lung opacity

肺混浊
  • 文章类型: Case Reports
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  • 文章类型: Case Reports
    过敏性肺炎(HP)是一种肺部疾病,其中异物被吸入并暴露于肺实质和间质组织。这种物质可能包括花粉,模具,化学品,和烟。HP导致广泛的炎症甚至慢性形式的纤维化;治疗的主要途径通常涉及需要的皮质类固醇和抗纤维化药物。我们描述了一个患者病例,其中HP在使用休闲大麻后被诊断出,在接受皮质类固醇治疗一天后,她的胸部X光片完全消退。随着娱乐性大麻使用的增加,临床医生需要保持HP对经常使用通过非法业务获得的娱乐性大麻的患者的鉴别诊断。
    Hypersensitivity pneumonitis (HP) is a lung disease in which foreign matter is inhaled and exposed to lung parenchymal and interstitial tissue. Such matter may include pollen, molds, chemicals, and smoke. HP leads to widespread inflammation and even fibrosis in chronic forms; the main route of treatment usually involves corticosteroids and antifibrotics as needed. We describe a patient case in which HP was diagnosed after using recreational marijuana, and her chest x-ray had a complete resolution after one day of a corticosteroid regimen. As recreational marijuana use increases, clinicians need to keep HP on the differential diagnosis in patients that frequently utilize recreational marijuana obtained through illicit business.
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  • 文章类型: Journal Article
    冠状病毒疫情已经蔓延到全球几乎每个国家,带来巨大的健康,金融,和情感上的破坏,以及一些国家医疗系统的崩溃。任何能够快速检测COVID-19感染的自动化COVID检测系统都可能对医疗保健服务和世界各地的人们非常有益。分子或抗原检测以及放射学X射线成像现在被用于临床诊断COVID-19。尽管如此,由于冠状病毒的激增和医院医生的压倒性工作量,开发基于AI的高精度自动COVID检测系统已成为当务之急。在X射线图像上,诊断为COVID-19,非COVID-19非COVID病毒性肺炎,和其他肺部混浊可能是具有挑战性的。这项研究利用人工智能(AI)从正常的胸部X射线图像中提供高精度的自动COVID-19检测。Further,这项研究延伸到区分COVID-19与正常,肺部混浊和非COVID病毒性肺炎图像。我们采用了三种不同的预训练模型,即Xception,VGG19和ResNet50在21,165张X射线图像的基准数据集上。最初,我们将COVID-19检测问题表述为二元分类问题,以将COVID-19从正常X射线图像中分类,获得97.5%,97.5%,Xception的准确率为93.3%,分别为VGG19和ResNet50。后来,我们专注于开发一种有效的多类分类模型,ResNet50的准确率为75%,VGG19的准确率为92%,Xception的准确率为93%。尽管Xception和VGG19的表演是相同的,Xception以其更高的精度被证明更高效,召回,f-1得分。最后,我们在我们使用的每个模型上都采用了可解释的人工智能,这增加了我们研究的可解释性。此外,我们对模型的解释进行了全面的比较,研究表明,Xception在指示负责模型预测的实际特征方面更加精确。这种可解释的AI的添加将使医疗专业人员受益匪浅,因为他们将能够可视化模型如何进行预测,并且不必盲目地信任我们开发的机器学习模型。
    The coronavirus epidemic has spread to virtually every country on the globe, inflicting enormous health, financial, and emotional devastation, as well as the collapse of healthcare systems in some countries. Any automated COVID detection system that allows for fast detection of the COVID-19 infection might be highly beneficial to the healthcare service and people around the world. Molecular or antigen testing along with radiology X-ray imaging is now utilized in clinics to diagnose COVID-19. Nonetheless, due to a spike in coronavirus and hospital doctors\' overwhelming workload, developing an AI-based auto-COVID detection system with high accuracy has become imperative. On X-ray images, the diagnosis of COVID-19, non-COVID-19 non-COVID viral pneumonia, and other lung opacity can be challenging. This research utilized artificial intelligence (AI) to deliver high-accuracy automated COVID-19 detection from normal chest X-ray images. Further, this study extended to differentiate COVID-19 from normal, lung opacity and non-COVID viral pneumonia images. We have employed three distinct pre-trained models that are Xception, VGG19, and ResNet50 on a benchmark dataset of 21,165 X-ray images. Initially, we formulated the COVID-19 detection problem as a binary classification problem to classify COVID-19 from normal X-ray images and gained 97.5%, 97.5%, and 93.3% accuracy for Xception, VGG19, and ResNet50 respectively. Later we focused on developing an efficient model for multi-class classification and gained an accuracy of 75% for ResNet50, 92% for VGG19, and finally 93% for Xception. Although Xception and VGG19\'s performances were identical, Xception proved to be more efficient with its higher precision, recall, and f-1 scores. Finally, we have employed Explainable AI on each of our utilized model which adds interpretability to our study. Furthermore, we have conducted a comprehensive comparison of the model\'s explanations and the study revealed that Xception is more precise in indicating the actual features that are responsible for a model\'s predictions.This addition of explainable AI will benefit the medical professionals greatly as they will get to visualize how a model makes its prediction and won\'t have to trust our developed machine-learning models blindly.
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  • 文章类型: Journal Article
    胸部X光片(CXR)是用于检测导致肺部混浊的呼吸系统疾病的最广泛可用的射线照相成像方式。CXR报告通常使用非标准化语言,导致主观、定性,和不可重现的不透明度估计。我们的目标是开发一个强大的深度迁移学习框架,并对其进行调整,以估计CXR的肺部不透明程度。根据排除标准选择CXR数据后,分割方案用于ROI(感兴趣区域)提取,以及分割的所有组合,数据平衡,和分类方法进行了测试,以选择表现最好的模型。使用多重交叉验证从初始选择的顶部模型中确定最佳模型,基于适当的性能指标,以及新颖的宏平均热图一致性评分(MAHCS)。将最佳模型的性能与专家医师注释者的性能进行比较,并制作了热图。最后,对目标患者人群进行了模型性能敏感性分析.所提出的框架适用于使用序数多类分类估计CXR肺不透明程度的特定用例。在2020年3月24日至2020年5月22日之间获得,使用了17,418名患者的38,365名前瞻性注释的CXR。我们测试了三种神经网络架构(ResNet-50、VGG-16和ChexNet),三种分割方案(无分割,肺分割,和基于脊柱检测的横向分割),和三种数据平衡策略(欠采样,两级采样,和合成少数过采样)使用38,079张CXR图像进行训练,并验证了286张图像作为经过放射科专家裁决的开箱即用数据集。根据这些实验的结果,对于肺部混浊分类,建议使用具有欠采样和无ROI分割的ResNet-50模型,基于MAE指标和HCS(热图一致性评分)的最优值。在性能度量方面,由该模型预测的不透明度分数相对于两组放射科医师分数(OR或原始读取器和OOBTR或开箱即用读取器)之间的一致性程度优于放射科医师间的不透明度分数一致性。
    Chest radiographs (CXRs) are the most widely available radiographic imaging modality used to detect respiratory diseases that result in lung opacities. CXR reports often use non-standardized language that result in subjective, qualitative, and non-reproducible opacity estimates. Our goal was to develop a robust deep transfer learning framework and adapt it to estimate the degree of lung opacity from CXRs. Following CXR data selection based on exclusion criteria, segmentation schemes were used for ROI (Region Of Interest) extraction, and all combinations of segmentation, data balancing, and classification methods were tested to pick the top performing models. Multifold cross validation was used to determine the best model from the initial selected top models, based on appropriate performance metrics, as well as a novel Macro-Averaged Heatmap Concordance Score (MA HCS). Performance of the best model is compared against that of expert physician annotators, and heatmaps were produced. Finally, model performance sensitivity analysis across patient populations of interest was performed. The proposed framework was adapted to the specific use case of estimation of degree of CXR lung opacity using ordinal multiclass classification. Acquired between March 24, 2020, and May 22, 2020, 38,365 prospectively annotated CXRs from 17,418 patients were used. We tested three neural network architectures (ResNet-50, VGG-16, and ChexNet), three segmentation schemes (no segmentation, lung segmentation, and lateral segmentation based on spine detection), and three data balancing strategies (undersampling, double-stage sampling, and synthetic minority oversampling) using 38,079 CXR images for training, and validation with 286 images as the out-of-the-box dataset that underwent expert radiologist adjudication. Based on the results of these experiments, the ResNet-50 model with undersampling and no ROI segmentation is recommended for lung opacity classification, based on optimal values for the MAE metric and HCS (Heatmap Concordance Score). The degree of agreement between the opacity scores predicted by this model with respect to the two sets of radiologist scores (OR or Original Reader and OOBTR or Out Of Box Reader) in terms of performance metrics is superior to the inter-radiologist opacity score agreement.
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  • 文章类型: Case Reports
    尘肺是在环境中暴露于有机和无机粉尘的工人中发现的一种职业病,就像在采矿中一样,喷砂,陶器,砌石,和农业。肺部对可吸入粉尘的炎症反应导致斑疹的形成,结节,和纤维化,吸入粉尘中二氧化硅含量较高与纤维化增加有关。混合粉尘尘肺(MDP)的特征是暴露于含有10-20%二氧化硅的粉尘中,肺部成像显示不规则混浊。组织病理学在MDP的诊断中起着至关重要的作用。虽然结果很好,它在多年的持续暴露中缓慢发展,其特征是呼吸困难和咳嗽逐渐恶化为肺心病。唯一有效的治疗方法是消除暴露,这使得早期识别疾病对于有利的结果至关重要。我们介绍了一名南美农民患有哮喘的混合性尘肺病例。他在影像学和肺心病上表现为呼吸困难恶化和双肺多发结节。进行了广泛的检查,排除了任何恶性肿瘤和肺结核.分析电视胸腔镜手术(VATS)活检标本证实诊断为混合性尘肺。他在肺的上叶有不规则的结节汇合,最大为2.1厘米。这符合国际劳工组织(ILO)对进行性大规模纤维化的定义。这个,随着肺心病出现在他身上,即使在他远离灰尘暴露后,也会给它一个不好的预后。他接受了类固醇,导致症状改善,他已经出院去追踪肺科医生.
    Pneumoconiosis is an occupational disease found in workers with environmental exposure to organic and inorganic dust, as in mining, sandblasting, pottery, stone masonry, and farming. The inflammatory response of the lung to respirable dust causes the formation of macules, nodules, and fibrosis, and higher silica content in inhaled dust is associated with increased fibrosis. Mixed dust pneumoconiosis (MDP) is characterized by exposure to dust containing 10-20% silica, and its lung imaging show irregular opacities. Histopathology plays a vital role in the diagnosis of MDP. Though it has a favorable outcome, it evolves slowly over many years of constant exposure and is characterized by worsening dyspnea and cough gradually progressing to cor pulmonale. The only effective treatment is removing exposure, which makes it essential to recognize the disease early for a favorable outcome. We present a case of mixed dust pneumoconiosis in a farmer from South America who had asthma. He presented with worsening dyspnea and multiple nodules in both lungs on imaging and cor pulmonale. An extensive workup was done, and it ruled out any malignancy and tuberculosis. Analysis of video-assisted thoracoscopic surgery (VATS) biopsy samples confirmed the diagnosis of mixed dust pneumoconiosis. He had a confluence of irregular nodes in the upper lobes of the lungs, and the largest was 2.1 cm. This fits the International Labour Organization (ILO) definition of progressive massive fibrosis. This, along with cor pulmonale present in him, gives it a poor prognosis even after he is removed from dust exposure. He received steroids, which led to symptomatic improvement, and he was discharged to follow up with the pulmonologist.
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  • 文章类型: Journal Article
    在过去的几十年里,已经引入了几种流行病。在某些情况下,医生和医生在正确识别这些疾病方面面临困难。如果正确训练,机器可以比人更准确地执行其中一些识别任务。随着时间的推移,医疗数据的数量正在增加。机器可以分析这些医疗数据,并从这些数据中提取知识,这可以帮助医生和医生。这项研究提出了一种名为ChestX-ray6的轻量级卷积神经网络(CNN),可以自动检测肺炎,COVID19心脏肿大,肺混浊,从数字胸部X线图像和胸膜。这里已经组合了多个数据库,包含9,514张正常和其他五种疾病的胸部X射线图像。轻巧的ChestX-ray6模型对六种疾病的检测精度达到了80%。ChestX-ray6模型已被保存并用于正常和肺炎患者的二元分类,以揭示模型的泛化能力。预训练的ChestX-ray6模型对二元分类的准确率和召回率分别达到97.94%和98%,超过了最先进的(SOTA)模型。
    In the last few decades, several epidemic diseases have been introduced. In some cases, doctors and medical physicians are facing difficulties in identifying these diseases correctly. A machine can perform some of these identification tasks more accurately than a human if it is trained correctly. With time, the number of medical data is increasing. A machine can analyze this medical data and extract knowledge from this data, which can help doctors and medical physicians. This study proposed a lightweight convolutional neural network (CNN) named ChestX-ray6 that automatically detects pneumonia, COVID19, cardiomegaly, lung opacity, and pleural from digital chest x-ray images. Here multiple databases have been combined, containing 9,514 chest x-ray images of normal and other five diseases. The lightweight ChestX-ray6 model achieved an accuracy of 80% for the detection of six diseases. The ChestX-ray6 model has been saved and used for binary classification of normal and pneumonia patients to reveal the model\'s generalization power. The pre-trained ChestX-ray6 model has achieved an accuracy and recall of 97.94% and 98% for binary classification, which outweighs the state-of-the-art (SOTA) models.
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  • 文章类型: Journal Article
    新发现的冠状病毒肺炎,随后被称为COVID-19,具有高度传染性和致病性,没有临床批准的抗病毒药物或疫苗可用于治疗。COVID-19最常见的症状是干咳,喉咙痛,和发烧。症状可以发展为严重的肺炎,并伴有严重的并发症,包括感染性休克,肺水肿,急性呼吸窘迫综合征和多器官衰竭。虽然加拿大目前不建议对COVID-19进行初步诊断,但计算机辅助诊断系统可以帮助早期发现COVID-19异常,并有助于监测疾病的进展,有可能降低死亡率。在这项研究中,我们比较了流行的基于深度学习的特征提取框架,用于自动COVID-19分类。为了获得最准确的特征,这是学习的重要组成部分,MobileNet,DenseNet,Xception,ResNet,InceptionV3,InceptionResNetV2,VGGNet,NASNet是在深度卷积神经网络池中选择的。然后将提取的特征输入到几个机器学习分类器中,以将受试者分类为COVID-19病例或对照。这种方法避免了特定于任务的数据预处理方法,以支持对看不见的数据的更好的泛化能力。在公开的COVID-19胸部X射线和CT图像数据集上验证了该方法的性能。带有Bagging树分类器的DenseNet121特征提取器实现了最佳性能,分类准确率为99%。第二好的学习者是由LightGBM训练的ResNet50特征提取器的混合体,准确率为98。
    The newly identified Coronavirus pneumonia, subsequently termed COVID-19, is highly transmittable and pathogenic with no clinically approved antiviral drug or vaccine available for treatment. The most common symptoms of COVID-19 are dry cough, sore throat, and fever. Symptoms can progress to a severe form of pneumonia with critical complications, including septic shock, pulmonary edema, acute respiratory distress syndrome and multi-organ failure. While medical imaging is not currently recommended in Canada for primary diagnosis of COVID-19, computer-aided diagnosis systems could assist in the early detection of COVID-19 abnormalities and help to monitor the progression of the disease, potentially reduce mortality rates. In this study, we compare popular deep learning-based feature extraction frameworks for automatic COVID-19 classification. To obtain the most accurate feature, which is an essential component of learning, MobileNet, DenseNet, Xception, ResNet, InceptionV3, InceptionResNetV2, VGGNet, NASNet were chosen amongst a pool of deep convolutional neural networks. The extracted features were then fed into several machine learning classifiers to classify subjects as either a case of COVID-19 or a control. This approach avoided task-specific data pre-processing methods to support a better generalization ability for unseen data. The performance of the proposed method was validated on a publicly available COVID-19 dataset of chest X-ray and CT images. The DenseNet121 feature extractor with Bagging tree classifier achieved the best performance with 99% classification accuracy. The second-best learner was a hybrid of the a ResNet50 feature extractor trained by LightGBM with an accuracy of 98.
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