OBJECTIVE: Muscle radiodensity loss after surgery and adjuvant chemotherapy is associated with poor outcomes in ovarian cancer. Assessing muscle radiodensity is a real-world clinical challenge owing to the requirement for computed tomography (CT) with consistent protocols and labor-intensive processes. This study aimed to use interpretable machine learning (ML) to predict muscle radiodensity loss.
METHODS: This study included 723 patients with ovarian cancer who underwent primary debulking surgery and platinum-based chemotherapy between 2010 and 2019 at two tertiary centers (579 in cohort 1 and 144 in cohort 2). Muscle radiodensity was assessed from pre- and post-treatment CT acquired with consistent protocols, and a decrease in radiodensity ≥ 5% was defined as loss. Six ML models were trained, and their performances were evaluated using the area under the curve (AUC) and F1-score. The SHapley Additive exPlanations (SHAP) method was applied to interpret the ML models.
RESULTS: The CatBoost model achieved the highest AUC of 0.871 (95% confidence interval, 0.870-0.874) and F1-score of 0.688 (95% confidence interval, 0.685-0.691) among the models in the training set and outperformed in the external validation set, with an AUC of 0.839 and F1-score of 0.673. Albumin change, ascites, and residual disease were the most important features associated with a higher likelihood of muscle radiodensity loss. The SHAP force plot provided an individualized interpretation of model predictions.
CONCLUSIONS: An interpretable ML model can assist clinicians in identifying ovarian cancer patients at risk of muscle radiodensity loss after treatment and understanding the contributors of muscle radiodensity loss.

BACKGROUND: Machine learning techniques have been shown to be efficient in identifying health misinformation, but the results may not be trusted unless they can be justified in a way that is understandable.
OBJECTIVE: This study aimed to provide a new criteria-based system to assess and justify health news quality. Using a subset of an existing set of criteria, this study compared the feasibility of 2 alternative methods for adding interpretability. Both methods used classification and highlighting to visualize sentence-level evidence.
METHODS: A total of 3 out of 10 well-established criteria were chosen for experimentation, namely whether the health news discussed the costs of the intervention (the cost criterion), explained or quantified the harms of the intervention (the harm criterion), and identified the conflicts of interest (the conflict criterion). The first step of the experiment was to automate the evaluation of the 3 criteria by developing a sentence-level classifier. We tested Logistic Regression, Naive Bayes, Support Vector Machine, and Random Forest algorithms. Next, we compared the 2 visualization approaches. For the first approach, we calculated word feature weights, which explained how classification models distill keywords that contribute to the prediction; then, using the local interpretable model-agnostic explanation framework, we selected keywords associated with the classified criterion at the document level; and finally, the system selected and highlighted sentences with keywords. For the second approach, we extracted sentences that provided evidence to support the evaluation result from 100 health news articles; based on these results, we trained a typology classification model at the sentence level; and then, the system highlighted a positive sentence instance for the result justification. The number of sentences to highlight was determined by a preset threshold empirically determined using the average accuracy.
RESULTS: The automatic evaluation of health news on the cost, harm, and conflict criteria achieved average area under the curve scores of 0.88, 0.76, and 0.73, respectively, after 50 repetitions of 10-fold cross-validation. We found that both approaches could successfully visualize the interpretation of the system but that the performance of the 2 approaches varied by criterion and highlighting the accuracy decreased as the number of highlighted sentences increased. When the threshold accuracy was ≥75%, this resulted in a visualization with a variable length ranging from 1 to 6 sentences.
CONCLUSIONS: We provided 2 approaches to interpret criteria-based health news evaluation models tested on 3 criteria. This method incorporated rule-based and statistical machine learning approaches. The results suggested that one might visually interpret an automatic criterion-based health news quality evaluation successfully using either approach; however, larger differences may arise when multiple quality-related criteria are considered. This study can increase public trust in computerized health information evaluation.

The growing integration of Internet of Things (IoT) technology within the healthcare sector has revolutionized healthcare delivery, enabling advanced personalized care and precise treatments. However, this raises significant challenges, demanding robust, intelligible, and effective monitoring mechanisms. We propose an interpretable machine-learning approach to the trustworthy and effective detection of behavioral anomalies within the realm of medical IoT. The discovered anomalies serve as indicators of potential system failures and security threats. Essentially, the detection of anomalies is accomplished by learning a classifier from the operational data generated by smart devices. The learning problem is dealt with in predictive association modeling, whose expressiveness and intelligibility enforce trustworthiness to offer a comprehensive, fully interpretable, and effective monitoring solution for the medical IoT ecosystem. Preliminary results show the effectiveness of our approach.

Imaging flow cytometry (IFC) allows rapid acquisition of numerous single-cell images per second, capturing information from multiple fluorescent channels. However, the traditional process of staining cells with fluorescently labeled conjugated antibodies for IFC analysis is time consuming, expensive, and potentially harmful to cell viability. To streamline experimental workflows and reduce costs, it is crucial to identify the most relevant channels for downstream analysis. In this study, we introduce PXPermute, a user-friendly and powerful method for assessing the significance of IFC channels, particularly for cell profiling. Our approach evaluates channel importance by permuting pixel values within each channel and analyzing the resulting impact on machine learning or deep learning models. Through rigorous evaluation of three multichannel IFC image datasets, we demonstrate PXPermute\'s potential in accurately identifying the most informative channels, aligning with established biological knowledge. PXPermute can assist biologists with systematic channel analysis, experimental design optimization, and biomarker identification.

UNASSIGNED: Current stress detection methods concentrate on identification of stress and non-stress states despite the existence of various stress types. The present study performs a more specific, explainable stress classification, which could provide valuable information on the physiological stress reactions.
UNASSIGNED: Physiological responses were measured in the Maastricht Acute Stress Test (MAST), comprising alternating trials of cold pressor (inducing physiological stress and pain) and mental arithmetics (eliciting cognitive and social-evaluative stress). The responses in these subtasks were compared to each other and to the baseline through mixed model analysis. Subsequently, stress type detection was conducted with a comprehensive analysis of several machine learning components affecting classification. Finally, explainable artificial intelligence (XAI) methods were applied to analyze the influence of physiological features on model behavior.
UNASSIGNED: Most of the investigated physiological reactions were specific to the stressors, and the subtasks could be distinguished from baseline with up to 86.5% balanced accuracy. The choice of the physiological signals to measure (up to 25%-point difference in balanced accuracy) and the selection of features (up to 7%-point difference) were the two key components in classification. Reflection of the XAI analysis to mixed model results and human physiology revealed that the stress detection model concentrated on physiological features relevant for the two stressors.
UNASSIGNED: The findings confirm that multimodal machine learning classification can detect different types of stress reactions from baseline while focusing on physiologically sensible changes. Since the measured signals and feature selection affected classification performance the most, data analytic choices left limited input information uncompensated.

Researchers increasingly turn to explainable artificial intelligence (XAI) to analyze omics data and gain insights into the underlying biological processes. Yet, given the interdisciplinary nature of the field, many findings have only been shared in their respective research community. An overview of XAI for omics data is needed to highlight promising approaches and help detect common issues. Toward this end, we conducted a systematic mapping study. To identify relevant literature, we queried Scopus, PubMed, Web of Science, BioRxiv, MedRxiv and arXiv. Based on keywording, we developed a coding scheme with 10 facets regarding the studies\' AI methods, explainability methods and omics data. Our mapping study resulted in 405 included papers published between 2010 and 2023. The inspected papers analyze DNA-based (mostly genomic), transcriptomic, proteomic or metabolomic data by means of neural networks, tree-based methods, statistical methods and further AI methods. The preferred post-hoc explainability methods are feature relevance (n = 166) and visual explanation (n = 52), while papers using interpretable approaches often resort to the use of transparent models (n = 83) or architecture modifications (n = 72). With many research gaps still apparent for XAI for omics data, we deduced eight research directions and discuss their potential for the field. We also provide exemplary research questions for each direction. Many problems with the adoption of XAI for omics data in clinical practice are yet to be resolved. This systematic mapping study outlines extant research on the topic and provides research directions for researchers and practitioners.

UNASSIGNED: Cardiovascular disease (CVD) and cancer are the first and second causes of death in over 130 countries across the world. They are also among the top three causes in almost 180 countries worldwide. Cardiovascular complications are often noticed in cancer patients, with nearly 20% exhibiting cardiovascular comorbidities. Physical exercise may be helpful for cancer survivors and people living with cancer (PLWC), as it prevents relapses, CVD, and cardiotoxicity. Therefore, it is beneficial to recommend exercise as part of cardio-oncology preventive care.
UNASSIGNED: With the progress of deep learning algorithms and the improvement of big data processing techniques, artificial intelligence (AI) has gradually become popular in the fields of medicine and healthcare. In the context of the shortage of medical resources in China, it is of great significance to adopt AI and machine learning methods for prescription recommendations. This study aims to develop an interpretable machine learning-based intelligent system of exercise prescription for cardio-oncology preventive care, and this paper presents the study protocol.
UNASSIGNED: This will be a retrospective machine learning modeling cohort study with interventional methods (i.e., exercise prescription). We will recruit PLWC participants at baseline (from 1 January 2025 to 31 December 2026) and follow up over several years (from 1 January 2027 to 31 December 2028). Specifically, participants will be eligible if they are (1) PLWC in Stage I or cancer survivors from Stage I; (2) aged between 18 and 55 years; (3) interested in physical exercise for rehabilitation; (4) willing to wear smart sensors/watches; (5) assessed by doctors as suitable for exercise interventions. At baseline, clinical exercise physiologist certificated by the joint training program (from 1 January 2023 to 31 December 2024) of American College of Sports Medicine and Chinese Association of Sports Medicine will recommend exercise prescription to each participant. During the follow-up, effective exercise prescription will be determined by assessing the CVD status of the participants.
UNASSIGNED: This study aims to develop not only an interpretable machine learning model to recommend exercise prescription but also an intelligent system of exercise prescription for precision cardio-oncology preventive care.
UNASSIGNED: This study is approved by Human Experimental Ethics Inspection of Guangzhou Sport University.
UNASSIGNED: http://www.chictr.org.cn, identifier ChiCTR2300077887.

Injury, hospitalization, and even death are common consequences of falling for elderly people. Therefore, early and robust identification of people at risk of recurrent falling is crucial from a preventive point of view. This study aims to evaluate the effectiveness of an interpretable semi-supervised approach in identifying individuals at risk of falls by using the data provided by ankle-mounted IMU sensors. Our method benefits from the cause-effect link between a fall event and balance ability to pinpoint the moments with the highest fall probability. This framework also has the advantage of training on unlabeled data, and one can exploit its interpretation capacities to detect the target while only using patient metadata, especially those in relation to balance characteristics. This study shows that a visual-based self-attention model is able to infer the relationship between a fall event and loss of balance by attributing high values of weight to moments where the vertical acceleration component of the IMU sensors exceeds 5 m/s² during an especially short period. This semi-supervised approach uses interpretable features to highlight the moments of the recording that may explain the score of balance, thus revealing the moments with the highest risk of falling. Our model allows for the detection of 71% of the possible falling risk events in a window of 1 s (500 ms before and after the target) when compared with threshold-based approaches. This type of framework plays a paramount role in reducing the costs of annotation in the case of fall prevention when using wearable devices. Overall, this adaptive tool can provide valuable data to healthcare professionals, and it can assist them in enhancing fall prevention efforts on a larger scale with lower costs.

BACKGROUND: Hepatitis C is a prevalent disease that poses a high risk to the human liver. Early diagnosis of hepatitis C is crucial for treatment and prognosis. Therefore, developing an effective medical decision system is essential. In recent years, many computational methods have been proposed to identify hepatitis C patients. Although existing hepatitis prediction models have achieved good results in terms of accuracy, most of them are black-box models and cannot gain the trust of doctors and patients in clinical practice. As a result, this study aims to use various Machine Learning (ML) models to predict whether a patient has hepatitis C, while also using explainable models to elucidate the prediction process of the ML models, thus making the prediction process more transparent.
RESULTS: We conducted a study on the prediction of hepatitis C based on serological testing and provided comprehensive explanations for the prediction process. Throughout the experiment, we modeled the benchmark dataset, and evaluated model performance using fivefold cross-validation and independent testing experiments. After evaluating three types of black-box machine learning models, Random Forest (RF), Support Vector Machine (SVM), and AdaBoost, we adopted Bayesian-optimized RF as the classification algorithm. In terms of model interpretation, in addition to using common SHapley Additive exPlanations (SHAP) to provide global explanations for the model, we also utilized the Local Interpretable Model-Agnostic Explanations with stability (LIME_stabilitly) to provide local explanations for the model.
CONCLUSIONS: Both the fivefold cross-validation and independent testing show that our proposed method significantly outperforms the state-of-the-art method. IHCP maintains excellent model interpretability while obtaining excellent predictive performance. This helps uncover potential predictive patterns of the model and enables clinicians to better understand the model\'s decision-making process.

The COVID-19 patients in the convalescent stage noticeably have pulmonary diffusing capacity impairment (PDCI). The pulmonary diffusing capacity is a frequently-used indicator of the COVID-19 survivors\' prognosis of pulmonary function, but the current studies focusing on prediction of the pulmonary diffusing capacity of these people are limited. The aim of this study was to develop and validate a machine learning (ML) model for predicting PDCI in the COVID-19 patients using routinely available clinical data, thus assisting the clinical diagnosis.
Collected from a follow-up study from August to September 2021 of 221 hospitalized survivors of COVID-19 18 months after discharge from Wuhan, including the demographic characteristics and clinical examination, the data in this study were randomly separated into a training (80%) data set and a validation (20%) data set. Six popular machine learning models were developed to predict the pulmonary diffusing capacity of patients infected with COVID-19 in the recovery stage. The performance indicators of the model included area under the curve (AUC), Accuracy, Recall, Precision, Positive Predictive Value(PPV), Negative Predictive Value (NPV) and F1. The model with the optimum performance was defined as the optimal model, which was further employed in the interpretability analysis. The MAHAKIL method was utilized to balance the data and optimize the balance of sample distribution, while the RFECV method for feature selection was utilized to select combined features more favorable to machine learning.
A total of 221 COVID-19 survivors were recruited in this study after discharge from hospitals in Wuhan. Of these participants, 117 (52.94%) were female, with a median age of 58.2 years (standard deviation (SD) = 12). After feature selection, 31 of the 37 clinical factors were finally selected for use in constructing the model. Among the six tested ML models, the best performance was accomplished in the XGBoost model, with an AUC of 0.755 and an accuracy of 78.01% after experimental verification. The SHAPELY Additive explanations (SHAP) summary analysis exhibited that hemoglobin (Hb), maximal voluntary ventilation (MVV), severity of illness, platelet (PLT), Uric Acid (UA) and blood urea nitrogen (BUN) were the top six most important factors affecting the XGBoost model decision-making.
The XGBoost model reported here showed a good prognostic prediction ability for PDCI of COVID-19 survivors during the recovery period. Among the interpretation methods based on the importance of SHAP values, Hb and MVV contributed the most to the prediction of PDCI outcomes of COVID-19 survivors in the recovery period.