通过消除重复手动操作导致的问题,该管道广泛适用于快速便捷的来自多个样本的系列脑切片,这有利于促进生命科学研究。
    The brain modulates specific functions in its various regions. Understanding the organization of different cells in the whole brain is crucial for investigating brain functions. Previous studies have focused on several regions and have had difficulty analyzing serial tissue samples. In this study, we introduced a pipeline to acquire anatomical and histological information quickly and efficiently from serial sections. First, we developed a serial brain-slice-staining method to stain serial sections and obtained more than 98.5% of slices with high integrity. Subsequently, using the self-developed analysis software, we registered and quantified the signals of imaged sections to the Allen Mouse Brain Common Coordinate Framework, which is compatible with multimodal images and slant section planes. Finally, we validated the pipeline with immunostaining by analyzing the activity variance in the whole brain during acute stress in aging and young mice. By removing the problems resulting from repeated manual operations, this pipeline is widely applicable to serial brain slices from multiple samples in a rapid and convenient manner, which benefits to facilitate research in life sciences.
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  • 文章类型: Journal Article
    单元中细胞(CIC)结构被定义为一个或多个单元被封闭在另一个内部的特殊结构。越来越多的数据表明,CIC结构是异质性癌症中复杂细胞行为和预后预测因子的功能替代。然而,在人食管鳞状细胞癌(ESCC)中,CIC结构分析及其预后价值尚未见报道。我们使用“上皮-巨噬细胞-白细胞”(EML)多重染色对ESCC中基于亚型CIC的谱分析,并通过Kaplan-Meier作图和Cox回归模型检查了CIC结构谱分析的预后价值。完全正确,在ESCC组织中鉴定出五种CIC结构亚型,其中大多数是同型CIC(hoCIC),肿瘤细胞内的肿瘤细胞(TiT)。通过单变量和多变量分析,TiT被证明是可切除ESCC的独立预后因素,TiT密度较高的患者术后生存时间较长。此外,在按TNM阶段分层的亚群分析中,与低TiT密度患者相比,高TiT密度与TNMIII和IV期患者的总生存期(OS)更长(平均OS:51vs15个月,P=0.04)和T3阶段(平均OS:57vs17个月,P=0.024)。一起,我们报道了ESCC中的首次CIC结构分析,并探讨了亚型CIC结构的预后价值,这支持了这样的观点,即具有CIC结构分析的功能病理学是人类癌症的新兴预后因素,比如ESCC。
    Cell-in-cell (CIC) structures are defined as the special structures with one or more cells enclosed inside another one. Increasing data indicated that CIC structures were functional surrogates of complicated cell behaviors and prognosis predictor in heterogeneous cancers. However, the CIC structure profiling and its prognostic value have not been reported in human esophageal squamous cell Carcinoma (ESCC). We conducted the analysis of subtyped CIC-based profiling in ESCC using \"epithelium-macrophage-leukocyte\" (EML) multiplex staining and examined the prognostic value of CIC structure profiling through Kaplan-Meier plotting and Cox regression model. Totally, five CIC structure subtypes were identified in ESCC tissue and the majority of them was homotypic CIC (hoCIC) with tumor cells inside tumor cells (TiT). By univariate and multivariate analyses, TiT was shown to be an independent prognostic factor for resectable ESCC, and patients with higher density of TiT tended to have longer post-operational survival time. Furthermore, in subpopulation analysis stratified by TNM stage, high TiT density was associated with longer overall survival (OS) in patients of TNM stages III and IV as compared with patients with low TiT density (mean OS: 51 vs 15 months, P = 0.04) and T3 stage (mean OS: 57 vs 17 months, P=0.024). Together, we reported the first CIC structure profiling in ESCC and explored the prognostic value of subtyped CIC structures, which supported the notion that functional pathology with CIC structure profiling is an emerging prognostic factor for human cancers, such as ESCC.
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