integrated diagnosis

综合诊断
  • 文章类型: Journal Article
    目的:胶质神经和神经元肿瘤是罕见的原发性中枢神经系统恶性肿瘤,具有异质性特征。由于这些恶性肿瘤的罕见性,诊断和治疗仍然是临床挑战。方法:在这里,我们进行了叙述性综述,旨在调查与诊断有关的主要问题,病理学,神经胶质神经肿瘤的临床治疗。结果:由于在组织学和分子生物学水平上更好的表征,诊断标准最近被推翻。对这些肿瘤中发生的基因组改变的研究使我们能够确定潜在的治疗靶点,包括BRAF。FGFR,PDGFRA结论:允许对疾病进行分子测序DNA甲基化评估的技术是必不可少的诊断工具。局部区域治疗失败后,应将靶向剂包括在治疗性医疗设备中。
    [方框:见正文]。
    Aim: Glioneuronal and neuronal tumors are rare primary central nervous system malignancies with heterogeneous features. Due to the rarity of these malignancies diagnosis and treatment remains a clinical challenge. Methods: Here we performed a narrative review aimed to investigate the principal issues concerning the diagnosis, pathology, and clinical management of glioneuronal tumors. Results: Diagnostic criteria have been recently overturned thanks to a better characterization on a histological and molecular biology level. The study of genomic alterations occurring within these tumors has allowed us to identify potential therapeutic targets including BRAF, FGFR, and PDGFRA. Conclusion: Techniques allowing molecular sequencing DNA methylation assessment of the disease are essential diagnostic tools. Targeting agents should be included in the therapeutic armamentarium after loco-regional treatment failure.
    [Box: see text].
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  • 文章类型: Journal Article
    2021年世界卫生组织中枢神经系统肿瘤分类更新了神经胶质瘤亚型和分级系统,并将EGFR扩增(Amp)作为胶质母细胞瘤(GBM)的诊断标志物之一。
    本研究旨在描述频率,基于最新分类的EGFRAmp在弥漫性胶质瘤中的临床价值和分子相关性。
    我们回顾了2011年至2022年在我们医院的神经胶质瘤患者,其中包括187名成人神经胶质瘤患者,有可用的肿瘤组织用于检测EGFRAmp和其他59个感兴趣的分子标志物。临床,根据EGFRAmp在不同胶质瘤亚型中的状态分析影像学和病理学资料。
    163个胶质瘤被分类为成人型弥漫性胶质瘤,星形细胞瘤的数量,少突胶质细胞瘤和GBM分离为41、46和76。EGFRAmp在IDH野生型弥漫性神经胶质瘤(66.0%)和GBM(85.5%)中比IDH突变型弥漫性神经胶质瘤(32.2%)及其亚型(星形细胞瘤,29.3%;少突胶质细胞瘤,34.8%)。EGFRAmp未对IDH突变型弥漫性神经胶质瘤和星形细胞瘤的总生存期(OS)进行分层,虽然与IDH野生型弥漫性神经胶质瘤的OS较差显著相关,组织学2级和3级IDH-野生型弥漫性星形胶质细胞瘤和GBM。
    我们的研究验证了EGFRAmp是GBM的诊断标志物,并且仍然是该组中OS缩短的有用预测因子。
    UNASSIGNED: The 2021 World Health Organization Classification of Central Nervous System Tumors updates glioma subtyping and grading system, and incorporates EGFR amplification (Amp) as one of diagnostic markers for glioblastoma (GBM).
    UNASSIGNED: This study aimed to describe the frequency, clinical value and molecular correlation of EGFR Amp in diffuse gliomas based on the latest classification.
    UNASSIGNED: We reviewed glioma patients between 2011 and 2022 at our hospital, and included 187 adult glioma patients with available tumor tissue for detection of EGFR Amp and other 59 molecular markers of interest. Clinical, radiological and pathological data was analyzed based on the status of EGFR Amp in different glioma subtypes.
    UNASSIGNED: 163 gliomas were classified as adult-type diffuse gliomas, and the number of astrocytoma, oligodendroglioma and GBM was 41, 46, and 76. EGFR Amp was more common in IDH-wildtype diffuse gliomas (66.0%) and GBM (85.5%) than IDH-mutant diffuse gliomas (32.2%) and its subtypes (astrocytoma, 29.3%; oligodendroglioma, 34.8%). EGFR Amp did not stratify overall survival (OS) in IDH-mutant diffuse gliomas and astrocytoma, while was significantly associated with poorer OS in IDH-wildtype diffuse gliomas, histologic grade 2 and 3 IDH-wildtype diffuse astrocytic gliomas and GBM.
    UNASSIGNED: Our study validated EGFR Amp as a diagnostic marker for GBM and still a useful predictor for shortened OS in this group.
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  • 文章类型: Journal Article
    目的:已在脑脊液(CSF)中鉴定出神经胶质瘤的驱动突变。在这里,我们使用下一代测序(NGS)比较了CSF和肿瘤组织之间的一致性,以评估在胶质瘤中CSF检测的可行性。患者和方法:通过基于NGS的定制基因小组对神经胶质瘤患者的27个配对的CSF/肿瘤组织进行测序。手术前通过腰椎穿刺收集所有CSF样品。根据2021年WHO对中枢神经系统肿瘤的分类,通过组织学和肿瘤DNA分子病理学分析进行综合诊断。结果:共有24例患者可检测到循环肿瘤DNA(ctDNA),22例患者在CSF中至少有一个体细胞突变或染色体改变。不同年龄的ctDNA水平差异很大,Ki-67指数,磁共振成像信号与胶质瘤亚型有关(p<0.05)。整合ctDNA诊断与最终诊断之间的一致性达到91.6%(Kappa,0.800)。我们根据CSFctDNA测序结果对3例患者的临床诊断进行了重新分类,4例患者根据肿瘤DNA重新评估。有趣的是,在CSFctDNA中鉴定出一种罕见的IDH1R132C,但在相应的肿瘤样本中没有.结论:本研究证明了整合ctDNA诊断与最终诊断胶质瘤之间的高度一致性。强调基于NGS的CSF突变检测在辅助胶质瘤综合诊断中的实用性,尤其是胶质母细胞瘤.
    Purpose: The driver mutations of gliomas have been identified in cerebrospinal fluid (CSF). Here we compared the concordance between CSF and tumor tissue for integrated diagnosis in gliomas using next-generation sequencing (NGS) to evaluate the feasibility of CSF detection in gliomas. Patients and methods: 27 paired CSF/tumor tissues of glioma patients were sequenced by a customized gene panel based on NGS. All CSF samples were collected through lumbar puncture before surgery. Integrated diagnosis was made by analysis of histology and tumor DNA molecular pathology according to the 2021 WHO classification of the central nervous system tumors. Results: A total of 24 patients had detectable circulating tumor DNA (ctDNA) and 22 had at least one somatic mutation or chromosome alteration in CSF. The ctDNA levels varied significantly across different ages, Ki-67 index, magnetic resonance imaging signal and glioma subtypes (p < 0.05). The concordance between integrated ctDNA diagnosis and the final diagnosis came up to 91.6% (Kappa, 0.800). We reclassified the clinical diagnosis of 3 patients based on the results of CSF ctDNA sequencing, and 4 patients were reassessed depending on tumor DNA. Interestingly, a rare IDH1 R132C was identified in CSF ctDNA, but not in the corresponding tumor sample. Conclusion: This study demonstrates a high concordance between integrated ctDNA diagnosis and the final diagnosis of gliomas, highlighting the practicability of NGS based detection of mutations of CSF in assisting integrated diagnosis of gliomas, especially glioblastoma.
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  • 文章类型: Journal Article
    集成测试,治疗和护理是解决结核病和艾滋病毒双重负担的关键战略。GeneXpert仪器允许同时进行艾滋病毒和结核病检测,但是它在集成测试中的利用率仍然不够理想。
    该研究确定了在GeneXpert平台上集成结核病检测和HIV早期婴儿检测(EID)的程度,或在选定的卫生设施整合的潜力。
    使用2017年至2019年的实验室记录的回顾性二次数据分析以及半结构化访谈进行了混合方法评估。数据收集于2020年1月至2020年3月在莱索托。
    采访了13个医疗机构的44名医务人员:一个地区,九区,三级诊所。六个是政府设施,六个是任务医院,一个是非营利性诊所.所有选定的设施都至少有一台用于结核病或艾滋病毒检测的GeneXpert仪器;没有一个包括同时检测结核病和艾滋病毒。2017年,用于结核病和EID检测的GeneXpert仪器的平均使用率为63%和24%,而在2019年,结核病检测的平均使用率为61%,EID的平均使用率为27%。
    除了三个检测率很高的地点,利用率足够低,以至于2017年和2019年进行的所有HIVEID和结核病检测都可以仅使用目前专用于结核病检测的仪器进行。在GeneXpert仪器上整合结核病和艾滋病毒检测的机会是错失的。
    这项研究增加了关于检测一体化必要性的大量证据,并强调了成功实施结核病和艾滋病毒一体化检测的一些实际和技术考虑因素。
    UNASSIGNED: Integrated testing, treatment and care are key strategies for addressing the dual burdens of tuberculosis and HIV. The GeneXpert instrument allows simultaneous HIV and tuberculosis testing, but its utilisation for integrated testing remains suboptimal.
    UNASSIGNED: The study determined the extent to which tuberculosis testing and HIV early infant detection (EID) were integrated on the GeneXpert platform, or the potential for integration at selected health facilities.
    UNASSIGNED: A mixed methods evaluation was conducted using retrospective secondary data analysis of laboratory records from 2017 to 2019, and semi-structured interviews. Data were collected between January 2020 and March 2020 in Lesotho.
    UNASSIGNED: Forty-four health staff were interviewed across 13 health facilities: one regional, nine district, and three clinic level. Six were government facilities, six were mission hospitals, and one was a non-profit clinic. All facilities selected had at least one GeneXpert instrument used for tuberculosis or HIV testing; none included simultaneous testing for tuberculosis and HIV. In 2017, the average utilisation rate for the GeneXpert instrument for tuberculosis and EID testing was 63% and 24%, while in 2019, the average utilisation rate was 61% for tuberculosis testing and 27% for EID.
    UNASSIGNED: Except for three sites where the testing rates were high, utilisation rates were sufficiently low that all the HIV EID and tuberculosis tests undertaken in 2017 and 2019 could have been performed using only the instruments currently dedicated to tuberculosis testing. There is a missed opportunity for the integration of testing for tuberculosis and HIV on the GeneXpert instrument.
    UNASSIGNED: This study adds to the body of evidence on the need for integration of testing and highlights some practical and technical considerations for successful implementation of integrated tuberculosis and HIV testing.
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  • 文章类型: Case Reports
    最新的WHO中枢神经系统(CNS)肿瘤分类强调了在中枢神经系统肿瘤检查过程中采用综合诊断方法的必要性。除了突变状态,肿瘤甲基化谱的评估是一个有用的(通常是必要的)工具,以作出正确和明确的诊断。在这里,我们介绍了一个多形性黄色星形细胞瘤的临床病例,放射学和组织病理学发现与最近描述的一种名为多形性低度神经上皮肿瘤(PLNTY)的儿科型神经胶质瘤明显重叠。这里讨论的鉴别诊断代表了现代神经病理学的方法论范式。事实上,这个案例的介绍表明,在日常实践中,临床,放射学,和组织病理学数据都可能具有误导性,只有结合分子分析才能达到正确的诊断。在现代神经肿瘤学中,到目前为止,所有处理脑肿瘤的专家都必须与其他专家一起“污染”他们自己的文化遗产,以最佳方式管理患有中枢神经系统肿瘤的患者。
    The latest WHO Classification of tumours of the Central Nervous System (CNS) emphasizes the necessity of an integrated diagnostic approach during the workup of a CNS neoplasm. In addition to the mutational status, assessment of methylation profile of a tumour emerged as a helpful (often necessary) tool to make a correct and unequivocal diagnosis. Here we present a case of a Pleomorphic Xanthoastrocytoma with clinical, radiological and histopathological findings remarkably overlapping with a recently described paediatric-type glioma namly Polymorphic Low-grade Neuroepithelial Tumour of the Young (PLNTY). The differential diagnosis here discussed represents a methodological paradigm in the modern neuropathology. In fact, the presentation of this case is a demonstration that in day-to-day practice, clinical, radiological, and histopathological data can all be misleading, and the correct diagnosis can only be reached by integration with molecular analysis. In the modern neuro-oncology, it is by far mandatory for all the specialists dealing with cerebral tumours to \"contaminate\" their own cultural heritage with other ones, to optimally manage a patient with CNS tumour.
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  • 文章类型: Journal Article
    世界卫生组织(WHO)第5版中枢神经系统肿瘤分类将特定的分子改变纳入神经胶质瘤的分类。分类方案的主要修订实现了神经胶质瘤的诊断和管理的重大变化。本研究旨在描述临床,分子,根据目前的WHO分类,胶质瘤及其亚型的预后特征。
    在北京协和医院接受了为期11年的胶质瘤手术的患者使用下一代测序重新检查肿瘤遗传改变,基于聚合酶链反应的检测,和荧光原位杂交方法,并纳入分析。
    将452例胶质瘤重新分类为成人型弥漫性胶质瘤(ntotal=373;星形细胞瘤,n=78;少突胶质细胞瘤,n=104;胶质母细胞瘤,n=191),小儿型弥漫性神经胶质瘤(ntotal=23;低度,n=8;高档,n=15),星形胶质细胞瘤(n=20),神经胶质神经和神经元肿瘤(n=36)。组成,定义,成人和儿童型神经胶质瘤的发病率在分类的第4和第5版之间发生了显着变化。临床,放射学,分子,并确定了胶质瘤各亚型的生存特征。CDK4/6、CIC、FGFR2/3/4,FUBP1,KIT,MET,NF1,PEG3,RB1和NTRK2是与不同亚型胶质瘤的生存相关的其他因素。
    基于组织学和分子改变的最新WHO分类更新了我们对临床的理解,放射学,分子,生存,和不同亚型胶质瘤的预后特征,并为患者的诊断和潜在预后提供准确的指导。
    UNASSIGNED: The 5th edition of the World Health Organization (WHO) classification of central nervous system tumors incorporated specific molecular alterations into the categorization of gliomas. The major revision of the classification scheme effectuates significant changes in the diagnosis and management of glioma. This study aimed to depict the clinical, molecular, and prognostic characteristics of glioma and its subtypes according to the current WHO classification.
    UNASSIGNED: Patients who underwent surgery for glioma at Peking Union Medical College Hospital during 11 years were re-examined for tumor genetic alterations using next-generation sequencing, polymerase chain reaction-based assay, and fluorescence in situ hybridization methods and enrolled in the analysis.
    UNASSIGNED: The enrolled 452 gliomas were reclassified into adult-type diffuse glioma (ntotal=373; astrocytoma, n=78; oligodendroglioma, n=104; glioblastoma, n=191), pediatric-type diffuse glioma (ntotal=23; low-grade, n=8; high-grade, n=15), circumscribed astrocytic glioma (n=20), and glioneuronal and neuronal tumor (n=36). The composition, definition, and incidence of adult- and pediatric-type gliomas changed significantly between the 4th and the 5th editions of the classification. The clinical, radiological, molecular, and survival characteristics of each subtype of glioma were identified. Alterations in CDK4/6, CIC, FGFR2/3/4, FUBP1, KIT, MET, NF1, PEG3, RB1, and NTRK2 were additional factors correlated with the survival of different subtypes of gliomas.
    UNASSIGNED: The updated WHO classification based on histology and molecular alterations has updated our understanding of the clinical, radiological, molecular, survival, and prognostic characteristics of varied subtypes of gliomas and provided accurate guidance for diagnosis and potential prognosis for patients.
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  • 文章类型: Journal Article
    中枢神经系统(CNS)肿瘤的分类是一个快速发展的领域。虽然肿瘤在历史上是根据形态学分类的,最近分子信息的整合极大地完善了这一过程。在某些情况下,分子改变提供了重要的预后意义,超出了仅通过形态学检查可以确定的范围.此外,肿瘤可能有分子改变提供治疗靶点。小儿中枢神经系统肿瘤,特别是,严重依赖分子数据与组织学的整合,临床,和影像学特征,以达到最准确的诊断。这篇综述旨在深入了解神经病理学家对小儿脑肿瘤的临床检查方法,最终目标是获得最准确的分类并告知预后和治疗选择的综合诊断。主要重点将集中在组织学和分子研究结果如何与临床和影像学信息结合使用,以达到最终的,综合诊断。
    The classification of tumors of the central nervous system (CNS) is a rapidly evolving field. While tumors were historically classified on the basis of morphology, the recent integration of molecular information has greatly refined this process. In some instances, molecular alterations provide significant prognostic implications beyond what can be ascertained by morphologic examination alone. Additionally, tumors may harbor molecular alterations that provide a therapeutic target. Pediatric CNS tumors, in particular, rely heavily on the integration of molecular data with histologic, clinical, and radiographic features to reach the most accurate diagnosis. This review aims to provide insight into a neuropathologist\'s approach to the clinical workup of pediatric brain tumors with an ultimate goal of reaching an integrated diagnosis that provides the most accurate classification and informs prognosis and therapy selection. The primary focus will center on how histology and molecular findings are used in combination with clinical and radiographic information to reach a final, integrated diagnosis.
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Journal Article
    弥漫性神经胶质瘤在2007年WHO将中枢神经系统肿瘤分类为星形细胞瘤,寡星形细胞瘤,以及II/III级少突胶质细胞瘤和WHOIV级胶质母细胞瘤,这是一个纯粹的形态学分类。世卫组织2016年分类将形态学与IDH等分子标记相结合,ATRX,和1p/19q共缺失,以给出综合诊断。
    该研究是在来自54名患者(包括3名儿科患者)的福尔马林固定的石蜡包埋组织上进行的。进行了分子研究以了解1p/19q共缺失状态,IDH1R132H,和ATRX免疫表达。此外,IDH1R132H状态与生存数据相关.
    该研究包括54个具有少突胶质细胞形态的肿瘤。在85%的总病例中发现IDH1R132H阳性,在72%中发现共缺失。综合诊断将病例修改为少突胶质细胞瘤(39),星形细胞瘤(5),和胶质母细胞瘤(6)。发现IDH突变肿瘤比阴性肿瘤具有更好的存活率,这在统计学上是显着的。
    本研究强调需要用IHC和荧光原位杂交等容易获得的技术对具有少突胶质细胞形态的肿瘤进行分子处理。
    UNASSIGNED: Diffuse gliomas are represented in the 2007 WHO classification of CNS tumors as astrocytomas, oligoastrocytoma, and oligodendroglioma of grades II/III and glioblastomas WHO grade IV, which was a pure morphologic classification. WHO 2016 classification combines morphology with molecular markers like IDH, ATRX, and 1p/19q codeletion to give an integrated diagnosis.
    UNASSIGNED: The study was carried out on formalin fixed paraffin embedded tissues from 54 patients including three pediatric patients. Molecular studies were performed to know the 1p/19q codeletion status, IDH1R132H, and ATRX immunoexpression. Also, the IDH1R132H status was correlated with survival data.
    UNASSIGNED: The study included 54 tumors with oligodendroglial morphology. IDH1R132H positivity was seen in 85% of total cases and codeletion was seen in 72%. The integrated diagnosis revised the cases into oligodendroglioma (39), astrocytoma (5), and glioblastoma (6).IDH mutant tumors were found to have better survival than negative ones which was statistically significant.
    UNASSIGNED: This study emphasizes the need for molecular work up of tumors with oligodendroglial morphology with readily available techniques like IHC and Fluorescence in situ hybridization.
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  • 文章类型: Journal Article
    背景:最近的基因组研究确定了髓母细胞瘤(MB)的四个离散分子亚群,2015年完善了亚组中儿童MB的风险分层.在这项研究中,我们调查了分子亚群对儿童MB危险分层的影响.
    方法:nCounter®系统和定制的癌症小组用于存档组织中的分子亚组和风险分层。
    结果:本研究共纳入44例患者。在临床风险分层中,根据残留肿瘤/转移的存在和组织学发现,将24和20例患者分为平均风险组和高风险组,分别。使用有限基因表达分析,在37例患者中成功定义了分子亚组,和DNA面板测序还对三名患者的分子亚组进行了分类。总的来说,40例患者分为以下分子亚组:WNT(n=7),SHH(n=4),第3组(n=8),和第4组(n=21)。排除无法确定分子亚群的四名患者,在临床风险分层的17名平均风险组患者中,SHH组中1例TP53变异体患者使用新的风险分类系统被重新分类为极高危.此外,在新的风险分类系统中,最初被分类为高风险组的23例患者中有5例被重新分类为低风险组或标准风险组。
    结论:纳入综合诊断的新风险分层与临床风险分层显示出一些差异。MB患者的定制治疗需要基于精确分子亚组的风险分层。
    BACKGROUND: Recent genomic studies identified four discrete molecular subgroups of medulloblastoma (MB), and the risk stratification of childhood MB in the context of subgroups was refined in 2015. In this study, we investigated the effect of molecular subgroups on the risk stratification of childhood MB.
    METHODS: The nCounter® system and a customized cancer panel were used for molecular subgrouping and risk stratification in archived tissues.
    RESULTS: A total of 44 patients were included in this study. In clinical risk stratification, based on the presence of residual tumor/metastasis and histological findings, 24 and 20 patients were classified into the average-risk and high-risk groups, respectively. Molecular subgroups were successfully defined in 37 patients using limited gene expression analysis, and DNA panel sequencing additionally classified the molecular subgroups in three patients. Collectively, 40 patients were classified into molecular subgroups as follows: WNT (n = 7), SHH (n = 4), Group 3 (n = 8), and Group 4 (n = 21). Excluding the four patients whose molecular subgroups could not be determined, among the 17 average-risk group patients in clinical risk stratification, one patient in the SHH group with the TP53 variant was reclassified as very-high-risk using the new risk classification system. In addition, 5 out of 23 patients who were initially classified as high-risk group in clinical risk stratification were reclassified into the low- or standard-risk groups in the new risk classification system.
    CONCLUSIONS: The new risk stratification incorporating integrated diagnosis showed some discrepancies with clinical risk stratification. Risk stratification based on precise molecular subgrouping is needed for the tailored treatment of MB patients.
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