laboratory surveillance

实验室监测
  • 文章类型: Journal Article
    背景:基因治疗旨在为B型血友病患者提供稳定且升高的因子IX活性,从而加强保护,减轻频繁输注替代治疗的负担。欧洲药品管理局已批准使用因子IX帕多瓦变体(ectranacogenedezaparvovec)的重度和中度重度B型血友病的基因疗法。目的是提供专门用于血友病B基因治疗的文件,并对该主题进行全面概述。
    方法:一个意大利血友病专家小组对文献进行了叙述性回顾,并在虚拟会议上讨论了在意大利实施这种治疗的几个关键方面。讨论涵盖了组织模式,多学科团队的作用,实验室监测和患者旅程,从后续行动到识别安全问题和结果措施。
    结果:本文强调了遵循“中心与分支”组织模式的必要性,并阐明了多学科团队中每个专业人员的角色,以支持患者参与。管理,和保留。此外,本文强调需要进行实验室检查以进行患者筛查和随访,并提出了一份检查表以帮助患者识别。最后,考虑了意大利血友病中心的需求,以确保有效实施护理模式.
    结论:确保中心组织得当至关重要,配备和培训以充分选择患者,提供基因治疗并进行随访。
    BACKGROUND: Gene therapy is designed to provide people with haemophilia B with a steady and elevated factor IX activity, thereby strengthening protection and relieving the burden of replacement therapy frequent infusions. The European Medicines Agency has approved a gene therapy for the severe and moderately severe forms of haemophilia B that uses the factor IX Padua variant (etranacogene dezaparvovec). The aim is to provide a document dedicated to haemophilia B gene therapy and give a comprehensive overview of the topic.
    METHODS: An Italian group of experts in haemophilia has carried out a narrative review of the literature and has discussed during a virtual meeting several key aspects of the delivery of this treatment in Italy. The discussion covered the organisational model, the role of the multidisciplinary team, the laboratory surveillance and the patient journey, from the follow-up to the identification of safety issues and outcome measures.
    RESULTS: This article highlights the need to follow the Hub and Spoke organisational model and sheds light on the role of each professional figure within the multidisciplinary teams to favour patient engagement, management, and retention. Moreover, this article stresses the need to perform laboratory tests for patient screening and follow-up and proposes a checklist to help patient identification. Finally, the needs of Italian haemophilia centres have been considered to ensure an efficient implementation of the care delivery model.
    CONCLUSIONS: It is crucial to ensure that centres are appropriately organized, equipped and trained to adequately select patients, deliver the gene therapy and perform follow-up.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    背景COVID-19的流行和耳念珠菌的出现改变了全球念珠菌血症的流行病学格局。我们比较了希腊三级学术医院在COVID-19之前(2009-2018年)和早期(2020-2021年)和晚期COVID-19/大流行后早期(2022-2023年)期间的念珠菌血症的流行病学趋势。方法发生率,物种分布,记录抗真菌药敏谱和抗真菌消耗量,并进行单向方差分析或Fisher精确检验。通过MALDI-ToFMS鉴定物种,并使用CLSIM27-Ed4确定了对C.auris和EUCAST-E的体外敏感性。其他念珠菌属的DEF7.3.2。结果总的来说,在COVID-19大流行期间记录了370起念珠菌血症。感染发生率(2.0次/前10,000张病床,在COVID-19早期为3.9,在COVID-19晚期为5.1,p<0.0001),C.极光(0%,9%和33%,p<0.0001)和氟康唑抗性近平滑梭菌物种复合物(SC)(20%,24%和33%,p=0.06)感染随着时间的推移而增加,后者与氟康唑/伏立康唑消费量的增加无关。随着时间的推移,在氟康唑耐药分离株中观察到显著增加,无论物种如何(8%,17%和41%,p<0.0001)。未记录对两性霉素B或棘白菌素的耐药性,除了单一的泛棘白菌素抗性C.auris菌株。结论在COVID-19时代,念珠菌血症的发病率几乎增加了两倍,与主要病原体之一的C.auris和增加的氟康唑耐药性。几乎一半的念珠菌分离株对氟康唑耐药,强调需要提高认识和严格执行感染控制措施。
    BackgroundThe COVID-19 pandemic and the emergence of Candida auris have changed the epidemiological landscape of candidaemia worldwide.AimWe compared the epidemiological trends of candidaemia in a Greek tertiary academic hospital before (2009-2018) and during the early COVID-19 (2020-2021) and late COVID-19/early post-pandemic (2022-2023) era.MethodsIncidence rates, species distribution, antifungal susceptibility profile and antifungal consumption were recorded, and one-way ANOVA or Fisher\'s exact test performed. Species were identified by MALDI-ToF MS, and in vitro susceptibility determined with CLSI M27-Ed4 for C. auris and the EUCAST-E.DEF 7.3.2 for other Candida spp.ResultsIn total, 370 candidaemia episodes were recorded during the COVID-19 pandemic. Infection incidence (2.0 episodes/10,000 hospital bed days before, 3.9 during the early and 5.1 during the late COVID-19 era, p < 0.0001), C. auris (0%, 9% and 33%, p < 0.0001) and fluconazole-resistant C. parapsilosis species complex (SC) (20%, 24% and 33%, p = 0.06) infections increased over time, with the latter not associated with increase in fluconazole/voriconazole consumption. A significant increase over time was observed in fluconazole-resistant isolates regardless of species (8%, 17% and 41%, p < 0.0001). Resistance to amphotericin B or echinocandins was not recorded, with the exception of a single pan-echinocandin-resistant C. auris strain.ConclusionCandidaemia incidence nearly tripled during the COVID-19 era, with C. auris among the major causative agents and increasing fluconazole resistance in C. parapsilosis SC. Almost half of Candida isolates were fluconazole-resistant, underscoring the need for increased awareness and strict implementation of infection control measures.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    从2023年4月到2024年5月,法国发生了细小病毒B19(B19V)感染的异常流行。2019年B19VIgM阳性血清学数量比上次疫情高4倍。来自急诊网络的临床数据证实了这一观察结果。通过所有数据源观察到儿童的发病率和死亡率后果。在成年人中,仅在实验室确认的数据中观察到增加.医生和决策者应该被告知,以便更好地预防,诊断和管理高危患者。
    From April 2023 to May 2024, an unusual epidemic of parvovirus B19 (B19V) infections occurred in France. The number of B19V IgM-positive serologies was four times higher than in the previous epidemic in 2019. Clinical data from emergency networks corroborated this observation. Morbidity and mortality consequences were observed in children through all data sources. In adults, the increase was only observed in laboratory-confirmed data. Physicians and decisionmakers should be informed in order to better prevent, diagnose and manage at-risk patients.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    乌干达脊髓灰质炎的控制可追溯到1950年,此后,急性弛缓性麻痹(AFP)监测已被用作识别野生脊髓灰质炎病毒的标准。脊髓灰质炎病毒分离最初是通过合作研究进行的,1993年,作为全球脊髓灰质炎病毒实验室网络(GPLN)的成员,建立了扩大免疫实验室计划(EPI-LAB),并在乌干达病毒研究所率先开展了这项活动。
    本报告的目的是记录EPI-LAB在乌干达根除脊髓灰质炎病毒方面的进展和影响。
    脊髓灰质炎病毒的检测和鉴定是通过基于实时逆转录酶聚合酶链反应(rRTPCR)的脊髓灰质炎病毒的组织培养和类型内分化来实现的。将获得的数据输入国家AFP数据库并使用EpiInfoTM统计软件进行分析。
    野生和沙宾脊髓灰质炎病毒的定量和定性检测与脊髓灰质炎运动相对应。在整个研究期间,基本上实现了WHO用于AFP监测的目标指标。
    病毒学跟踪与获得标准的AFP监测指标相结合对于实现和维持全国无野生脊髓灰质炎状态至关重要。实验室监测仍然是为根除脊髓灰质炎认证过程提供信息的关键。
    UNASSIGNED: The control of poliomyelitis in Uganda dates back as far as 1950 and acute flaccid paralysis (AFP) surveillance has since been used as a criterion for identifying wild polioviruses. Poliovirus isolation was initially pursued through collaborative research however, in 1993, the Expanded Program on Immunization Laboratory (EPI-LAB) was established as a member of the Global Poliovirus Laboratory Network (GPLN) and spearheaded this activity at Uganda Virus Research Institute.
    UNASSIGNED: The aim of this report is to document the progress and impact of the EPI-LAB on poliovirus eradication in Uganda.
    UNASSIGNED: Poliovirus detection and identification were achieved fundamentally through tissue culture and intra-typic differentiation of the poliovirus based on the real-time reverse transcriptase polymerase chain reaction (rRT PCR). The data obtained was entered into the national AFP database and analysed using EpiInfoTM statistical software.
    UNASSIGNED: Quantitative and qualitative detection of wild and Sabin polioviruses corresponded with the polio campaigns. The WHO target indicators for AFP surveillance were achieved essentially throughout the study period.
    UNASSIGNED: Virological tracking coupled with attaining standard AFP surveillance indicators has been pivotal in achieving and maintaining the national wild polio-free status. Laboratory surveillance remains key in informing the certification process of polio eradication.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    腮腺炎是由腮腺炎病毒(MuV)引起的疫苗可预防的疾病。然而,MuV在许多疫苗覆盖率高的国家重新出现。世界卫生组织(WHO)建议基于小疏水性(SH)基因的测序进行分子监测。此外,在不同的研究中描述了SH和非编码区(NCR)的组合使用,证明是在国家和国际层面上区分一般流通模式的有用补充标记。这项工作的目的是测试SH和MF-NCR测序组合在追踪西班牙上一次流行病浪潮(2015-2020年)期间隐藏的传播簇和链方面的地方水平有用性。通过整合微生物和流行病学数据,建立了马德里自治区903例病例的数据库。其中,对453例代表性病例进行基因分型。检测到8种不同的SH变体和34种SH单倍型。当地的MuV循环显示出与先前在国家一级描述的相同的时间模式。先前确定的13次暴发中只有两次是由一种以上的变体/单倍型引起的。SH变体的地理表示允许识别几个以前未检测到的簇,通过SH和MF-NCR的组合进行了系统发育分析,共90例。MF-NCR无法改善基于SH测序的地理簇的辨别,显示疫情调查的分辨率有限。
    Mumps is a vaccine-preventable disease caused by the mumps virus (MuV). However, MuV has re-emerged in many countries with high vaccine coverage. The World Health Organization (WHO) recommends molecular surveillance based on sequencing of the small hydrophobic (SH) gene. Additionally, the combined use of SH and non-coding regions (NCR) has been described in different studies, proving to be a useful complement marker to discriminate general patterns of circulation at national and international levels. The aim of this work is to test local-level usefulness of the combination of SH and MF-NCR sequencing in tracing hidden transmission clusters and chains during the last epidemic wave (2015-2020) in Spain. A database with 903 cases from the Autonomous Community of Madrid was generated by the integration of microbiological and epidemiological data. Of these, 453 representative cases were genotyped. Eight different SH variants and thirty-four SH haplotypes were detected. Local MuV circulation showed the same temporal pattern previously described at a national level. Only two of the thirteen previously identified outbreaks were caused by more than one variant/haplotype. Geographical representation of SH variants allowed the identification of several previously undetected clusters, which were analysed phylogenetically by the combination of SH and MF-NCR, in a total of 90 cases. MF-NCR was not able to improve the discrimination of geographical clusters based on SH sequencing, showing limited resolution for outbreak investigations.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Case Reports
    我们报告了两种广泛耐药的(XDR)淋病奈瑟菌(NG)分离株,它们结合了对阿奇霉素的高度耐药性和对头孢曲松的耐药性,在法国从两名异性恋患者那里获得,其中一人从柬埔寨回来。全基因组测序鉴定了MLSTST16406,即马赛克penA-60.001,在国际传播的FC428克隆中引起头孢曲松抗性,和23SrRNA基因中的A2059G突变。NG分离株F93和F94与2022年在奥地利和英国检测到的XDR分离株相关。
    We report two extensively drug-resistant (XDR) Neisseria gonorrhoeae (NG) isolates combining high-level resistance to azithromycin and resistance to ceftriaxone, obtained in France from two heterosexual patients, one of whom returned from Cambodia. Whole genome sequencing identified MLST ST16406, the mosaic penA-60.001 which caused ceftriaxone resistance in the internationally spreading FC428 clone, and the A2059G mutation in the 23S rRNA gene. The NG isolates F93 and F94 were related to XDR isolates detected in Austria and the United Kingdom in 2022.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    腮腺炎是一种主要以腮腺炎症为特征的病毒感染。尽管有疫苗接种计划,报告了完全接种疫苗人群中的感染情况.世界卫生组织(WHO)建议基于小疏水性(SH)基因的测序对腮腺炎进行分子监测。在多项研究中提出了使用高变非编码区(NCR)作为其他分子标记。文献中描述了不同欧洲国家的腮腺炎病毒(MuV)基因型和变体的流行。从2010年到2020年,描述了由基因型G引起的腮腺炎暴发。然而,这个问题还没有从更广泛的地理角度进行分析。在本研究中,分析了在5年内(2015年至2020年3月)在西班牙和荷兰检测到的MuV的序列数据,以在比以前的本地研究更大的地理范围内获得对MuV时空传播的见解。
    本研究包括来自两个国家的基质和融合蛋白基因(MF-NCR)序列之间的总共1,121SH和262NCR。SH的分析揭示了106种不同的单倍型(一组相同的序列)。
    其中,七个显示广泛的循环被认为是变体。这七个国家都是在同时的时间段内检测到的。在156个序列中检测到单个MF-NCR单倍型(占总数的59.3%),并由七个SH变体中的五个共享,以及三种次要的MF-NCR单倍型。在西班牙首先检测到两国共有的所有SH变体和MF-NCR单倍型。
    我们的结果表明了从南欧到北欧的传播途径。尽管两个国家的免疫接种覆盖率相似,但西班牙的腮腺炎发病率较高。可能与更高的MuV出口风险有关。总之,本研究为MuV变异体和单倍型在单一国家边界以外的传播提供了新的见解.事实上,MF-NCR分子工具的使用允许揭示荷兰和西班牙之间的MuV传输流。需要进行包括其他(欧洲)国家在内的类似研究,以提供本研究中提供的数据的更广泛视图。
    UNASSIGNED: Mumps is a viral infection mainly characterized by inflammation of the parotid glands. Despite of vaccination programs, infections among fully vaccinated populations were reported. The World Health Organization (WHO) recommends molecular surveillance of mumps based on sequencing of the small hydrophobic (SH) gene. The use of hypervariable non-coding regions (NCR) as additional molecular markers was proposed in multiple studies. Circulation of mumps virus (MuV) genotypes and variants in different European countries were described in the literature. From 2010 to 2020, mumps outbreaks caused by genotype G were described. However, this issue has not been analyzed from a wider geographical perspective. In the present study, sequence data from MuV detected in Spain and in The Netherlands during a period of 5  years (2015- March 2020) were analyzed to gain insights in the spatiotemporal spread of MuV at a larger geographical scale than in previous local studies.
    UNASSIGNED: A total of 1,121 SH and 262 NCR between the Matrix and Fusion protein genes (MF-NCR) sequences from both countries were included in this study. Analysis of SH revealed 106 different haplotypes (set of identical sequences).
    UNASSIGNED: Of them, seven showing extensive circulation were considered variants. All seven were detected in both countries in coincident temporal periods. A single MF-NCR haplotype was detected in 156 sequences (59.3% of total), and was shared by five of the seven SH variants, as well as three minor MF-NCR haplotypes. All SH variants and MF-NCR haplotypes shared by both countries were detected first in Spain.
    UNASSIGNED: Our results suggest a transmission way from south to north Europe. The higher incidence rate of mumps in Spain in spite of similar immunization coverage in both countries, could be associated with higher risk of MuV exportation. In conclusion, the present study provided novel insights into the circulation of MuV variants and haplotypes beyond the borders of single countries. In fact, the use of MF-NCR molecular tool allowed to reveal MuV transmission flows between The Netherlands and Spain. Similar studies including other (European) countries are needed to provide a broader view of the data presented in this study.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    背景:白喉是一种严重的呼吸道或皮肤传染病,由产生外毒素的白喉棒状杆菌引起,溃疡和假结核。由于免疫计划的崩溃,白喉再次盛行,社会混乱和动荡。
    目的:本研究描述了2000-2021年间荷兰通报的白喉病例,以及送往国家公共卫生与环境研究所(RIVM)的分离株。
    方法:进行了档案调查,包括所有被告知的白喉梭菌病例和分离株,使用毒素-PCR和Elek测试测试毒素产生的溃疡梭菌和假结核梭菌。进行了探索性审查,以了解高接种疫苗的人群中的传播。
    结果:在2000年至2021年之间,有18例白喉疾病通知确认为产毒白喉梭菌(n=9)或溃疡(n=9)。17例(94.4%)出现皮肤感染。所有怀疑来自国外的病例(n=8)都与白喉梭菌感染有关。相比之下,在荷兰感染的9/10病例是由溃疡梭菌引起的,人畜共患病。没有报告二次传播。送到RIVM的C.ulcerans分离株产生的白喉毒素(11/31;35%)比白喉C.(7/89;7.9%)更频繁。
    结论:在荷兰,白喉梭菌的人与人传播和溃疡梭菌的动物与人传播都很少发生。病例主要表现为皮肤感染。与旅行有关的病例仍有向疫苗接种率低的人群传播的风险,强调免疫和白喉控制措施的重要性。
    BACKGROUND: Diphtheria is a severe respiratory or cutaneous infectious disease, caused by exotoxin producing Corynebacterium diphtheriae, C. ulcerans and C. pseudotuberculosis. Diphtheria is once again prevalent due to breakdown of immunisation programmes, social disruption and unrest.
    OBJECTIVE: This study describes the notified diphtheria cases in the Netherlands between 2000-2021 and isolates that were sent to the National Institute for Public Health and the Environment (RIVM).
    METHODS: File investigation was performed including all notified cases and isolates of C. diphtheriae, C. ulcerans and C. pseudotuberculosis that were tested for toxin production using a toxin-PCR and Elek test. An exploratory review was performed to understand transmission in populations with a high vaccination uptake.
    RESULTS: Eighteen diphtheria notifications were made with confirmed toxigenic C. diphtheriae (n = 9) or ulcerans (n = 9) between 2000 and 2021. Seventeen (94.4%) presented with a cutaneous infection. All cases with a suspected source abroad (n = 8) concerned infection with C. diphtheriae. In contrast, 9/10 cases infected in the Netherlands were caused by C. ulcerans, a zoonosis. Secondary transmission was not reported. Isolates of C. ulcerans sent to the RIVM produced more often the diphtheria exotoxin (11/31; 35%) than C. diphtheriae (7/89; 7.9%).
    CONCLUSIONS: Both human-to-human transmission of C. diphtheriae and animal-to-human transmission of C. ulcerans rarely occurs in the Netherlands. Cases mainly present with a cutaneous infection. Travel-related cases remain a risk for transmission to populations with low vaccination coverage, highlighting the importance of immunization and diphtheria control measures.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    进行性多灶性白质脑病(PML)是由JC病毒(JCV)引起的破坏性脱髓鞘疾病,主要影响细胞免疫受损的患者。PML是一种不可报告的疾病,除了少数例外,让国家监控变得困难。在日本,美国国立传染病研究所对脑脊液(CSF)中的JCV进行聚合酶链反应(PCR)检测,以支持PML诊断.为了澄清日本PML的整体概况,我们对10年(2011-2020财年)CSF-JCV检测时提供的患者数据进行了分析.对1537例新的怀疑PML病例进行了PCR检测,和288(18.7%)患者的CSF-JCV检测呈阳性。对所有测试个体的临床信息的分析揭示了PML病例的特征,包括地理分布,年龄和性别模式,和CSF-JCV-阳性率在研究受试者中对于每种类型的基础条件。在研究期间的最后五年,利用超灵敏PCR检测的监测系统和对PML的广泛临床关注导致在疾病早期阶段检测到CSF-JCV.这项研究的结果将不仅为PML的诊断提供有价值的信息,也用于治疗PML易感病症。
    Progressive multifocal leukoencephalopathy (PML) is a devastating demyelinating disease caused by JC virus (JCV), predominantly affecting patients with impaired cellular immunity. PML is a non-reportable disease with a few exceptions, making national surveillance difficult. In Japan, polymerase chain reaction (PCR) testing for JCV in the cerebrospinal fluid (CSF) is performed at the National Institute of Infectious Diseases to support PML diagnosis. To clarify the overall profile of PML in Japan, patient data provided at the time of CSF-JCV testing over 10 years (FY2011-2020) were analyzed. PCR testing for 1537 new suspected PML cases was conducted, and 288 (18.7%) patients tested positive for CSF-JCV. An analysis of the clinical information on all individuals tested revealed characteristics of PML cases, including the geographic distribution, age and sex patterns, and CSF-JCV-positivity rates among the study subjects for each type of underlying condition. During the last five years of the study period, a surveillance system utilizing ultrasensitive PCR testing and widespread clinical attention to PML led to the detection of CSF-JCV in the earlier stages of the disease. The results of this study will provide valuable information not only for PML diagnosis, but also for the treatment of PML-predisposing conditions.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    伤寒沙门氏菌病是发生在发展中的流行地区的全球性公共卫生问题。在巴西,病例大多在北部和东北地区登记。菌株的分子表征对于了解疾病感染的流行病学和设计控制策略很重要。本研究回顾性评估了巴西北部地区散发性和与爆发相关的伤寒沙门氏菌分离株的基因分型特征。从Acre和Pará州的患者的血液和直肠拭子中回收了细菌分离物,巴西北部地区,在1995年至2013年期间,通过应用多位点序列分型(MLST)和脉冲场凝胶电泳(PFGE)参考方法进行了基因分型。MLST基因分型揭示了流行克隆ST1和ST2的存在,PFGE鉴定了20个脉冲型,包括四个不同的簇(A-D),和六个亚簇(A1-D1),在不同的时期和位置具有不可区分的菌株。最后,获得的数据证明了时间稳定性,适应,随着时间的推移,与爆发相关的和零星的伤寒沙门氏菌的传播,有助于该地区的传输链。
    Typhoidal salmonellosis is a global public health problem occurring in developing endemic regions. In Brazil, cases are mostly registered in the North and Northeast regions. Molecular characterization of the strains is important to understand the epidemiology of disease infections and to design control strategies. The present study retrospectively evaluates the genotyping features of sporadic and outbreak-related Salmonella Typhi isolates from the Brazilian North region. Bacterial isolates were recovered from blood and a rectal swab of patients in the states of Acre and Pará, Brazilian North region, in the period of 1995 to 2013, and were submitted to genotyping by applying Multilocus sequence typing (MLST) and Pulsed Field Gel Electrophoresis (PFGE) reference methods. MLST genotyping revealed the presence of epidemic clones ST1 and ST2, and 20 pulsotypes were identified by PFGE, including four distinct clusters (A-D), and six subclusters (A1-D1) with indistinguishable strains in different periods and locations. To conclude, the obtained data demonstrates the temporal stability, adaptation, and transmission of outbreak-related and sporadic S. Typhi strains over time, contributing to the transmission chain in the region.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

公众号