molecular pharmacology

分子药理学
  • 文章类型: Journal Article
    G蛋白偶联受体(GPCRs)是关键的药理靶点,然而,由于未知的激活机制和配体,许多仍未得到充分利用。孤儿GPCRs,缺乏确定的天然配体,是研究的重中之重,识别它们的配体将有助于理解它们作为药物靶标的功能和潜力。大多数GPCRs,包括孤儿,对Gi/o/z家庭成员的夫妇,然而,目前检测其激活的方法是有限的,阻碍配体鉴定工作。我们介绍GZESTY,一个高度敏感的,以易于交付的形式开发的基于细胞的测定,旨在研究Gi/o/z偶联的GPCRs的药理学并帮助去孤化。我们优化了测定条件,并采用新型克隆方法开发了一体化载体,以确保GZESTY成分的正确表达率。GZESTY成功评估了配体激活的GPCRs文库的激活,检测完全和部分激动,以及内源性GPCRs的反应。值得注意的是,使用GZESTY,我们确定了脑提取物中GPR176和GPR37的内源性配体的存在,验证其在去孤儿化工作中的用途。该测定增强了寻找孤儿GPCRs配体的能力,扩展GPCR药理学家的工具包。
    G protein-coupled receptors (GPCRs) are key pharmacological targets, yet many remain underutilized due to unknown activation mechanisms and ligands. Orphan GPCRs, lacking identified natural ligands, are a high priority for research, as identifying their ligands will aid in understanding their functions and potential as drug targets. Most GPCRs, including orphans, couple to Gi/o/z family members, however current assays to detect their activation are limited, hindering ligand identification efforts. We introduce GZESTY, a highly sensitive, cell-based assay developed in an easily deliverable format designed to study the pharmacology of Gi/o/z-coupled GPCRs and assist in deorphanization. We optimized assay conditions and developed an all-in-one vector employing novel cloning methods to ensure the correct expression ratio of GZESTY components. GZESTY successfully assessed activation of a library of ligand-activated GPCRs, detecting both full and partial agonism, as well as responses from endogenous GPCRs. Notably, with GZESTY we established the presence of endogenous ligands for GPR176 and GPR37 in brain extracts, validating its use in deorphanization efforts. This assay enhances the ability to find ligands for orphan GPCRs, expanding the toolkit for GPCR pharmacologists.
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  • 文章类型: English Abstract
    OBJECTIVE: To investigate the antitumor effects of human placenta hydrolysate (HPH) peptides on three hormone-dependent human cell lines: prostate adenocarcinoma, breast carcinoma, and ovarian cancer by metabolic analysis of cell cultures.
    METHODS: The effect of HPH on tumor and control tumor cell lines was evaluated. Study stages: (A) de novo peptide sequencing by collision-induced dissociation mass spectrometry; (B) detection of peptides with anti-tumor properties; (C) expert analysis of the obtained lists of peptides.
    RESULTS: Dose-dependent cytotoxic effects of HPH on three tumor cell lines are shown: PC-3 (human prostate adenocarcinomas), OAW-42 (human ovarian cancer), BT-474 (human breast carcinomas), and IC50 constants (1.3-2.8 mg/ml) were obtained. The analysis of the HPH peptide fraction showed more than 70 peptides with antitumor properties in the composition of this HPH, including kinase inhibitors: mitogen-activated protein kinases, kappa-bi nuclear factor inhibitor kinase, AKT serine/threonine kinase 1, protein kinase C zeta, interleukin-1 receptor-associated kinase 4 and cyclin-dependent kinase 1.
    CONCLUSIONS: The results of the study indicate not only the oncological safety of the HPH used in therapy but also the mild antitumor effects of this HPH at high concentrations.
    Цель. Исследовать противоопухолевые эффекты пептидов гидролизата плаценты человека (ГПЧ) на трех гормонозависимых линиях клеток человека: аденокарциномы простаты, карциномы молочной железы и рака яичника посредством метаболического анализа культур клеток. Материалы и методы. Проведены оценки эффектов ГПЧ на опухолевые и контрольные линии опухолевых клеток. Этапы исследования: (А) de novo секвенирование пептидов методом коллизионно-индуцированной диссоциации масс-спектрометрии; (Б) выявление пептидов с противоопухолевыми свойствами; (В) экспертный анализ полученных списков пептидов. Результаты. Показаны дозозависимые цитотоксические эффекты ГПЧ на трех опухолевых клеточных линиях: PC-3 (аденокарциномы простаты человека), OAW-42 (рака яичника человека), BT-474 (карциномы молочной железы человека) и получены значения констант IC50 (1,3–2,8 мг/мл). Представлены результаты анализа пептидной фракции ГПЧ, указывающие на более чем 70 пептидов с противоопухолевыми свойствами в составе данного ГПЧ (ингибиторы киназ: митоген-активируемых протеинкиназ, киназы ингибитора нуклеарного фактора каппа-би, AKT серин/треонинкиназы 1, Z-протеинкиназы C, киназы 4, ассоциированной с рецептором интерлейкина-1, и циклинзависимой киназы 1). Заключение. Результаты исследования позволяют утверждать не только онкобезопасность применения ГПЧ при терапии, но и слабые противоопухолевые эффекты данного ГПЧ, проявляющиеся при высоких концентрациях.
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  • 文章类型: Journal Article
    趋化因子受体是多种免疫性疾病的相关靶点,但是这些受体的药物消耗非常高。虽然已经进行了许多药物发现计划,由于临床无效,大多数前瞻性药物在后续研究中失败,因此,显然需要替代方法。受体功能的变构调节剂代表了新药的绝佳机会,因为它们以受控的方式调节受体激活并显示出增加的选择性,它们的药理学特征是不可逾越的。这里,我们讨论了变构配体及其调节趋化因子受体的药理学表征。如果(1)配体在体外显示出明显的变构调节迹象和(2)与内源性趋化因子相比以拓扑上不同的方式显示出结合的证据,则包括配体。我们讨论了变构配体如何在亲和力以及放射性配体结合测定中的结合动力学方面影响正构(内源性)配体的结合。此外,具体说明了它们在功能测定中对信号事件的影响以及如何阐明它们的结合位点。我们通过已发表的靶向趋化因子受体的变构配体的例子和药理学行为的假设图来证实这一点。这篇综述应作为建立表征变构配体的测定方法的有效起点,以开发更安全,更有效的趋化因子受体药物,最终,其他G蛋白偶联受体。
    Chemokine receptors are relevant targets for a multitude of immunological diseases, but drug attrition for these receptors is remarkably high. While many drug discovery programs have been pursued, most prospective drugs failed in the follow-up studies due to clinical inefficacy, and hence there is a clear need for alternative approaches. Allosteric modulators of receptor function represent an excellent opportunity for novel drugs, as they modulate receptor activation in a controlled manner and display increased selectivity, and their pharmacological profile can be insurmountable. Here, we discuss allosteric ligands and their pharmacological characterization for modulation of chemokine receptors. Ligands are included if (1) they show clear signs of allosteric modulation in vitro and (2) display evidence of binding in a topologically distinct manner compared to endogenous chemokines. We discuss how allosteric ligands affect binding of orthosteric (endogenous) ligands in terms of affinity as well as binding kinetics in radioligand binding assays. Moreover, their effects on signaling events in functional assays and how their binding site can be elucidated are specified. We substantiate this with examples of published allosteric ligands targeting chemokine receptors and hypothetical graphs of pharmacological behavior. This review should serve as an effective starting point for setting up assays for characterizing allosteric ligands to develop safer and more efficacious drugs for chemokine receptors and, ultimately, other G protein-coupled receptors.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    背景:Calycosin可能是化学治疗剂的潜在候选者,因为已经用这种天然化合物进行了一些针对多变量癌症的研究。
    目的:这篇综述简要概述了先前关于calycosin对各种癌症的潜在影响及其潜在作用机制的研究。
    方法:通过GoogleScholar的系统搜索检索到的数据,PubMed,科学直接,WebofScience,和Scopus通过使用关键词包括calycosin,癌症类型,抗癌机制,协同,药代动力学和常用的工具是BioRender,ChemDrawProfessional16.0和ADMETlab2.0。
    结果:根据我们的评论,calycosin在自然界中是可用的,对大约15种不同类型的癌症有效。一般来说,这种化合物的抗癌机制是通过多种过程介导的,包括调节凋亡途径,细胞周期,血管生成和转移,致癌基因,酶促途径,和信号转导过程。这些研究在各种研究模型中进行,包括硅,在体外,临床前和临床模型。抗癌作用背后的分子框架靶向一些致癌和治疗性蛋白质和多个信号级联。基于纳米配制的calycosin的疗法可以制造用于将该化合物递送至目标组织以及特定器官的优异纳米载体。当与其他天然化合物和一些标准药物组合时,这种天然化合物变得非常有效。此外,正确使用该化合物可以通过多种策略逆转对现有抗癌药物的耐药性。毛黄素显示出更好的药代动力学特性,在人体中毒性较小。
    结论:Calycosin作为几种癌症类型的治疗药物具有极好的潜力,应在制药市场上使用标准化学疗法之前使用。
    BACKGROUND: Calycosin may be a potential candidate regarding chemotherapeutic agent, because already some studies against multivarious cancer have been made with this natural compound.
    OBJECTIVE: This review elucidated a brief overview of previous studies on calycosin potential effects on various cancers and its potential mechanism of action.
    METHODS: Data retrieved by systematic searches of Google Scholar, PubMed, Science Direct, Web of Science, and Scopus by using keywords including calycosin, cancer types, anti-cancer mechanism, synergistic, and pharmacokinetic and commonly used tools are BioRender, ChemDraw Professional 16.0, and ADMETlab 2.0.
    RESULTS: Based on our review, calycosin is available in nature and effective against around 15 different types of cancer. Generally, the anti-cancer mechanism of this compound is mediated through a variety of processes, including regulation of apoptotic pathways, cell cycle, angiogenesis and metastasis, oncogenes, enzymatic pathways, and signal transduction process. These study conducted in various study models, including in silico, in vitro, preclinical and clinical models. The molecular framework behind the anti-cancer effect is targeting some oncogenic and therapeutic proteins and multiple signaling cascades. Therapies based on nano-formulated calycosin may make excellent nanocarriers for the delivery of this compound to targeted tissue as well as particular organ. This natural compound becomes very effective when combined with other natural compounds and some standard drugs. Moreover, proper use of this compound can reverse resistance to existing anti-cancer drugs through a variety of strategies. Calycosin showed better pharmacokinetic properties with less toxicity in human bodies.
    CONCLUSIONS: Calycosin exhibits excellent potential as a therapeutic drug against several cancer types and should be consumed until standard chemotherapeutics are available in pharma markets.
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  • 文章类型: Journal Article
    83人nNOS的结构,人eNOS的55个结构,iNOS的13个结构,总结并分析了约126种已报道的NOS结合化合物。结构和统计分析表明,每种分析化合物的至少一个拷贝结合人NOS的活性位点(底物精氨酸结合位点)。三种同工型的结合特征表现出差异,但是化合物的结合偏好并不有助于抑制剂设计靶向nNOS和iNOS,或针对针对eNOS的激活剂设计。这项研究表明,人类NOS亚型的加氧酶结构域之间具有很强的结构和功能相似性,尤其是建筑,残渣成分,尺寸,形状,和疏水性的分布曲线,活性位点的极性和电荷。抑制剂相对于其余同种型的选择性和效力很大程度上依赖于偶然性和随机性。通过合理改进进一步提高选择性是不确定的,不可预测和不可靠,因此,通过靶向这个位点实现高选择性是复杂的,需要联合研究。通过对目前NOS中的两个靶向位点的分析,高度保守的精氨酸结合袋和H4B结合袋,基于结构和序列分析提出了新的潜在药物靶向位点。对人NOS和结合化合物的结构和相互作用谱的全面分析为药物发现和药理学研究提供了新的见解。这里的新发现实际上被应用于指导基于蛋白质结构的药物发现。
    83 Structures of human nNOS, 55 structures of human eNOS, 13 structures of iNOS, and about 126 reported NOS-bound compounds are summarized and analyzed. Structural and statistical analysis show that, at least one copy of each analyzed compound binds to the active site (the substrate arginine binding site) of human NOS. And binding features of the three isoforms show differences, but the binding preference of compounds is not in the way helpful for inhibitor design targeting nNOS and iNOS, or for activator design targeting eNOS. This research shows that there is a strong structural and functional similarity between oxygenase domains of human NOS isoforms, especially the architecture, residue composition, size, shape, and distribution profile of hydrophobicity, polarity and charge of the active site. The selectivity and efficacy of inhibitors over the rest of isoforms rely a lot on chance and randomness. Further increase of selectivity via rational improvement is uncertain, unpredictable and unreliable, therefore, to achieve high selectivity through targeting this site is complicated and requires combinative investigation. After analysis on the current two targeting sites in NOS, the highly conserved arginine binding pocket and H4B binding pocket, new potential drug-targeting sites are proposed based on structure and sequence profiling. This comprehensive analysis on the structure and interaction profiles of human NOS and bound compounds provides fresh insights for drug discovery and pharmacological research, and the new discovery here is practically applied to guide protein-structure based drug discovery.
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  • 文章类型: Journal Article
    一种遗传性神经退行性疾病,称为亨廷顿氏病(HD),认知能力下降,和精神症状。它是由HTT基因的突变引起的,导致神经元中异常的亨廷顿蛋白积累。这主要影响纹状体和大脑皮层,神经元功能障碍和最终的细胞死亡随之而来。当症状首次出现在成年中期时,患者及其家人的生活质量指数受到显着影响。本文概述了HD的可用疗法。虽然HD没有已知的治疗选择,有几个试图减轻症状和减少疾病的发展。通过降低非自愿运动,像丁苯那嗪和德丁苯那嗪这样的药物治疗集中于运动症状。抗抑郁药和抗精神病药物也用于管理HD的精神和认知症状。对基于基因的前瞻性药物的研究是对疾病改善药物的研究的结果。减少突变亨廷顿蛋白的合成是RNA干扰(RNAi)策略的目标,这可能会阻止疾病的进程。此外,对聚集性定期间隔短回文重复和CRISPR相关蛋白9(CRISPR-Cas9)和其他基因编辑方法的持续研究显示,有望逆转导致HD的基因突变.患有HD的人可以从物理治疗等非药物治疗中受益,言语治疗,和职业治疗,以提高他们的功能能力和总体福祉。支持性治疗,精神病治疗,和照顾者支持小组对于解决疾病带来的难题也至关重要。总之,在HD治疗领域取得了巨大的进展,强调症状控制,疾病改变,和前瞻性的基因疗法。虽然有了很大的改善,仍然需要更多的研究来提供更好的治疗方法,并最终找到解决这种衰弱状况的方法。
    An inherited neurodegenerative ailment called Huntington\'s disease (HD) of gradual physical impairment, cognitive decline, and psychiatric symptoms. It is brought on by a mutation of the HTT gene, which causes aberrant huntingtin protein buildup in neurons. This predominantly affects the striatum and cerebral cortex, where neuronal malfunction and eventual cell death follow. The quality index of life for both patients and their families is significantly impacted when symptoms first appear in mid-adulthood. An overview of the available therapies for HD is given in this article. Although HD has no known treatment options, there are several that try to lessen symptoms and reduce the disease\'s development. By lowering involuntary movements, pharmaceutical treatments like tetrabenazine and deutetrabenazine focus on motor symptoms. Antidepressants and antipsychotic medicines are also used to manage the mental and cognitive symptoms of HD. The investigation of prospective gene-based medicines is a result of research into disease-modifying medications. Reduced synthesis of mutant huntingtin protein is the goal of RNA interference (RNAi) strategies, which may halt the course of illness. Additionally, continuing research into Clustered Regularly Interspaced Short Palindromic Repeats and CRISPR-associated protein 9 (CRISPR-Cas9) and other gene editing methods shows promise for reversing the genetic mutation that causes HD. Individuals with HD can benefit from non-pharmacological therapies such as physical therapy, speech therapy, and occupational therapy to increase their functional abilities and general well-being. Supportive treatment, psychiatric therapy, and caregiver support groups are also essential in addressing the difficult problems the illness presents. In conclusion, tremendous progress is being made in the domain of HD treatment, with an emphasis on symptom control, disease modification, and prospective gene-based therapeutics. Even though there has been significant improvement, more study is still required to provide better therapies and ultimately discover a solution for this debilitating condition.
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  • 文章类型: Journal Article
    人类以太相关基因(hERG)通道的调节,心脏心室肌细胞动作电位复极化中的关键电压门控钾通道,对心脏电生理具有重要意义,可以是抗心律失常或致心律失常。例如,hERG通道阻断是长QT综合征和潜在危及生命的心律失常的主要原因,如扭转点。相反,hERG通道阻滞是III类抗心律失常药物终止室性心动过速和纤颤的作用机制。近年来,已经认识到,具有临床潜力的致心律失常hERG受体阻滞剂或III类抗心律失常药表现得较少,除了他们的hERG阻断活性,促进hERG通道的电压依赖性激活的第二个动作。这种促进被认为通过支持动作电位的最终复极化来降低心律失常的潜力。这篇综述涵盖了hERG阻断剂/促进剂的药理学特征,促进的分子机制,以及它们的临床意义,以及离子通道药理学和药物引起的心律失常领域研究尚未解决的问题和要求。
    Modulation of the human Ether-à-go-go-Related Gene (hERG) channel, a crucial voltage-gated potassium channel in the repolarization of action potentials in ventricular myocytes of the heart, has significant implications on cardiac electrophysiology and can be either antiarrhythmic or proarrhythmic. For example, hERG channel blockade is a leading cause of long QT syndrome and potentially life-threatening arrhythmias, such as torsades de pointes. Conversely, hERG channel blockade is the mechanism of action of Class III antiarrhythmic agents in terminating ventricular tachycardia and fibrillation. In recent years, it has been recognized that less proarrhythmic hERG blockers with clinical potential or Class III antiarrhythmic agents exhibit, in addition to their hERG-blocking activity, a second action that facilitates the voltage-dependent activation of the hERG channel. This facilitation is believed to reduce the proarrhythmic potential by supporting the final repolarizing of action potentials. This review covers the pharmacological characteristics of hERG blockers/facilitators, the molecular mechanisms underlying facilitation, and their clinical significance, as well as unresolved issues and requirements for research in the fields of ion channel pharmacology and drug-induced arrhythmias.
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  • 文章类型: Journal Article
    在美国,高血压是心血管疾病发病率和死亡率的主要可补救风险因素。过量的膳食盐消耗,这是高血压的催化剂,通过活化抗原呈递细胞(APC)引发炎症级联。这种促炎性反应主要由通过上皮钠通道(ENaC)转运到APC中的钠离子(Na)和随后的NADPH氧化酶激活驱动,导致高水平的氧化应激。氧化应激,众所周知,高血压相关疾病发展的催化剂,扰乱氧化还原稳态,最终促进脂质过氧化,isolevuglandin产生和炎症反应。来自有机材料的天然药物化合物,其特点是抗炎,抗氧化,和抗诱变特性最近由于其治疗作用而在药理学界中获得了关注。黄酮类化合物,一种天然酚类化合物,具有这些治疗益处,并可能用作抗高血压药。黄酮是一种类黄酮,具有增强的抗炎作用,可以使它们作为高血压的治疗剂,包括Diosmetin,能够在几种不同的动物模型中诱导显著的动脉血管舒张。本文将重点介绍黄酮的活性,以阐明潜在的预防和治疗高血压的潜在机制。
    Hypertension is the leading remediable risk factor for cardiovascular morbidity and mortality in the United States. Excess dietary salt consumption, which is a catalyst of hypertension, initiates an inflammatory cascade via activation of antigen-presenting cells (APCs). This pro-inflammatory response is driven primarily by sodium ions (Na+) transporting into APCs by the epithelial sodium channel (ENaC) and subsequent NADPH oxidase activation, leading to high levels of oxidative stress. Oxidative stress, a well-known catalyst for hypertension-related illness development, disturbs redox homeostasis, which ultimately promotes lipid peroxidation, isolevuglandin production and an inflammatory response. Natural medicinal compounds derived from organic materials that are characterized by their anti-inflammatory, anti-oxidative, and anti-mutagenic properties have recently gained traction amongst the pharmacology community due to their therapeutic effects. Flavonoids, a natural phenolic compound, have these therapeutic benefits and can potentially serve as anti-hypertensives. Flavones are a type of flavonoid that have increased anti-inflammatory effects that may allow them to act as therapeutic agents for hypertension, including diosmetin, which is able to induce significant arterial vasodilation in several different animal models. This review will focus on the activity of flavones to illuminate potential preventative and potential therapeutic mechanisms against hypertension.
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  • 文章类型: Journal Article
    正异向协同性,或\'激活\',导致在没有蛋白质表达增加的情况下酶活性的瞬时增加。因此,细胞色素P450(CYP)酶激活是一种潜在的药物-药物相互作用机制。先前已经证明氨苯砜在体外激活许多NSAID的CYP2C9催化的氧化。这里,我们进行了分子动力学模拟(MDS)以及酶动力学研究和定点诱变,以阐明CYP2C9催化的S-氟比洛芬4'-羟基化和S-萘普生O-去甲基化的分子基础。补充重组CYP2C9与氨苯砜的孵育可将氟比洛芬和萘普生氧化的催化效率提高2.3倍和16.5倍,分别。MDS表明,活化主要来自底物之间的芳香相互作用,氨苯砜,以及CYP2C9活性位点的共同结合域内的Phe114和Phe476的苯环,而不是参与不同的效应位点。Phe114和Phe476的诱变废除了氟比洛芬和萘普生氧化,和MDS和CYP2C9突变体的动力学研究进一步确定了Phe476在氨苯砜激活中的关键作用。MD模拟还表明,萘普生的两个分子之间的芳族堆积相互作用对于以催化有利的取向结合是必需的。与氟比洛芬和萘普生相比,氨苯砜没有激活双氯芬酸的4'-羟基化,这表明CYP2C9活性位点有利于NSAIDs与平面或近平面几何结构的协同结合。更一般地说,这项工作证实了MDS在研究CYP酶中配体结合的实用性。
    Positive heterotropic cooperativity, or \"activation,\" results in an instantaneous increase in enzyme activity in the absence of an increase in protein expression. Thus, cytochrome P450 (CYP) enzyme activation presents as a potential drug-drug interaction mechanism. It has been demonstrated previously that dapsone activates the CYP2C9-catalyzed oxidation of a number of nonsteroidal anti-inflammatory drugs in vitro. Here, we conducted molecular dynamics simulations (MDS) together with enzyme kinetic investigations and site-directed mutagenesis to elucidate the molecular basis of the activation of CYP2C9-catalyzed S-flurbiprofen 4\'-hydroxylation and S-naproxen O-demethylation by dapsone. Supplementation of incubations of recombinant CYP2C9 with dapsone increased the catalytic efficiency of flurbiprofen and naproxen oxidation by 2.3- and 16.5-fold, respectively. MDS demonstrated that activation arises predominantly from aromatic interactions between the substrate, dapsone, and the phenyl rings of Phe114 and Phe476 within a common binding domain of the CYP2C9 active site, rather than involvement of a distinct effector site. Mutagenesis of Phe114 and Phe476 abrogated flurbiprofen and naproxen oxidation, and MDS and kinetic studies with the CYP2C9 mutants further identified a pivotal role of Phe476 in dapsone activation. MDS additionally showed that aromatic stacking interactions between two molecules of naproxen are necessary for binding in a catalytically favorable orientation. In contrast to flurbiprofen and naproxen, dapsone did not activate the 4\'-hydroxylation of diclofenac, suggesting that the CYP2C9 active site favors cooperative binding of nonsteroidal anti-inflammatory drugs with a planar or near-planar geometry. More generally, the work confirms the utility of MDS for investigating ligand binding in CYP enzymes.
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