molecular mechainsm

  • 文章类型: Journal Article
    简介:碧萝精(PYC),法国海洋松树的标准化提取物,传统上用于治疗炎症。然而,其主要活性成分及其作用机制尚未确定。方法:本研究采用超高效液相色谱-串联质谱(UPLC-MS/MS)和网络药理学鉴定PYC的潜在活性成分,并通过细胞实验阐明其抗炎机制。结果:鉴定出768个PYC化合物,筛选出19个抗炎化合物,其中85个靶蛋白直接参与炎症。PPI(蛋白质-蛋白质相互作用)分析确定了IL6、TNF、MMP9,IL1B,AKT1,IFNG,CXCL8、NFKB1、CCL2、IL10和PTGS2为核心靶标。KEGG(京都基因和基因组百科全书)富集分析表明,PYC中的化合物可能通过IL17和TNF信号途径发挥抗炎作用。细胞实验确定,PYC处理可以减少LPS(脂多糖)诱导的BV2细胞中IL6和IL1β的表达以减轻炎症。结论:PYC可通过多成分影响炎症,-目标,和-机制。
    Introduction: Pycnogenol (PYC), a standardized extract from French maritime pine, has traditionally been used to treat inflammation. However, its primary active components and their mechanisms of action have not yet been determined. Methods: This study employed UPLC-MS/MS (Ultra-high performance liquid chromatography-tandem mass spectrometry) and network pharmacology to identify the potential active components of PYC and elucidate their anti-inflammatory mechanisms by cell experiments. Results: 768 PYC compounds were identified and 19 anti-inflammatory compounds were screened with 85 target proteins directly involved in the inflammation. PPI (protein-protein interaction) analysis identified IL6, TNF, MMP9, IL1B, AKT1, IFNG, CXCL8, NFKB1, CCL2, IL10, and PTGS2 as core targets. KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analysis suggested that the compound in PYC might exert anti-inflammatory effects through the IL17 and TNF signal pathways. Cell experiments determined that PYC treatment can reduce the expression of IL6 and IL1β to relieve inflammation in LPS (lipopolysaccharide)-induced BV2 cells. Conclusion: PYC could affect inflammation via multi-components, -targets, and -mechanisms.
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  • 文章类型: Journal Article
    植物生长促进细菌(PGPB)的应用对于世界人口持续增长和土壤盐分增加的可持续农业至关重要。盐度是严重的非生物胁迫之一,会降低农田的生产力。植物生长促进细菌是解决这一问题的关键角色,可以减轻盐度胁迫。据报道,最高的耐盐植物生长促进细菌属于Firmicutes(约50%),变形杆菌(40%),和放线菌(10%),分别。耐盐植物生长促进细菌的最主要属是芽孢杆菌和假单胞菌。目前,越来越需要鉴定具有特殊有益特性的新型植物生长促进细菌。此外,为了在农业中有效利用植物生长促进细菌,必须定义其功能和与植物相互作用的未知分子方面。组学和元组学研究可以揭示这些未知的基因和途径。然而,更准确的组学研究需要详细了解迄今已知的植物生长促进细菌保护植物胁迫的分子机制。在这次审查中,提出了植物促生菌缓解盐分胁迫的分子基础,对20种耐盐植物生长促进细菌的基因组中鉴定的基因进行了评估,并强调了它们相关基因的普遍性。与吲哚乙酸(IAA)合成相关的基因(70%),铁载体(60%),渗透保护剂(80%),伴侣(40%),1-氨基环丙烷-1-羧酸(ACC)脱氨酶(50%),抗氧化剂(50%),磷酸盐溶解(60%),离子稳态(80%)是被评估的耐盐植物生长促进和盐分胁迫缓解细菌的基因组中最常见的检测基因。最普遍的基因可用作设计分子标记以筛选新的耐盐植物生长促进细菌的候选物。
    The application of plant growth-promoting bacteria (PGPB) is vital for sustainable agriculture with continuous world population growth and an increase in soil salinity. Salinity is one of the severe abiotic stresses which lessens the productivity of agricultural lands. Plant growth-promoting bacteria are key players in solving this problem and can mitigate salinity stress. The highest of reported halotolerant Plant growth-promoting bacteria belonged to Firmicutes (approximately 50%), Proteobacteria (40%), and Actinobacteria (10%), respectively. The most dominant genera of halotolerant plant growth-promoting bacteria are Bacillus and Pseudomonas. Currently, the identification of new plant growth-promoting bacteria with special beneficial properties is increasingly needed. Moreover, for the effective use of plant growth-promoting bacteria in agriculture, the unknown molecular aspects of their function and interaction with plants must be defined. Omics and meta-omics studies can unreveal these unknown genes and pathways. However, more accurate omics studies need a detailed understanding of so far known molecular mechanisms of plant stress protection by plant growth-promoting bacteria. In this review, the molecular basis of salinity stress mitigation by plant growth-promoting bacteria is presented, the identified genes in the genomes of 20 halotolerant plant growth-promoting bacteria are assessed, and the prevalence of their involved genes is highlighted. The genes related to the synthesis of indole acetic acid (IAA) (70%), siderophores (60%), osmoprotectants (80%), chaperons (40%), 1-aminocyclopropane-1-carboxylate (ACC) deaminase (50%), and antioxidants (50%), phosphate solubilization (60%), and ion homeostasis (80%) were the most common detected genes in the genomes of evaluated halotolerant plant growth-promoting and salinity stress-alleviating bacteria. The most prevalent genes can be applied as candidates for designing molecular markers for screening of new halotolerant plant growth-promoting bacteria.
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  • 文章类型: Editorial
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