mono-infection

单一感染
  • 文章类型: Journal Article
    背景与目的人鼻病毒(HRV)是引起小儿呼吸道感染的主要原因之一,主要影响五岁以下儿童,并造成大量经济损失。在儿童中,它可以单独或作为共感染,引起从轻度到危及生命的广泛症状。在上述背景下,本研究通过将临床和分子实验室结果相关联,强调HRV单一感染在小儿急性呼吸道感染中的作用.方法本研究在三级护理教学医院进行,历时四年(2019年3月至2023年10月)。包括到门诊部就诊或被诊断为急性呼吸道感染(ARTI)的14岁以下儿童。检索并分析临床和实验室数据。收集鼻咽拭子(NPS)或咽喉拭子(TS)并将其送到维持冷链的微生物实验室。提取核酸并进行多重实时聚合酶链反应(RT-PCR)。结果在245份呼吸道病毒病原体检测样本中,52个样本的HRV检测呈阳性,其中27例患有HRV单一感染。详细研究了这27名患者的临床人口统计学细节。大多数病例(24/27;88.8%)小于5岁。发烧和呼吸急促是所有症状中最一致的症状。19例(19/27;62.9%)HRV单感染病例有潜在的合并症,都需要呼吸支持。HRV单一感染病例要么发展为毛细支气管炎,下呼吸道感染,或者肺炎。所有单一感染病例的周期阈值(Ct)<25,而与其他病毒共感染时HRV的Ct值>30。结论5岁以下儿童的HRV单感染有潜在的合并症,Ct值较低,提示疾病表现严重,应谨慎处理。
    Background and objective Human rhinovirus (HRV) is one of the leading causes of pediatric respiratory tract infection with a prevalence rate of 30-50%, mostly affecting children below five years of age and causing a substantial amount of economic loss. In children, it can alone or as a co-infection, cause a wide range of symptoms from mild to life-threatening ones. With the above background, the current study was carried out to emphasize the role of HRV mono-infection in pediatric acute respiratory tract infections by correlating clinical and molecular laboratory findings. Methods This study was carried out in a tertiary care teaching hospital over a duration of four years (March 2019-October 2023). Children up to 14 years of age visiting the outpatient department or admitted to the ward with diagnoses of acute respiratory tract infections (ARTIs) were included. The clinical and laboratory data were retrieved and analyzed. A nasopharyngeal swab (NPS) or throat swab (TS) was collected and sent to the Microbiology laboratory maintaining the cold chain. Nucleic acid was extracted and subjected to multiplex real-time polymerase chain reaction (RT-PCR). Result Of the 245 samples tested for the respiratory viral pathogen, 52 samples tested positive for HRV, of which 27 had HRV mono-infection. The clinico-demographic details of these 27 patients were studied in detail. The majority of the cases (24/27; 88.8%) were less than five years of age. Fever and shortness of breath were the most consistent symptoms in all. Nineteen (19/27; 62.9%) HRV mono-infection cases had underlying co-morbidities, all requiring respiratory support. The HRV mono-infection cases either developed bronchiolitis, lower respiratory tract infection, or pneumonia. All mono-infection cases had cycle threshold value (Ct) < 25, while the Ct value of HRV was > 30 in co-infection with other viruses. Conclusion Mono-infection of HRV in under-five children with underlying comorbidities and a lesser Ct value indicates severe disease manifestation and should be dealt with more cautiously.
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  • 文章类型: Journal Article
    背景:尿路感染(UTI)是最常见的感染之一,可引起许多肾脏系统并发症。这项研究旨在评估Al-MadinahAl-Munawarah的尿路病原体的患病率及其对抗生素的敏感性模式,沙特阿拉伯。
    方法:数据来自在Al-MadinahAl-Munawarah的KingFahadGeneralHospital就诊的UTI患者,沙特阿拉伯。在这项回顾性横断面研究中,使用自动化系统确定的UTI微生物致病因子和抗菌素耐药性概况,Phoenix和VITEK2是在2022年7月至2023年6月之间收集的。此外,最少的人口统计数据,包括收集日期和患者的性别和年龄,并使用卡方检验进行分析。
    结果:该研究包括1394名UTI阳性患者,包括50.57%的男性和49.43%的女性(卡方拟合优度,p>0.999)。对UTI阳性培养物进行微生物鉴定和抗菌药物敏感性试验。在UTI中,单一感染,由单一病原体引起,是最普遍的,占病例的88.16%,而多感染(由多种病原体引起)占11.9%。最普遍的UTI病原体是大肠杆菌(30.59%),其次是肺炎克雷伯菌(21.40%),粪肠球菌(8.46%),铜绿假单胞菌(7.81%),无乳链球菌(6.35%),屎肠球菌(3.01%),奇异变形杆菌(3.01%),阴沟肠杆菌(2.52%),念珠菌sp.(2.44%),鲍曼不动杆菌(1.95%),金黄色葡萄球菌(1.79%),产气肠杆菌(1.30%)。与其他尿路病原体共存导致尿路感染的最主要病原体是肺炎克雷伯菌和奇异疟原虫(9.32%,卡方5.550,p=0.018),肺炎克雷伯菌和铜绿假单胞菌(8.07%,卡方6.285,p=0.012),肺炎克雷伯菌和粪肠球菌(7.45%,卡方5.785,p=0.016),念珠菌sp.和屎肠球菌(4.97%,卡方9.176,p=0.002,念珠菌。和鲍曼不动杆菌(3.11%,卡方4.312,p=0.038))。在尿路病原体中,革兰氏阴性病原体对大多数测试的抗微生物剂(氨苄青霉素,头孢菌素,氟喹诺酮类药物,甲氧苄啶-磺胺甲恶唑,氨曲南,和呋喃妥因)。对头孢菌素的耐药率很高,阿莫西林-克拉维酸,和甲氧苄啶-磺胺甲恶唑.
    结论:本研究报告了Al-MadinahAl-Munawarah的UT单感染和多感染,沙特阿拉伯,主要来自革兰氏阴性细菌,肠杆菌科。大多数UT微生物菌株表现出高度抗性。
    BACKGROUND: Urinary tract infections (UTIs) are among the most common infections and can cause numerous complications of the renal system. This study aimed to assess the prevalence of uropathogens and their antibiotic susceptibility patterns in Al-Madinah Al-Munawarah, Saudi Arabia.
    METHODS: Data was collected from patients with UTIs presented at King Fahad General Hospital in Al-Madinah Al-Munawarah, Saudi Arabia. In this retrospective cross-sectional study, UTI microbial-causing agents and antimicrobial resistance profiles identified using automated systems, Phoenix and VITEK2, were collected between July 2022 and June 2023. In addition, minimal demographic data, including date of collection and sex and age of patients were collected and analyzed using Chi-square test.
    RESULTS: The study included 1394 patients positive for UTI, comprising 50.57% males and 49.43% females (chi-square goodness-of-fit, p > 0.999). Microbial identification and antimicrobial susceptibility tests were performed on UTI-positive cultures. Among UTIs, mono-infection, caused by a single pathogen, was the most prevalent, accounting for 88.16% of cases, whereas poly-infection (caused by multiple pathogens) presented at 11.9%. The most prevalent UTIs\' pathogens were E. coli (30.59%), followed by Klebsiella pneumoniae (21.40%), Enterococcus faecalis (8.46%), Pseudomonas aeruginosa (7.81%), Streptococcus agalactiae (6.35%), Enterococcus faecium (3.01%), Proteus mirabilis (3.01%), Enterobacter cloacae (2.52%), Candida sp. (2.44%), Acinetobacter calcoaceticus-baumannii (1.95%), Staphylococcus aureus (1.79%), and Enterobacter aerogenes (1.30%). The most dominant pathogens that coexisted with other uropathogens to cause UTIs were K. pneumoniae and P. mirabilis (9.32%, chi-square 5.550, p = 0.018), K. pneumoniae and P. aeruginosa (8.07%, chi-square 6.285, p = 0.012), K. pneumoniae and E. faecalis (7.45%, chi-square 5.785, p = 0.016), Candida sp. and Enterococcus faecium (4.97%, chi-square 9.176, p = 0.002, and Candida sp. and Acinetobacter calcoaceticus-baumannii (3.11%, chi-square 4.312, p=0.038)). Among the uropathogens, gram-negative pathogens showed resistance to most of the tested antimicrobials (ampicillins, cephalosporins, fluoroquinolones, trimethoprim-sulfamethoxazole, aztreonam, and nitrofurantoin). High rates of resistance were identified to cephalosporins, amoxicillin-clavulanic acid, and trimethoprim-sulfamethoxazole.
    CONCLUSIONS: This study reported UT mono-infection and poly-infection in Al-Madinah Al-Munawarah, Saudi Arabia, with a predominant representation from gram-negative bacteria, Enterobacteriaceae. Most of the UT microbial strains showed a highly resistant profile.
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  • 文章类型: Journal Article
    背景:人类博卡病毒(HBoV)主要与呼吸道感染有关。然而,其作为呼吸道病原体的作用尚不完全清楚,因为有症状患者的合并感染率高,无症状受试者的HBoV检出率高.这项研究旨在描述大量HBoV感染儿童,并比较HBoV单感染和合并感染。
    方法:我们回顾性分析了2022年3月至2023年3月在迈耶儿童医院IRCCS住院的165名诊断为HBoV感染的儿童的数据,使用逆转录qPCR从鼻拭子检测。此后,我们比较了HBoV单一感染(A组)和HBoV共感染(B组)患者的疾病严重程度,由停留时间(LOS)确定,儿科重症监护病房(PICU)的要求,和高级呼吸支持(ARS)。
    结果:中位年龄为1.5岁;80%的患者出现呼吸道症状。24h内急诊科(ED)的出院率为42.4%。大多数病例(57.6%)住院,7.3%因呼吸衰竭进入PICU。A组包括69名患者,和B组96名儿童(95%病毒共感染,2%的细菌,3%的病毒和细菌)。A组和B组住院率相似,但LOS差异显著(中位数3vs.5天)和PICU入院要求(0vs.12名患者,p<0.001)。有呼吸道疾病史的患者(17.5%)显示出明显更长的LOS和更需要吸入支气管扩张剂治疗。
    结论:HBoV应被视为相关的呼吸道病原体,尤其是在病毒共感染中。HBoV合并感染的患者需要更多的PICU入院和更长的LOS,需要高级呼吸支持的风险更高;以前的呼吸道疾病使他们住院时间更长的风险更高。
    BACKGROUND: Human Bocavirus (HBoV) is mainly associated with respiratory tract infections. However, its role as respiratory pathogen is not fully understood for a high co-infection rate in symptomatic patients and a significant HBoV detection rate in asymptomatic subjects. This study aimed to describe a large cohort of children with HBoV infection and to compare HBoV mono-infection and co-infections.
    METHODS: We retrospectively reviewed data from 165 children admitted to Meyer Children\'s Hospital IRCCS from March 2022 to March 2023 with the diagnosis of HBoV infection, detected using Reverse Transcription qPCR from nasal swabs. Thereafter, we compared patients with HBoV mono-infection (Group A) and those with HBoV co-infections (Group B) in terms of disease severity, established by the length of stay (LOS), the requirement of Pediatric Intensive Care Unit (PICU), and advanced respiratory support (ARS).
    RESULTS: The median age was 1.5 years; 80% of patients presented with respiratory symptoms. The discharge rate from the emergency department (ED) within 24 h was 42.4%. Most cases (57.6%) were hospitalized, and 7.3% were admitted to PICU due to respiratory failure. Group A comprised 69 patients, and Group B 96 children (95% viral co-infections, 2% bacterial, 3% viral and bacterial). Group A and Group B were similar in hospitalization rate but differed significantly in LOS (median 3 vs. 5 days) and requirement of PICU admission (0 vs. 12 patients, p < 0.001). Patients with a respiratory disease history (17.5%) showed significantly longer LOS and more necessity of inhaled bronchodilator therapy.
    CONCLUSIONS: HBoV should be considered a relevant respiratory pathogen especially in viral co-infections. Patients with HBoV co-infections have a higher risk of necessitating advanced respiratory support with more PICU admission and longer LOS; a previous respiratory disease puts them at a higher risk of longer hospitalization.
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  • 文章类型: Journal Article
    Wolbachia,以其在昆虫中的繁殖操纵能力而闻名,正在实施以控制登革热和基孔肯雅热。为了了解Wolbachia生物学及其作为媒介蚊子种群生物防治的效用,我们在收集的Ae中调查了其在野外的传播模式。白纹伊蚊及其在地方性登革热(DENV)传播地区世代中的母体传播功效。现场收集Ae。白纹接受PCR进行Wolbachia筛选。Ae中Wolbachia的总体平均感染频率。白纹伊蚊的比例为87.3%,其中几代母体传播模式呈趋势。χ2的趋势显示,Ae中Wolbachia感染和非感染之间存在显着差异。白纹伊蚊世代。线性回归分析显示参与强负相关,这意味着在登革热病例较高的地方,整体Wolbachia感染倾向于减少。Wolbachia感染频率的降低可能归因于几个环境因素,这可能是研究地区登革热流行的原因。这项研究报道了自然存在的Wolbachia在连续几代Ae中的传播功效。奥里萨邦的白纹病及其与登革热病例的相关性,印度。研究Wolbachia的传播趋势以及DENV的经静脉曲张传播可能表明在存在/不存在DENV的情况下Wolbachia感染的相互作用。
    Wolbachia, known for its reproductive manipulation capabilities in insects, are being implemented to control dengue and chikungunya. To understand Wolbachia biology and its utility as a bio-control for vector mosquito\'s populations, we investigated its dissemination pattern in field in collected Ae. albopictus along with its maternal transmission efficacy over generations in regions of endemic dengue (DENV) transmission. Field collected Ae. albopictus were subjected to PCR for Wolbachia screening. Overall mean Wolbachia infection frequency in Ae. albopictus was found out to be 87.3% wherein a trend was observed in the pattern of maternal transmission across generations. χ2 for trend revealed a significant variation between Wolbachia infections and non-infections in Ae. albopictus generations. Linear regression analysis revealed the involvement of a strong negative correlation, implying that overall Wolbachia infection tends to decrease in places with high dengue cases.The reduction in Wolbachia infection frequency may be attributed to several environmental factors with the probability of being the cause for endemicity of dengue in the studied areas.This study reports on the transmission efficacy of naturally occurring Wolbachia in successive generations of Ae. albopictus and its correlation with dengue cases in clusters of Odisha, India. Studying the transmission trend of Wolbachia along with transovarial transmission of DENV might be indicative towards the interplay of Wolbachia infection in presence/absence of DENV.
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  • 文章类型: Journal Article
    Parasitic infections caused by Opisthorchis viverrini and Strongyloides stercoralis remain a major public health threat in the Greater Mekong Sub-region. An understanding of climate and other environmental influences on the geographical distribution and emergence of parasitic diseases is a crucial step to guide targeted control and prevention programs. A parasitological survey was conducted from 2008 to 2013 and included 12,554 individuals (age between 20 and 60 years) from 142 villages in five districts in Khon Kaen Province, Thailand. Geographical information systems, remote sensing technologies and a Bayesian geostatistical framework were used to develop models for O. viverrini and S. stercoralis mono- and co-infections in areas where both parasites are known to co-occur. The results indicate that male sex, increased age, altitude, precipitation, and land surface temperature have influenced the infection rate and geographical distribution of mono- and co-infections of O. viverrini and S. stercoralis in this area. Males were 6.69 times (95% CrI: 5.26-8.58) more likely to have O. viverrini - S. stercoralis co-infection. We observed that O. viverrini and S. stercoralis mono-infections display distinct spatial pattern, while co-infection is predicted in the center and southeast of the study area. The observed spatial clustering of O. viverrini and S. stercoralis provides valuable information for the spatial targeting of prevention interventions in this area.
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  • 文章类型: Journal Article
    背景:免疫学人类非洲锥虫病(HAT)研究通常排除疟疾,尽管两种感染在特定流行区域重叠。在这种共感染期间,尚不清楚这种寄生相互作用是否会在人类之间诱导协同或拮抗细胞因子反应。这项研究确定了布氏罗氏锥虫HAT中恶性疟原虫疟疾的患病率以及与HAT和/或疟疾感染相关的血浆细胞因子谱水平。
    方法:参与者在乌干达东北部的Lwala医院招募:健康对照(30),疟疾(28),帽子(17),通过显微镜诊断HAT和疟疾(15),并进行PCR以鉴定寄生虫物种。干扰素-γ(IFN-γ)的血浆细胞因子水平,肿瘤坏死因子-α(TNF-α),白细胞介素(IL)-6,IL-10和转化生长因子-β(TGF-β)通过夹心酶联免疫吸附试验进行测量,并使用GraphpadPrism6.0对数据进行统计分析。
    结果:在罗氏T.RhodesienseHAT病例中,恶性疟原虫的患病率很高(46.8%)。疟疾和/或HAT病例呈现显著较高的IFN-γ血浆细胞因子水平,TNF-α,IL-6、IL-10和TGF-β高于健康对照组(P<0.05)。IFN-γ水平,HAT中IL-6和IL-10明显高于疟疾(P<0.05),而TNF-α和TGF-β在HAT和疟疾之间没有显着差异(P>0.05)。共感染表达显著高于血浆IFN-γ,IL-6和IL-10水平高于疟疾(P<0.05),但与HAT单感染无明显差异(P>0.05)。与TGF-β水平不同,HAT合并感染或疟疾单一感染的TNF-α水平显着升高(P<0.05)。在共同感染中,IFN-γ与TNF-α和IL-6与IL-10之间存在显着正相关(Spearman\'sP<0.05)。
    结论:与恶性疟原虫感染相比,T.b.rhodesense更显著地诱导细胞因子反应。共感染导致协同刺激促炎(IFN-γ,TNF-α),和相对于疟疾单一感染的抗炎(IL-6和IL-10)细胞因子反应。TNF-α的水平部分表明了由T.b.Rhodesiense和恶性疟原虫单一感染或共同感染的协同相互作用所诱导的作用,这可能对发病机理产生不利影响。感染的预后和解决。试用登记VCD-IRC/021,26/08/2011;HS1089,16/01/2012。
    BACKGROUND: Immunological Human African Trypanosomiasis (HAT) studies often exclude malaria, although both infections overlap in specific endemic areas. During this co-infection, it is not known whether this parasitic interaction induces synergistic or antagonistic cytokine response among humans. This study determined prevalence of Plasmodium falciparum malaria among Trypanosoma brucei rhodesiense HAT and plasma cytokine profile levels associated with HAT and/or malaria infections.
    METHODS: Participants were recruited at Lwala hospital in north eastern Uganda: healthy controls (30), malaria (28), HAT (17), HAT and malaria (15) diagnosed by microscopy and PCR was carried out for parasite species identification. Plasma cytokine levels of Interferon-gamma (IFN-γ), Tumour Necrosis Factor-alpha (TNF-α), Interleukin (IL)-6, IL-10 and Transforming Growth Factor-beta (TGF-β) were measured by sandwich Enzyme-Linked Immuno Sorbent Assay and data statistically analysed using Graphpad Prism 6.0.
    RESULTS: The prevalence of P. falciparum malaria among T. rhodesiense HAT cases was high (46.8%). Malaria and/or HAT cases presented significant higher plasma cytokine levels of IFN-γ, TNF-α, IL-6, IL-10 and TGF-β than healthy controls (P < 0.05). Levels of IFN-γ, IL-6 and IL-10 were significantly elevated in HAT over malaria (P < 0.05) but no significant difference in TNF-α and TGF-β between HAT and malaria (P > 0.05). Co-infection expressed significantly higher plasma IFN-γ, IL-6, and IL-10 levels than malaria (P < 0.05) but no significant difference with HAT mono-infection (P > 0.05). The TNF-α level was significantly elevated in co-infection over HAT or malaria mono-infections (P < 0.05) unlike TGF-β level. Significant positive correlations were identified between IFN-γ verses TNF-α and IL-6 verses IL-10 in co-infection (Spearman\'s P < 0.05).
    CONCLUSIONS: The T. b. rhodesiense significantly induced the cytokine response more than P. falciparum infections. Co-infection led to synergistic stimulation of pro-inflammatory (IFN-γ, TNF-α), and anti-inflammatory (IL-6, and IL-10) cytokine responses relative to malaria mono-infection. Level of TNF-α partially indicates the effect induced by T. b. rhodesiense and P. falciparum mono-infections or a synergistic interaction of co-infections which may have adverse effects on pathogenesis, prognosis and resolution of the infections.Trial registration VCD-IRC/021, 26/08/2011; HS 1089, 16/01/2012.
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  • 文章类型: Journal Article
    Infectious diarrhea is endemic in most developing countries. We aimed to investigate the protozoan, viral, and bacterial causes of acute diarrhea in Taif, Saudi Arabia. A cross-sectional prospective 1-year study was conducted on 163 diarrheal patients of various ages. Stool samples were collected, 1 per patient, and tested for 3 protozoa, 3 viruses, and 9 bacteria with the Luminex Gastrointestinal Pathogen Panel. Overall, 53.4% (87/163) of samples were positives (20.8% protozoa, 19.6% viruses, 2.8% bacteria, and 9.8% mixed). Rotavirus (19.6%), Giardia duodenalis (16.5%), and Cryptosporidium spp. (8.5%) were the mostly detected pathogens. Adenovirus 40/41 (4.2%), Salmonella (3%), Shiga toxin-producing Escherichia coli (3%), and Entamoeba histolytica (2.4%) were also detected. Norovirus GI/II, Vibrio cholerae, Yersinia enterocolitica, and Clostridium difficile toxin A/B were not detected in any patients. All pathogens were involved in coinfections except E. histolytica. Giardia (5.5%) and rotavirus (3%) were the most commonly detected in co-infections. Enterotoxigenic E. coli (2.4%), Campylobacter spp. (2.4%), E. coli 0157 (1.8%), and Shigella spp. (1.2%) were detected in patients only as co-infections. Infections were more in children 0-4 years, less in adults <40 years, and least >40 years, with statistically significant differences in risk across age groups observed with rotavirus (P<0.001), Giardia (P=0.006), and Cryptosporidium (P=0.036) infections. Lastly, infections were not significantly more in the spring. This report demonstrates the high burden of various enteropathogens in the setting. Further studies are needed to define the impact of these findings on the clinical course of the disease.
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