multiplex immunofluorescence

多重免疫荧光
  • 文章类型: Journal Article
    目的:子宫内膜免疫细胞对于维持体内平衡和子宫内膜对胚胎着床的容受性至关重要。了解子宫内膜免疫细胞群体的区域变化对于理解正常子宫内膜功能和子宫内膜疾病的病理生理学至关重要。尽管以前的研究集中在子宫内膜的整体免疫细胞组成和功能,绝经前妇女的区域差异尚不清楚.
    方法:从四个区域获得子宫内膜活检(前,后部,左侧,和右侧)接受宫腔镜检查的绝经前妇女,没有异常。使用15色人子宫内膜免疫细胞聚焦流式细胞术面板进行分析。采用高维流式细胞术结合聚类算法来揭示子宫内膜免疫细胞的复杂性。此外,进行多重免疫荧光以进一步验证。
    结果:我们的发现表明,在正常条件下,在增殖阶段,免疫细胞在不同区域的分布和丰度没有显着变化。每个区域都有相似的免疫细胞亚型,表明一致的免疫微环境。然而,当比较正常区域和有局灶性出血的区域时,观察到显著差异。CD8+T细胞的增加突出了局部异常对免疫微环境的影响。
    结论:我们的研究表明,在绝经前妇女的增殖期,子宫内膜免疫细胞景观在不同解剖区域是一致的。这一发现对于理解正常子宫内膜功能和子宫内膜疾病的病理生理学具有重要意义。
    OBJECTIVE: Endometrial immune cells are essential for maintaining homeostasis and the endometrial receptivity to embryo implantation. Understanding regional variations in endometrial immune cell populations is crucial for comprehending normal endometrial function and the pathophysiology of endometrial disorders. Despite previous studies focusing on the overall immune cell composition and function in the endometrium, regional variations in premenopausal women remain unclear.
    METHODS: Endometrial biopsies were obtained from four regions (anterior, posterior, left lateral, and right lateral) of premenopausal women undergoing hysteroscopy with no abnormalities. A 15-color human endometrial immune cell-focused flow cytometry panel was used for analysis. High-dimensional flow cytometry combined with a clustering algorithm was employed to unravel the complexity of endometrial immune cells. Additionally, multiplex immunofluorescent was performed for further validation.
    RESULTS: Our findings revealed no significant variation in the distribution and abundance of immune cells across different regions under normal conditions during the proliferative phase. Each region harbored similar immune cell subtypes, indicating a consistent immune microenvironment. However, when comparing normal regions to areas with focal hemorrhage, significant differences were observed. An increase in CD8+ T cells highlights the impact of localized abnormalities on the immune microenvironment.
    CONCLUSIONS: Our study demonstrates that the endometrial immune cell landscape is consistent across different anatomical regions during the proliferative phase in premenopausal women. This finding has important implications for understanding normal endometrial function and the pathophysiology of endometrial disorders.
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  • 文章类型: Journal Article
    (1)背景:SMARCA4缺陷的未分化子宫肉瘤(SDUS)是一种罕见且侵袭性的癌症,迫切需要新的治疗策略。尽管免疫疗法在各种癌症类型中的疗效得到证实,其在SDUS中的应用在很大程度上仍未被探索。本研究旨在探讨SDUS的免疫微环境,以评估利用免疫治疗的可行性。(2)方法:采用多重免疫荧光(mIF)检测2例SDUS与其他亚型子宫内膜间质肉瘤(ESS)的免疫微环境。本研究涉及免疫细胞浸润的综合评价,细胞相互作用,和肿瘤免疫微环境(TiME)内的空间组织。进行统计分析以评估免疫细胞密度的差异以及SDUS与其他ESS之间的相互作用。(3)结果:SDUS细胞毒性T淋巴细胞(CTL)密度明显增高,T辅助(Th)细胞,B细胞,和巨噬细胞与其他ESS相比。值得注意的细胞相互作用包括Th-CTL和Th-B细胞相互作用,在SDUS中更为突出。空间分析揭示了以淋巴细胞聚集和血管丰富的环境为特征的不同免疫壁。提示SDUS中活跃和参与的免疫微环境。(4)结论:结果表明SDUS表现出高度免疫原性的TiME,以大量淋巴细胞浸润和动态细胞相互作用为特征。这些发现强调了免疫疗法作为SDUS的有效治疗方法的潜力。然而,考虑到评估的样本数量少,得出这些结论应该谨慎。这项研究强调了对这种具有挑战性的癌症亚型进行免疫靶向疗法进一步研究的重要性。用更大的样本量来验证和扩展这些初步发现。
    (1) Background: SMARCA4-deficient undifferentiated uterine sarcoma (SDUS) is a rare and aggressive cancer that urgently requires novel therapeutic strategies. Despite the proven efficacy of immunotherapy in various cancer types, its application in SDUS remains largely unexplored. This study aims to investigate the immune microenvironment of SDUS to evaluate the feasibility of utilizing immunotherapy. (2) Methods: Multiplex immunofluorescence (mIF) was employed to examine the immune microenvironment in two cases of SDUS in comparison to other subtypes of endometrial stromal sarcomas (ESSs). This research involved a comprehensive evaluation of immune cell infiltration, cellular interactions, and spatial organization within the tumor immune microenvironment (TiME). Statistical analysis was performed to assess differences in immune cell densities and interactions between SDUS and other ESSs. (3) Results: SDUS exhibited a significantly higher density of cytotoxic T lymphocytes (CTLs), T helper (Th) cells, B cells, and macrophages compared to other ESSs. Notable cellular interactions included Th-CTL and Th-B cell interactions, which were more prominent in SDUS. The spatial analysis revealed distinct immune niches characterized by lymphocyte aggregation and a vascular-rich environment, suggesting an active and engaged immune microenvironment in SDUS. (4) Conclusions: The results suggest that SDUS exhibits a highly immunogenic TiME, characterized by substantial lymphocyte infiltration and dynamic cellular interactions. These findings highlight the potential of immunotherapy as an effective treatment approach for SDUS. However, given the small number of samples evaluated, these conclusions should be drawn with caution. This study underscores the importance of additional investigation into immune-targeted therapies for this challenging cancer subtype, with a larger sample size to validate and expand upon these preliminary findings.
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  • 文章类型: Journal Article
    背景:胶质瘤的治疗,中枢神经系统最常见的原发性恶性肿瘤,具有挑战性。花生四烯酸5-脂氧合酶激活蛋白(ALOX5AP)对于将花生四烯酸转化为白三烯至关重要,并且与多种癌症的不良预后有关。然而,其与胶质瘤预后和免疫微环境的关系仍未完全了解。
    方法:基于公共数据库评估ALOX5AP的差异表达。Kaplan-Meier,多变量Cox比例风险回归分析,与时间相关的接收机工作特性,和列线图用于评估ALOX5AP的预后价值。ALOX5AP和免疫浸润之间的关系使用ESTIMATE和CIBERSORT算法计算。ALOX5AP与人类白细胞抗原分子的关系,免疫检查点,肿瘤突变负荷,潮流得分,并计算免疫表型以评估神经胶质瘤免疫治疗反应。进行单基因GSEA和基于共表达网络的GO和KEGG富集分析以探索ALOX5AP的潜在功能。使用多重免疫荧光染色验证ALOX5AP表达,并使用神经胶质瘤组织微阵列证实其预后作用。
    结果:ALOX5AP在胶质瘤中高表达,表达水平与世界卫生组织(WHO)等级有关,年龄,性别,IDH突变状态,1p19q共删除状态,MGMTp甲基化状态,预后不良。单细胞RNA测序显示ALOX5AP在巨噬细胞中表达,单核细胞,和T细胞,但不在肿瘤细胞中。ALOX5AP表达与M2巨噬细胞浸润和不良免疫治疗反应呈正相关。免疫荧光染色显示ALOX5AP在WHO高级别胶质瘤中上调,定位于M2巨噬细胞。胶质瘤组织芯片证实了ALOX5AP在胶质瘤预后中的不良作用。
    结论:ALOX5AP在M2巨噬细胞中高表达,可作为预测胶质瘤患者预后和免疫治疗反应的潜在生物标志物。
    BACKGROUND: Treatment of gliomas, the most prevalent primary malignant neoplasm of the central nervous system, is challenging. Arachidonate 5-lipoxygenase activating protein (ALOX5AP) is crucial for converting arachidonic acid into leukotrienes and is associated with poor prognosis in multiple cancers. Nevertheless, its relationship with the prognosis and the immune microenvironment of gliomas remains incompletely understood.
    METHODS: The differential expression of ALOX5AP was evaluated based on public Databases. Kaplan-Meier, multivariate Cox proportional hazards regression analysis, time-dependent receiver operating characteristic, and nomogram were used to estimate the prognostic value of ALOX5AP. The relationship between ALOX5AP and immune infiltration was calculated using ESTIMATE and CIBERSORT algorithms. Relationships between ALOX5AP and human leukocyte antigen molecules, immune checkpoints, tumor mutation burden, TIDE score, and immunophenoscore were calculated to evaluate glioma immunotherapy response. Single gene GSEA and co-expression network-based GO and KEGG enrichment analysis were performed to explore the potential function of ALOX5AP. ALOX5AP expression was verified using multiplex immunofluorescence staining and its prognostic effects were confirmed using a glioma tissue microarray.
    RESULTS: ALOX5AP was highly expressed in gliomas, and the expression level was related to World Health Organization (WHO) grade, age, sex, IDH mutation status, 1p19q co-deletion status, MGMTp methylation status, and poor prognosis. Single-cell RNA sequencing showed that ALOX5AP was expressed in macrophages, monocytes, and T cells but not in tumor cells. ALOX5AP expression positively correlated with M2 macrophage infiltration and poor immunotherapy response. Immunofluorescence staining demonstrated that ALOX5AP was upregulated in WHO higher-grade gliomas, localizing to M2 macrophages. Glioma tissue microarray confirmed the adverse effect of ALOX5AP in the prognosis of glioma.
    CONCLUSIONS: ALOX5AP is highly expressed in M2 macrophages and may act as a potential biomarker for predicting prognosis and immunotherapy response in patients with glioma.
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  • 文章类型: Journal Article
    经典霍奇金淋巴瘤(cHL)中的霍奇金和里德-斯特恩伯格(HRS)细胞积极修饰免疫肿瘤微环境(TME),吸引免疫抑制细胞并表达抑制分子。骨髓细胞在TME中的高频率与不良预后相关。但是更具体和稀有的细胞群缺乏精确的标记。已在cHL患者的外周血中鉴定出髓源性抑制细胞(MDSCs),它们似乎与疾病侵袭性相关。TNFRSF9(CD137)是由单核细胞和树突细胞表达的T细胞共刺激物。其在HRS细胞中的表达也有描述,它被认为在减少抗肿瘤反应中起作用。这里,我们对淋巴细胞和MDSC亚型进行定性和定量分析,并使用多重免疫荧光和自动多光谱成像确定cHL原发肿瘤中CD137细胞的分布.结果与患者的临床特征相关。细胞用特定的免疫检查点标记(PD-1,PD-L1,CD137)染色,肿瘤浸润T淋巴细胞(CD3,PD-1),和单核细胞/MDSC(CD68、CD14、CD33、Arg-1、CD11b)。这种方法使我们能够识别不同的表型,并分析免疫亚群和肿瘤细胞之间的空间相互作用。结果证实CD137表达由T,单核细胞和HRS细胞。此外,CD137的表达,T细胞耗尽,恶性HRS细胞附近的单核细胞MDSCs(m-MDSCs)与预后较差有关。我们的发现揭示了介导免疫逃逸的TME的新元素,并确认CD137是cHL免疫治疗的候选靶标。
    表达CD137的免疫细胞和HRS细胞在难治性患者中比在应答者中更丰富且更接近。单核细胞髓源性抑制细胞(m-MDSC)与cHL的不良结果和复发有关,与粒细胞性MDSCs(g-MDSCs)不同,在非应答者中远离HRS细胞。cHL肿瘤微环境通过整体驱动极化和/或募集几种细胞类型并增加CD137和PD-L1检查点的表达来促进难治性患者的免疫逃逸。
    The Hodgkin and Reed - Sternberg (HRS) cells in classical Hodgkin Lymphoma (cHL) actively modify the immune tumor microenvironment (TME) attracting immunosuppressive cells and expressing inhibitory molecules. A high frequency of myeloid cells in the TME is correlated with an unfavorable prognosis, but more specific and rare cell populations lack precise markers. Myeloid-derived suppressor cells (MDSCs) have been identified in the peripheral blood of cHL patients, where they appear to be correlated with disease aggressiveness. TNFRSF9 (CD137) is a T cell co-stimulator expressed by monocytic and dendritic cells. Its expression has also been described in HRS cells, where it is thought to play a role in reducing antitumor responses. Here, we perform qualitative and quantitative analyses of lymphocytic and MDSC subtypes and determine the CD137 cell distribution in cHL primary tumors using multiplex immunofluorescence and automated multispectral imaging. The results were correlated with patients\' clinical features. Cells were stained with specific panels of immune checkpoint markers (PD-1, PD-L1, CD137), tumor-infiltrating T lymphocytes (CD3, PD-1), and monocytic cells/MDSCs (CD68, CD14, CD33, Arg-1, CD11b). This approach allowed us to identify distinct phenotypes and to analyze spatial interactions between immune subpopulations and tumor cells. The results confirm CD137 expression by T, monocytic and HRS cells. In addition, the expression of CD137, T exhausted cells, and monocytic MDSCs (m-MDSCs) in the vicinity of malignant HRS cells were associated with a worse prognosis. Our findings reveal new elements of the TME that mediate immune escape, and confirm CD137 as a candidate target for immunotherapy in cHL.
    CD137-expressing immune cells and HRS cells are more abundant and in closer proximity in refractory patients than in responders.Monocytic myeloid-derived suppressor cells (m-MDSCs) are associated with unfavorable outcomes and relapse in cHL, unlike granulocytic MDSCs (g-MDSCs), which are located far from HRS cells in non-responders.The cHL tumor microenvironment promotes immune escape in refractory patients by holistically driving polarization and/or recruitment of several cell types with increased expression of CD137 and PD-L1 checkpoints.
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  • 文章类型: Journal Article
    骨肉瘤(OS)化疗反应的评估,根据活细胞的平均百分比,是有限的,因为它忽略了肿瘤细胞反应的空间异质性(抗性细胞的病灶),免疫微环境和骨骼微结构。尽管对化疗的反应有积极的分类,一些患者出现早期转移性复发,证明我们用于评估治疗反应的常规工具不足.我们研究了肿瘤细胞之间的相互作用,免疫细胞(淋巴细胞,组织细胞,破骨细胞),使用多重和常规免疫组织化学(CD8,CD163,CD68,SATB2)在18个骨肉瘤手术切除样本中和骨细胞外基质(ECM),结合多尺度表征方法对治疗的反应好和差(GRT/PRT)。GRT和PRT定义为<10%和≥10%的活肿瘤细胞的亚区域,分别。在这些区域中评估了骨ECM孔隙率与免疫细胞密度之间的局部相关性。然后将免疫细胞密度与患者总体存活相关联。确定了组织细胞和破骨细胞的两种模式。在反应不佳(PR)的患者中,CD68破骨细胞密度超过CD163组织细胞,但与骨ECM负荷无关。相反,在良好反应者(GR)患者中,CD163组织细胞比CD68破骨细胞更多。对他们俩来说,发现与骨ECM孔隙率呈显著负相关(p<0.01)。此外,在PRT,多核破骨细胞呈圆形,并与肿瘤细胞混合,而在GRT中,它们被拉长并与骨小梁紧密接触。转移性患者和最初被认为是GR但很快死于疾病的患者的CD8水平总是很低。骨ECM内组织细胞和破骨细胞的特异性募集,CD8水平代表骨肉瘤对治疗反应的新特征。相关的预后特征应整合到患者的治疗分层算法中,手术后。
    The assessment of chemotherapy response in osteosarcoma (OS), based on the average percentage of viable cells, is limited, as it overlooks the spatial heterogeneity of tumor cell response (foci of resistant cells), immune microenvironment, and bone microarchitecture. Despite the resulting positive classification for response to chemotherapy, some patients experience early metastatic recurrence, demonstrating that our conventional tools for evaluating treatment response are insufficient. We studied the interactions between tumor cells, immune cells (lymphocytes, histiocytes, and osteoclasts), and bone extracellular matrix (ECM) in 18 surgical resection samples of OS using multiplex and conventional immunohistochemistry (IHC: CD8, CD163, CD68, and SATB2), combined with multiscale characterization approaches in territories of good and poor response (GRT/PRT) to treatment. GRT and PRT were defined as subregions with <10% and ≥10% of viable tumor cells, respectively. Local correlations between bone ECM porosity and density of immune cells were assessed in these territories. Immune cell density was then correlated to overall patient survival. Two patterns were identified for histiocytes and osteoclasts. In poor responder patients, CD68 osteoclast density exceeded that of CD163 histiocytes but was not related to bone ECM load. Conversely, in good responder patients, CD163 histiocytes were more numerous than CD68 osteoclasts. For both of them, a significant negative local correlation with bone ECM porosity was found (P < ,01). Moreover, in PRT, multinucleated osteoclasts were rounded and intermingled with tumor cells, whereas in GRT, they were elongated and found in close contact with bone trabeculae. CD8 levels were always low in metastatic patients, and those initially considered good responders rapidly died from their disease. The specific recruitment of histiocytes and osteoclasts within the bone ECM, and the level of CD8 represent new features of OS response to treatment. The associated prognostic signatures should be integrated into the therapeutic stratification algorithm of patients after surgery.
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  • 文章类型: Journal Article
    背景:调节性T细胞(Tregs)和邻近细胞之间的相互作用,这对抗肿瘤免疫至关重要,与患者预后密切相关,还有待充分阐明。
    方法:对261名可手术的非小细胞肺癌患者进行多重免疫荧光(mIF)染色,并评估了Tregs与肿瘤微环境(TME)中邻近细胞之间的相互作用。采用各种机器学习算法,我们开发了一种空间免疫特征来预测NSCLC患者的预后.此外,我们探讨了程序性死亡-1/程序性死亡配体-1(PD-1/PD-L1)相互作用之间的相互作用及其与Tregs的关系.
    结果:生存分析显示,在NSCLC患者中,Tregs与侵袭性边缘(IM)和肿瘤中心的邻近细胞之间的相互作用与复发相关。我们整合了三种算法的交集,以识别IM中四个关键的空间免疫特征[P(CD8TregtoCK),IM中P(CD8+Treg至CD4),IM中的N(CD4+Treg至CK),IM中的N(CD4+TcontoCK)],并利用这些特征建立SIS,NSCLC患者复发的独立预测因子[HR=2.34,95%CI(1.53,3.58),P<0.001]。此外,细胞相互作用的分析表明,较高数量的Treg导致较高的PD-L1+细胞被PD-1+细胞包围(P<0.001),距离较短(P=0.004)。
    结论:我们剖析了TME内的细胞相互作用网络,揭示Tregs和相邻细胞之间的空间结构和复杂的相互作用,以及它们对NSCLC患者预后的影响。
    BACKGROUND: The interplay between regulatory T cells (Tregs) and neighboring cells, which is pivotal for anti-tumor immunity and closely linked to patient prognosis, remains to be fully elucidated.
    METHODS: Tissue microarrays of 261 operable NSCLC patients were stained by multiplex immunofluorescence (mIF) assay, and the interaction between Tregs and neighboring cells in the tumor microenvironment (TME) was evaluated. Employing various machine learning algorithms, we developed a spatial immune signature to predict the prognosis of NSCLC patients. Additionally, we explored the interplay between programmed death-1/programmed death ligand-1 (PD-1/PD-L1) interactions and their relationship with Tregs.
    RESULTS: Survival analysis indicated that the interplay between Tregs and neighboring cells in the invasive margin (IM) and tumor center was associated with recurrence in NSCLC patients. We integrated the intersection of the three algorithms to identify four crucial spatial immune features [P(CD8+Treg to CK) in IM, P(CD8+Treg to CD4) in IM, N(CD4+Treg to CK) in IM, N(CD4+Tcon to CK) in IM] and employed these characteristics to establish SIS, an independent prognosticator of recurrence in NSCLC patients [HR = 2.34, 95% CI (1.53, 3.58), P < 0.001]. Furthermore, analysis of cell interactions demonstrated that a higher number of Tregs contributed to higher PD-L1+ cells surrounded by PD-1+ cells (P < 0.001) with shorter distances (P = 0.004).
    CONCLUSIONS: We dissected the cell interplay network within the TME, uncovering the spatial architecture and intricate interactions between Tregs and neighboring cells, along with their impact on the prognosis of NSCLC patients.
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  • 文章类型: Journal Article
    结直肠癌(CRC)是最常见的癌症之一。但目前仍缺乏能够识别有复发风险患者的预后生物标志物.在这项研究中,我们旨在更详细地研究肿瘤内T细胞之间的空间关系,癌细胞,和癌细胞标志作为III期结直肠癌患者的预后生物标志物。我们以单细胞分辨率对接受5-氟尿嘧啶(5FU)辅助化疗的III期CRC患者切除的固定组织进行了56种蛋白质标记物的多重成像。图像进行了肿瘤分割,基质,和免疫细胞,和癌细胞状态蛋白标志物表达在细胞水平定量。我们开发了一个Python软件包来估计空间接近度,最近邻分析集中在单细胞水平的癌细胞-T细胞相互作用。在我们的发现队列中(纪念斯隆·凯特琳的样本),我们处理了221例接受5FU辅助治疗的III期患者的462份核心样本(细胞总数:1,669,228).验证队列(HuntsvilleClearview癌症中心样品)由来自98个III期CRC患者的272个样品(细胞总数:853,398)组成。虽然细胞毒性T细胞的百分比(在整个癌症核心)之间存在关联的趋势,未达到显著性(发现队列:p=0.07;验证队列:p=0.19).接下来,我们利用基于区域的最近邻方法来确定细胞毒性T细胞之间的空间关系。辅助性T细胞,和癌细胞簇。在这两个队列中,我们发现细胞毒性T细胞之间的距离较短,T辅助细胞,癌细胞与无病生存率的增加显著相关。一种无监督训练模型,根据免疫细胞和癌细胞之间的中位距离对患者进行聚类,以及蛋白质表达谱,成功将患者分为低危组和高危组(发现队列:p=0.01;验证队列:p=0.003).©2024作者(S)。由JohnWiley&SonsLtd代表英国和爱尔兰病理学会出版的病理学杂志。
    Colorectal cancer (CRC) is one of the most frequently occurring cancers, but prognostic biomarkers identifying patients at risk of recurrence are still lacking. In this study, we aimed to investigate in more detail the spatial relationship between intratumoural T cells, cancer cells, and cancer cell hallmarks as prognostic biomarkers in stage III colorectal cancer patients. We conducted multiplexed imaging of 56 protein markers at single-cell resolution on resected fixed tissue from stage III CRC patients who received adjuvant 5-fluorouracil (5FU)-based chemotherapy. Images underwent segmentation for tumour, stroma, and immune cells, and cancer cell \'state\' protein marker expression was quantified at a cellular level. We developed a Python package for estimation of spatial proximity, nearest neighbour analysis focusing on cancer cell-T-cell interactions at single-cell level. In our discovery cohort (Memorial Sloan Kettering samples), we processed 462 core samples (total number of cells: 1,669,228) from 221 adjuvant 5FU-treated stage III patients. The validation cohort (Huntsville Clearview Cancer Center samples) consisted of 272 samples (total number of cells: 853,398) from 98 stage III CRC patients. While there were trends for an association between the percentage of cytotoxic T cells (across the whole cancer core), it did not reach significance (discovery cohort: p = 0.07; validation cohort: p = 0.19). We next utilised our region-based nearest neighbour approach to determine the spatial relationships between cytotoxic T cells, helper T cells, and cancer cell clusters. In both cohorts, we found that shorter distance between cytotoxic T cells, T helper cells, and cancer cells was significantly associated with increased disease-free survival. An unsupervised trained model that clustered patients based on the median distance between immune cells and cancer cells, as well as protein expression profiles, successfully classified patients into low-risk and high-risk groups (discovery cohort: p = 0.01; validation cohort: p = 0.003). © 2024 The Author(s). The Journal of Pathology published by John Wiley & Sons Ltd on behalf of The Pathological Society of Great Britain and Ireland.
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  • 文章类型: Journal Article
    MHCI类(MHC-I)损失在非小细胞肺癌(NSCLC)中是常见的,使得肿瘤细胞对T细胞裂解具有抗性。NK细胞杀死MHC-I缺陷的肿瘤细胞,尽管以前的工作表明它们存在于NSCLC边缘,他们功能受损。内,我们评估了NK细胞和CD8T细胞的浸润和活化是否随MHC-I表达而变化。
    我们使用单染色免疫组织化学(IHC)和Kaplan-Meier分析来测试NK细胞和CD8T细胞浸润对总体和无病存活的影响。为了描述MHC-I不同肺癌的免疫协变量,我们使用多重免疫荧光(mIF)成像,然后进行多变量统计建模.为了确定IFNγ激活和非激活淋巴细胞之间的浸润和细胞间通讯的差异,我们开发了一个计算管道,从mIF图像中枚举单细胞邻域,然后进行多元判别分析。
    肿瘤细胞MHC-I表达的空间定量揭示了肿瘤内和肿瘤间的异质性,这与局部淋巴细胞景观有关。IHC分析显示,患者肿瘤中的高CD56+细胞数量与无病生存率(DFS)(HR=0.58,p=0.064)和总体生存率(OS)(HR=0.496,p=0.041)呈正相关。OS相关性随着CD56+和CD8+细胞的高计数而增强(HR=0.199,p<1×10-3)。mIF成像和多变量判别分析显示在MHC-I携带肿瘤中CD3+CD8+T细胞和CD3-CD56+NK细胞富集(p<0.05)。为了推断功能细胞状态和本地细胞间通信的关联,我们分析了空间单细胞邻域谱来描绘IFNγ+/-NK细胞和T细胞的细胞环境。我们发现,与IFNγ-NK细胞和CD8T细胞相比,IFNγNK和CD8T细胞与其他IFNγ淋巴细胞的相关性更高(p<1×10-30)。此外,IFNγ+淋巴细胞最常聚集在MHC-I+肿瘤细胞附近。
    肿瘤浸润NK细胞和CD8T细胞共同影响NSCLC肿瘤进展的控制。NK和CD8T细胞的联合在携带MHC-I的肿瘤中最为明显,尤其是在IFNγ的存在下。在近邻分析中IFNγ+NK细胞与其他IFNγ+淋巴细胞的频繁共定位表明NSCLC淋巴细胞活化是协同调节的。
    MHC-I丢失在NSCLC中经常发生,并且与肿瘤微环境(TME)中免疫力下降相对应。NK细胞识别“自身缺失”靶标,并可用于靶向MHC-I缺失的NSCLC肿瘤。虽然NK细胞在肿瘤边缘的存在已被证明在NSCLC中,他们被证明在这种环境中失去了功能。
    我们开发了空间分析管道,利用TME在单细胞分辨率下的局部异质性来测试NK细胞和T细胞是否共同促进NSCLC的抗肿瘤免疫。我们发现高密度的肿瘤浸润NK细胞与DFS相对应,这种相关性在高符合CD8T细胞的患者中增加,尤其是中央肿瘤。有趣的是,在带有MHC-I的肿瘤中发现两种细胞类型聚集在一起,特别是当两者都表达IFNγ时,提示协调的淋巴细胞活性可能增强NSCLC的免疫控制。
    这项研究为开发同时增加NK和T细胞抗肿瘤免疫的新型免疫疗法提供了理论基础。NK细胞与NSCLC患者生存和免疫效应活性增加的关联,甚至在MHC-I缺陷的肿瘤中,进一步强调需要设计和部署NK细胞激活策略,这些策略可能在CD8T细胞难治性NSCLC中非常有效.
    UNASSIGNED: MHC class I (MHC-I) loss is frequent in non-small cell lung cancer (NSCLC) rendering tumor cells resistant to T cell lysis. NK cells kill MHC-I-deficient tumor cells, and although previous work indicated their presence at NSCLC margins, they were functionally impaired. Within, we evaluated whether NK cell and CD8 T cell infiltration and activation vary with MHC-I expression.
    UNASSIGNED: We used single-stain immunohistochemistry (IHC) and Kaplan-Meier analysis to test the effect of NK cell and CD8 T cell infiltration on overall and disease-free survival. To delineate immune covariates of MHC-I-disparate lung cancers, we used multiplexed immunofluorescence (mIF) imaging followed by multivariate statistical modeling. To identify differences in infiltration and intercellular communication between IFNγ-activated and non-activated lymphocytes, we developed a computational pipeline to enumerate single cell neighborhoods from mIF images followed by multivariate discriminant analysis.
    UNASSIGNED: Spatial quantitation of tumor cell MHC-I expression revealed intra- and inter-tumoral heterogeneity, which was associated with the local lymphocyte landscape. IHC analysis revealed that high CD56+ cell numbers in patient tumors were positively associated with disease-free survival (DFS) (HR=0.58, p=0.064) and overall survival (OS) (HR=0.496, p=0.041). The OS association strengthened with high counts of both CD56+ and CD8+ cells (HR=0.199, p<1×10-3). mIF imaging and multivariate discriminant analysis revealed enrichment of both CD3+CD8+ T cells and CD3-CD56+ NK cells in MHC-I-bearing tumors (p<0.05). To infer associations of functional cell states and local cell-cell communication, we analyzed spatial single cell neighborhood profiles to delineate the cellular environments of IFNγ+/- NK cells and T cells. We discovered that both IFNγ+ NK and CD8 T cells were more frequently associated with other IFNγ+ lymphocytes in comparison to IFNγ- NK cells and CD8 T cells (p<1×10-30). Moreover, IFNγ+ lymphocytes were most often found clustered near MHC-I+ tumor cells.
    UNASSIGNED: Tumor-infiltrating NK cells and CD8 T cells jointly affected control of NSCLC tumor progression. Co-association of NK and CD8 T cells was most evident in MHC-I-bearing tumors, especially in the presence of IFNγ. Frequent co-localization of IFNγ+ NK cells with other IFNγ+ lymphocytes in near-neighbor analysis suggests NSCLC lymphocyte activation is coordinately regulated.
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  • 文章类型: Journal Article
    乳腺癌构成了全球健康挑战,然而,种族对肿瘤微环境(TME)的影响仍未得到充分研究。在这次调查中,我们检查了230份乳腺癌样本中的免疫细胞浸润,强调不同的民族。利用组织微阵列(TMA)和核心样品,我们应用多重免疫荧光(mIF)来解剖跨TME区域的免疫细胞亚型。我们的分析揭示了不同的免疫细胞分布模式,特别是富含侵袭性分子亚型三阴性和HER2阳性肿瘤。我们观察到免疫细胞丰度与关键临床病理参数之间存在显着相关性,包括肿瘤大小,淋巴结受累,和患者总体生存率。值得注意的是,不同TME区域的免疫细胞位置与临床病理参数有不同的相关性.此外,种族表现出不同的细胞分布,与其他种族相比,某些种族表现出更高的丰度。在TMA样品中,中国和加勒比裔患者的B细胞数量明显减少,TAM,和FOXP3阳性细胞。这些发现强调了免疫细胞和乳腺癌进展之间复杂的相互作用,对个性化治疗策略的影响。往前走,集成先进的成像技术,探索不同种族群体的免疫细胞异质性可以发现新的免疫特征,并指导量身定制的免疫治疗干预措施,最终改善乳腺癌的管理。
    Breast cancer poses a global health challenge, yet the influence of ethnicity on the tumor microenvironment (TME) remains understudied. In this investigation, we examined immune cell infiltration in 230 breast cancer samples, emphasizing diverse ethnic populations. Leveraging tissue microarrays (TMAs) and core samples, we applied multiplex immunofluorescence (mIF) to dissect immune cell subtypes across TME regions. Our analysis revealed distinct immune cell distribution patterns, particularly enriched in aggressive molecular subtypes triple-negative and HER2-positive tumors. We observed significant correlations between immune cell abundance and key clinicopathological parameters, including tumor size, lymph node involvement, and patient overall survival. Notably, immune cell location within different TME regions showed varying correlations with clinicopathologic parameters. Additionally, ethnicities exhibited diverse distributions of cells, with certain ethnicities showing higher abundance compared to others. In TMA samples, patients of Chinese and Caribbean origin displayed significantly lower numbers of B cells, TAMs, and FOXP3-positive cells. These findings highlight the intricate interplay between immune cells and breast cancer progression, with implications for personalized treatment strategies. Moving forward, integrating advanced imaging techniques, and exploring immune cell heterogeneity in diverse ethnic cohorts can uncover novel immune signatures and guide tailored immunotherapeutic interventions, ultimately improving breast cancer management.
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  • 文章类型: Journal Article
    破译化疗诱导的肿瘤微环境(TME)中调节性T细胞(Tregs)的调节是至关重要的。这可能有助于提高新辅助化学免疫疗法在可切除的非小细胞肺癌(NSCLC)中的疗效。我们回顾性收集II-IIINSCLC患者的标本,构成两个队列:新辅助化疗(NAC)队列(N=141)活检(N=58)和术后标本(N=141),和仅手术队列(N=122)作为对照组。然后,细胞密度(Dens),入渗评分(InS),和Treg细胞接近度评分(TrPS)使用一组多重荧光染色(Foxp3,CD4,CD8,CK,CD31,符合SMA)。随后,分析了Tregs与癌微血管(CMV)和癌相关成纤维细胞(CAFs)的相关性.接受NAC治疗的患者在配对(P<0.001)和非配对分析(P=0.022)中都有较高的Treg密度。此外,接受NAC治疗的患者表现出更高的浸润评分(配对,P<0.001;未配对,P=0.014)和更多的CD8+T细胞周围的Tregs(配对/未配对,两者P<0.001)。亚组分析表明,直径≤5cm的肿瘤表现出Dens(Treg)和InS(Treg)的增加,和吉西他滨,培美曲塞和紫杉醇增强NAC后的Dens(Treg)和TrPS(CD8)。多变量分析确定Dens(Tregs),InS(Tregs)和TrPS(CD8)与更好的化疗反应显着相关[OR=8.54,95CI(1.69,43.14),P=0.009;OR=7.14,95CI(1.70,30.08),P=0.024;OR=5.50,95CI(1.09,27.75),P=0.039,分别]和阳性无复发生存率[HR=3.23,95CI(1.47,7.10),P=0.004;HR=2.70;95CI(1.27,5.72);P=0.010;HR=2.55,95CI(1.21,5.39),P=0.014,分别]。此外,TrPS(CD8)和TrPS(CD4)与CMV和CAFs呈负相关。这些发现加深了我们对化疗的免疫调节作用的理解,并强调化疗后Tregs的空间景观变化应考虑到个性化免疫治疗。旨在最终改善NSCLC患者的临床预后。
    It is crucial to decipher the modulation of regulatory T cells (Tregs) in tumor microenvironment (TME) induced by chemotherapy, which may contribute to improving the efficacy of neoadjuvant chemoimmunotherapy in resectable non-small cell lung cancer (NSCLC). We retrospectively collected specimens from patients with II-III NSCLC, constituting two cohorts: a neoadjuvant chemotherapy (NAC) cohort (N = 141) with biopsy (N = 58) and postoperative specimens (N = 141), and a surgery-only cohort (N = 122) as the control group. Then, the cell density (Dens), infiltration score (InS), and Treg-cell proximity score (TrPS) were conducted using a panel of multiplex fluorescence staining (Foxp3, CD4, CD8, CK, CD31, ɑSMA). Subsequently, the association of Tregs with cancer microvessels (CMVs) and cancer-associated fibroblasts (CAFs) was analyzed. Patients with NAC treatment have a higher density of Tregs in both paired (P < 0.001) and unpaired analysis (P = 0.022). Additionally, patients with NAC treatment showed higher infiltration score (paired, P < 0.001; unpaired, P = 0.014) and more CD8+T cells around Tregs (paired/unpaired, both P < 0.001). Subgroup analysis indicated that tumors with a diameter of ≤ 5 cm exhibited increase in both Dens(Treg) and InS(Treg), and gemcitabine, pemetrexed and taxel enhanced Dens(Treg) and TrPS(CD8) following NAC. Multivariate analysis identified that the Dens(Tregs), InS(Tregs) and TrPS(CD8) were significantly associated with better chemotherapy response [OR = 8.54, 95%CI (1.69, 43.14), P = 0.009; OR = 7.14, 95%CI (1.70, 30.08), P = 0.024; OR = 5.50, 95%CI (1.09, 27.75), P = 0.039, respectively] and positive recurrence-free survival [HR = 3.23, 95%CI (1.47, 7.10), P = 0.004; HR = 2.70; 95%CI (1.27, 5.72); P = 0.010; HR = 2.55, 95%CI (1.21, 5.39), P = 0.014, respectively]. Moreover, TrPS(CD8) and TrPS(CD4) were negatively correlated with the CMVs and CAFs. These discoveries have deepened our comprehension of the immune-modulating impact of chemotherapy and underscored that the modified spatial landscape of Tregs after chemotherapy should be taken into account for personalized immunotherapy, aiming to ultimately improve clinical outcomes in patients with NSCLC.
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