molecular investigations

分子研究
  • 文章类型: Journal Article
    调查心源性猝死(SCD)的原因总是很困难;事实上,即使在尸检调查期间,与SCD相关的遗传性心脏病也可能是“沉默的”。在这些情况下,重要的是排除其他病因并协助要求进行基因调查。在这里,这篇综述的目的是收集SCD中最有牵连的基因,并产生一个具有一线和二线研究适应症的小组.根据系统评价的首选报告项目(PRISMA)标准,对一般人群中可能导致SCD的遗传疾病进行了系统评价。随后,当尸检结果为阴性或没有获得性心脏病的证据时,我们列出了可能在心源性猝死情况下进行测试的基因。为了使基因检测更具体、更有效,这是有用的,并要求证实尸检结果与分子调查明显在小组提议。一线研究的基因是HCM,MYBPC3,MYH7,TNNT2,TNNI3,而在DCM的情况下,最牵连的基因是LMNA和TTN,在这些CDM的第二行中,可以研究ACTN2、TPM1、C1QPB。在ACM/ARVC的情况下,分子研究包括DSP,DSG2、DSC2、RYR2、PKP2。信道病与以下基因相关:SCN5A,KCNQ1、KCNH2、KCNE1、RYR2。我们的工作强调了基因检测在法医学和临床病理学中的重要性;此外,这不仅有助于帮助病理学家做出诊断,还可以防止后代家庭中的其他SCD病例,并标准化在全球类似病例中进行的分析类型。
    Investigating the causes of Sudden cardiac death (SCD) is always difficult; in fact, genetic cardiac conditions associated with SCD could be \"silent\" even during autopsy investigation. In these cases, it is important to exclude other aetiology and assist to ask for genetic investigations. Herein, the purpose of this review is to collect the most-implicated genes in SCD and generate a panel with indications for first line and second line investigations. A systematic review of genetic disorders that may cause SCD in the general population was carried out according to the Preferred Reporting Item for Systematic Review (PRISMA) standards. We subsequently listed the genes that may be tested in the case of sudden cardiac death when the autopsy results are negative or with no evidence of acquired cardiac conditions. To make genetic tests more specific and efficient, it is useful and demanded to corroborate autopsy findings with the molecular investigation as evident in the panel proposed. The genes for first line investigations are HCM, MYBPC3, MYH7, TNNT2, TNNI3, while in case of DCM, the most implicated genes are LMNA and TTN, and in second line for these CDM, ACTN2, TPM1, C1QPB could be investigated. In cases of ACM/ARVC, the molecular investigation includes DSP, DSG2, DSC2, RYR2, PKP2. The channelopathies are associated with the following genes: SCN5A, KCNQ1, KCNH2, KCNE1, RYR2. Our work underlines the importance of genetic tests in forensic medicine and clinical pathology; moreover, it could be helpful not only to assist the pathologists to reach a diagnosis, but also to prevent other cases of SCD in the family of the descendant and to standardise the type of analysis performed in similar cases worldwide.
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  • 文章类型: Journal Article
    泪膜在眼表面和外部环境之间形成保护性屏障。尽管体积很小,分析前和分析程序的最新进展使其能够使用多种方法进行深入分析。然而,泪膜收集方法的多样性和前分析方法缺乏标准化是不同研究之间可重复结果和比较的主要障碍。在这项研究中,我们首先改进了从Schirmer条带(ScS)中提取各种分子实体的预分析程序。随后,我们的研究重点是分析两种主要泪液收集方法:毛细管(CT)和ScS之间可能发生的分子差异.此外,我们检查了ScS的不同部分来强调这些变化,这可能是开发标准化的关键因素,样品处理的优化方案。我们的结果表明,在提取过程中包含表面活性剂可以提高蛋白质提取的产量和ScS中鉴定的蛋白质数量,通过有效裂解细胞和提高几种细胞内蛋白质的溶解度。除了蛋白质,还可以回收核酸用于基因表达分析,特别是来自放置在死胡同中的ScS的灯泡区域。尽管它们的性质被稀释了,来自ScS的提取物仍然是回收泪液蛋白如IL-17A的合适材料,其水平低至fg/mL范围,由于高度敏感的免疫测定。收集方法可以影响测量的泪液蛋白水平。与通过CT收集的泪液相比,在使用ScS收集的泪液的毛细管电泳分析中发现乳铁蛋白的百分比更高(39.6±4.8%对31±4.4%)。
    The tear film forms a protective barrier between the ocular surface and the external environment. Despite its small volume, recent advancements in preanalytical and analytical procedures have enabled its in-depth analysis using multiple approaches. However, the diversity of tear film collection methods and the lack of standardization in pre-analytical methods represent the main obstacles to reproducible results and comparison among different studies. In this study, we first improved the pre-analytical procedures for the extraction of various molecular entities from Schirmer strips (ScS). Subsequently, our investigation focused on analyzing the molecular variances that might occur between two primary tear collection methods: capillary tube (CT) and ScS. Additionally, we examined different parts of the ScS to underscore these variations, which could serve as crucial factors for developing a standardized, optimized protocol for sample processing. Our results show that the inclusion of surfactants in the extraction process enhanced both the yield of protein extraction and the number of proteins identified in ScS, by effectively lysing the cells and improving the solubility of several intracellular proteins. In addition to proteins, nucleic acids could also be recovered for gene expression analyses, particularly from the bulb region of the ScS which is placed in the cul-de-sac. Despite their diluted nature, extracts from ScS remain a suitable material for retrieving tear proteins such as IL-17A at levels as low as the fg/mL range, thanks to highly sensitive immunoassays. Collection methods can affect measured tear protein levels. Lactoferrin is found in higher percentages in capillary electrophoresis analysis of tears collected using ScS compared to tears collected by CT (39.6 ± 4.8% versus 31 ± 4.4%).
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  • 文章类型: Journal Article
    严重急性呼吸道综合症冠状病毒2(SARS-CoV-2)病毒引起的冠状病毒感染被称为COVID-19,这种疾病已经在世界各地蔓延。它首先在中国发展,并迅速传播到世界各地。COVID给全球所有人的生活造成了健康负担。本文提供了许多用于检测感染的前所未有的检测技术。COVID在年轻人中产生了大量症状,青少年和老年人。由于免疫力低下,老年人容易出现致命的严重症状。有了这些目标,本文包括对大多数举措的实质性谴责描述,以创建易于诊断的诊断工具.它还为读者提供了多学科的观点,了解血清学和逆转录酶聚合酶链反应(RT-PCR)等传统方法以及诸如成簇的规则间隔短回文重复(CRISPR)/Cas和人工智能/机器学习等前线技术已用于收集信息。这个故事将激发创造性的新方法来成功检测治疗,并在广泛的操作和有抱负的生物医学科学家和工程师中预防这种大流行。
    The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus caused coronavirus infection termed as COVID-19, an illness that has spread devastation all over the world. It was developed first in China and had swiftly spread throughout the world. COVID has created imposed burden on health in the lives of all individuals around the globe. This article provides a number of unprecedented detection technologies used in the detection of infection. COVID has created a large number of symptoms in the young, adolescent as well as elderly population. Old age people are susceptible to fatal serious symptoms because of low immunity. With these goals in mind, this article includes substantial condemning descriptions of the majority of initiatives in order to create diagnostic tools for easy diagnosis. It also provides the reader with a multidisciplinary viewpoint on how traditional approaches such as serology and reverse transcriptase polymerase chain reaction (RT-PCR) along with the frontline techniques such as clustered regularly interspaced short palindromic repeats (CRISPR)/Cas and artificial intelligence/machine learning have been utilized to gather information. The story will inspire creative new ways for successful detection therapy and to prevent this pandemic among a wide audience of operating and aspiring biomedical scientists and engineers.
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  • 文章类型: Journal Article
    一种新的单蚜虫硅藻物种AchnanthildiumtineaTseplik,Kulikovskiy,Kociolek&Maltsev,sp.11月。来自印度尼西亚。该物种是根据分子和形态分析进行描述的。根据分子数据,新物种属于进化枝,其中包括微小Achnanthidium菌株,腐植酸和洋地黄。形态学上,新物种与同一属的其他物种有很大的不同,因为线性椭圆形瓣膜具有几乎平行的侧面和强烈辐射的条纹以及中缝瓣膜上的蝴蝶状筋膜。讨论了新物种的形态和系统发育,并对Achnanthidium属的分类学现状进行了思考。我们的工作表明了在硅藻系统学中使用分子数据的重要性,也表明了需要调查我们星球上很少研究的区域。
    A new monoraphid diatom species Achnanthidium tinea Tseplik, Kulikovskiy, Kociolek & Maltsev, sp. nov. is described from Indonesia. The species is described on the basis of molecular and morphological analyses. According to molecular data the new species belongs to the clade that includes strains of Achnanthidium minutissimum, Achnanthidium saprophilum and Achnanthidium digitatum. Morphologically, the new species differs quite significantly from other species of the same genus because of linear-elliptic valves with almost parallel sides and strongly radiate striae and a butterfly-shaped fascia on the raphe valve. The morphology and phylogeny of the new species are discussed, and thoughts on the current state of the taxonomy of the genus Achnanthidium are expressed. Our work shows the importance of using molecular data in diatom systematics and also demonstrates the need to investigate rarely studied regions of our planet.
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  • 文章类型: Journal Article
    Automated methodologies allowing for rapid detection of Factor V Leiden and Factor II G20210A variants are desirable, due to a high number of tested patients. Here, we report a preliminary validation of a CE-marked in vitro diagnostic (IVD) certified method for simultaneous detection of Factor V Leiden and Factor II G20210A variants on whole blood samples. The novel method is based on Loop-mediated isothermal AMPlification (LAMP) applied for a duplex detection of Factor V Leiden and Factor II G20210A variants without requiring prior DNA extraction, whereas the routine one is a TaqMan SNP genotyping targeting genomic DNA. We tested routine patients for both variants using novel and current methods and estimated concordance rate. Patients were tested under similar laboratory procedures. One hundred and eight patients referred for the thrombophilia testing in the period between 9th December 2019 to 27th February 2020 represented the study population. We routinely identified for the Factor V Leiden variant 163 wild-type, 17 heterozygotes and no homozygote. Concerning the Factor II G20210A variant, we identified 170 wild-type, nine heterozygotes and one homozygous carrier. Two heterozygotes carried both variants (double heterozygotes). The LAMP method showed a 100% concordance rate, detecting rightly all genotypes. The LAMP for a duplex detection of common thrombophilia variants shows analytic performances as good as those of the standard method.
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  • 文章类型: Journal Article
    Artificial mummification has been used since antiquity and is best known from ancient Egypt. Despite ancient Egyptian mummies being studied for several decades, the mummification techniques of that time are not well understood. Modern mummification experiments involving animal and human tissues have contributed additional insights relevant to a broad field of research. In the current study, we present follow-up results of an experiment on artificial mummification, which began in 2009. A human leg was artificially mummified and monitored for almost a year with histological, molecular, and radiological techniques. Since then, it has remained in a dry, natron salt blend for 9 years. The current analyses show further progression of dehydration and tissue alterations, as well as DNA degradation, suggesting an ongoing process. Our results add new insights into the mechanisms of tissue mummification. Taking into account that the process is still ongoing, further research is required, including a re-evaluation of the human leg in the future.
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