individual variation

个体差异
  • 文章类型: Journal Article
    生物钟是大多数生物固有的,包括很少遇到直射光的隐生型动物,并调节他们的日常活动周期。一套保守的时钟基因支撑着这些节奏。在这项研究中,我们探索了赤粉甲虫的昼夜节律行为,一种影响全球储存谷物的重大害虫。我们报告了日常光线和温度线索如何同步这些甲虫中不同的活动模式,其特点是早上活动减少,晚上活动增加,预测各自的环境转变。虽然不太健壮,在恒定的黑暗和恒定的光照条件下保持运动活动的节律性。值得注意的是,我们观察到雄性比雌性更强烈的节律行为,个体差异超过了以前报道的其他昆虫物种。靶向Clock基因的RNA干扰削弱了运动活动节律。我们的发现证明了Castaneum中存在昼夜节律时钟和时钟控制行为。此外,它们突出了昼夜节律活动的实质性个体差异,为未来在生态和进化背景下昼夜节律个体差异的相关性研究奠定基础。
    Circadian clocks are inherent to most organisms, including cryptozoic animals that seldom encounter direct light, and regulate their daily activity cycles. A conserved suite of clock genes underpins these rhythms. In this study, we explore the circadian behaviors of the red flour beetle Tribolium castaneum, a significant pest impacting stored grain globally. We report on how daily light and temperature cues synchronize distinct activity patterns in these beetles, characterized by reduced morning activity and increased evening activity, anticipating the respective environmental transitions. Although less robust, rhythmicity in locomotor activity is maintained in constant dark and constant light conditions. Notably, we observed more robust rhythmic behaviors in males than females with individual variation exceeding those previously reported for other insect species. RNA interference targeting the Clock gene weakened locomotor activity rhythms. Our findings demonstrate the existence of a circadian clock and of clock-controlled behaviors in T. castaneum. Furthermore, they highlight substantial individual differences in circadian activity, laying the groundwork for future research on the relevance of individual variation in circadian rhythms in an ecological and evolutionary context.
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  • 文章类型: Journal Article
    在衰老中,生理网络的功能下降速度在个体之间不同,产生广泛的寿命分布。尽管70%的人类寿命差异仍然无法由遗传因素解释,关于衰老生理异质性的内在来源知之甚少。要了解复杂的生理网络如何产生寿命变化,需要新的方法。这里,我们提出Asynch-seq,一种使用等基因种群内基因表达异质性来研究产生寿命变异的过程的方法。通过收集数千个单个转录组,我们捕获了秀丽隐杆线虫“泛转录组”-非遗传变异的高度分辨图谱。我们使用我们的地图集来指导大规模的扰动筛选,确定种系和体细胞之间的总mRNA含量的解耦是衰老中生理异质性的最大来源。由多效基因驱动,这些基因的敲除大大降低了寿命差异。我们的工作证明了如何应用生理异质性的系统映射来减少衰老中的个体间差异。
    In aging, physiologic networks decline in function at rates that differ between individuals, producing a wide distribution of lifespan. Though 70% of human lifespan variance remains unexplained by heritable factors, little is known about the intrinsic sources of physiologic heterogeneity in aging. To understand how complex physiologic networks generate lifespan variation, new methods are needed. Here, we present Asynch-seq, an approach that uses gene-expression heterogeneity within isogenic populations to study the processes generating lifespan variation. By collecting thousands of single-individual transcriptomes, we capture the Caenorhabditis elegans \"pan-transcriptome\"-a highly resolved atlas of non-genetic variation. We use our atlas to guide a large-scale perturbation screen that identifies the decoupling of total mRNA content between germline and soma as the largest source of physiologic heterogeneity in aging, driven by pleiotropic genes whose knockdown dramatically reduces lifespan variance. Our work demonstrates how systematic mapping of physiologic heterogeneity can be applied to reduce inter-individual disparities in aging.
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  • 文章类型: Journal Article
    由互惠互动组成的生态网络可以突然过渡到不良状态,如崩溃,由于环境条件的微小变化,如当地环境温度的上升。然而,对这种相互作用网络适应温度升高和临界转变发生的能力知之甚少。这里,在生态进化框架中结合数量遗传学和互惠动力学,我们评估了随着环境温度升高,互惠网络对关键转变的稳定性和弹性。具体来说,我们模拟了最佳性状的动力学,该性状决定了物种对当地环境温度以及物种相互作用的耐受性。然后,我们评估了个体性状变异和进化动力学对可行均衡稳定性的影响,社区崩溃的阈值温度的出现,这种社区的突然崩溃。我们发现互惠的网络体系结构,这是群落的大小和物种相互作用的安排,与进化动力学相互作用,影响网络崩溃的开始。一些网络比其他网络更有能力跟踪温度上升,从而提高了网络崩溃的阈值温度。然而,这样的结果是由可遗传性状变异物种表现出的数量来调节的,平均最佳表型性状具有较高的性状变异,从而增加了网络崩溃的环境温度。此外,性状变异不仅增加了网络崩溃的温度,而且增加了可行平衡的局部稳定性。我们的研究认为,互惠的网络结构与物种进化动力学相互作用,并增加了网络适应温度变化的能力,从而延迟了社区崩溃的发生。
    Ecological networks comprising of mutualistic interactions can suddenly transition to undesirable states, such as collapse, due to small changes in environmental conditions such as a rise in local environmental temperature. However, little is known about the capacity of such interaction networks to adapt to a rise in temperature and the occurrence of critical transitions. Here, combining quantitative genetics and mutualistic dynamics in an eco-evolutionary framework, we evaluated the stability and resilience of mutualistic networks to critical transitions as environmental temperature increases. Specifically, we modelled the dynamics of an optimum trait that determined the tolerance of species to local environmental temperature as well as to species interaction. We then evaluated the impact of individual trait variation and evolutionary dynamics on the stability of feasible equilibria, the occurrence of threshold temperatures at which community collapses, and the abruptness of such community collapses. We found that mutualistic network architecture, that is the size of the community and the arrangement of species interactions, interacted with evolutionary dynamics to impact the onset of network collapses. Some networks had more capacity to track the rise in temperatures than others and thereby increased the threshold temperature at which the networks collapsed. However, such a result was modulated by the amount of heritable trait variation species exhibited, with high trait variation in the mean optimum phenotypic trait increasing the environmental temperature at which networks collapsed. Furthermore, trait variation not only increased the onset of temperatures at which networks collapsed but also increased the local stability of feasible equilibria. Our study argued that mutualistic network architecture interacts with species evolutionary dynamics and increases the capacity of networks to adapt to changes in temperature and thereby delayed the occurrence of community collapses.
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  • 文章类型: Journal Article
    有机农业被认为是最可持续的现代土壤种植形式。然而,它通常依赖于使用对周围野生动物不一定无害的化合物。在这项研究中,我们测试了硫酸铜的实际浓度的影响,硫酸铜主要用于有机农业作为杀菌剂,对拐杖昆虫的生态相关性状的影响。一种常见于欧洲耕地附近的物种。通过使用在普通花园中繁殖的第二代野生孤雌生殖雌性后代,我们测量了硫酸铜(CuSO4)对生活史(身体状况,鸡蛋的数量,和孵化成功)和个体的行为特征(活动和最大垂直速度)。我们观察到高的强烈负面影响,在暴露后12天内,硫酸铜在大多数性状上的实际浓度,而在较低浓度的污染物下影响不那么明显。我们的结果表明,硫酸铜的实际浓度可以损害调节野生动物生存和繁殖的重要特征,有这样的效果,然而,剂量依赖性。我们建议有机农业的常见做法需要进一步考虑其对野生动植物的生态和进化影响。
    Organic farming is considered the most sustainable form of modern soil cultivation. Yet it often relies on the use of chemical compounds that are not necessarily harmless for the surrounding wildlife. In this study, we tested the effects of realistic concentrations of copper sulphate-largely used in organic farming as a fungicide-on ecologically-relevant traits of the walking stick insect Bacillus rossius, a species commonly found in the proximity of cultivated fields across Europe. By using second-generation progeny of wild-caught parthenogenetic females bred in common gardens, we measured the impact of copper sulphate (CuSO4) on both the life-history (body condition, number of eggs, and hatching success) and behavioural traits (activity and maximum vertical speed) of the individuals. We observed strong negative effects of high, realistic concentrations of copper sulphate on most traits within 12 days of exposure, while effects were less evident at lower concentrations of the pollutant. Our results reveal that realistic concentrations of copper sulphate can compromise important traits that regulate both the survival and reproduction of animals in the wild, with such effects that are, however, dose dependent. We suggest that common practices in organic farming require further consideration on their ecological and evolutionary impact on wildlife.
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  • 文章类型: Journal Article
    动物从其环境中吸收氧气的最大速率(O2,max)是其生理学和生态学的关键方面。在鱼类中,通常通过在增量游泳测试或从穷举追逐中恢复过程中测量摄氧量来量化O2,max。在这篇评论中,我们汇编了最近的研究,将这两种技术应用于同一条鱼,并表明这两种方法通常对一组个体产生不同的O2,max的平均估计值。此外,在一群鱼里,游泳过程中确定的心氧最大值估计值与追逐恢复过程中确定的估计值相关性差(即个体的心氧最大值在不同方法中不可重复)。缺乏共识的一种解释是这些方法测量不同的生理状态,每个人都有自己的行为,解剖和生化决定因素。我们建议这些方法不能直接互换,但是,更确切地说,每个都适合解决鱼类生物学中的不同问题。我们建议研究人员选择反映其研究生物学背景的方法,并且我们主张使用准确的术语来承认用于升高血管O2的技术(例如,峰值血管O2,游泳或峰值血管O2,恢复)。如果研究的目的是估计\'真实\'O2,最大的个体或物种,我们建议试点研究比较方法,最好使用重复措施设计。我们希望这些建议能够为鱼类内部和之间的O2,max变化的原因和后果提供新的见解。
    The maximum rate at which animals take up oxygen from their environment (ṀO2,max) is a crucial aspect of their physiology and ecology. In fishes, ṀO2,max is commonly quantified by measuring oxygen uptake either during incremental swimming tests or during recovery from an exhaustive chase. In this Commentary, we compile recent studies that apply both techniques to the same fish and show that the two methods typically yield different mean estimates of ṀO2,max for a group of individuals. Furthermore, within a group of fish, estimates of ṀO2,max determined during swimming are poorly correlated with estimates determined during recovery from chasing (i.e. an individual\'s ṀO2,max is not repeatable across methods). One explanation for the lack of agreement is that these methods measure different physiological states, each with their own behavioural, anatomical and biochemical determinants. We propose that these methods are not directly interchangeable but, rather, each is suited to address different questions in fish biology. We suggest that researchers select the method that reflects the biological contexts of their study, and we advocate for the use of accurate terminology that acknowledges the technique used to elevate ṀO2 (e.g. peak ṀO2,swim or peak ṀO2,recovery). If the study\'s objective is to estimate the \'true\' ṀO2,max of an individual or species, we recommend that pilot studies compare methods, preferably using repeated-measures designs. We hope that these recommendations contribute new insights into the causes and consequences of variation in ṀO2,max within and among fish species.
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  • 文章类型: Journal Article
    宏观皮层网络的拓扑组织对于复杂脑功能的发展很重要。然而,皮质形态组织在妊娠晚期是如何发育的,在这一特定阶段是否表现出性别差异和个体差异仍不清楚.这里,我们基于在月经后30-44周(PMW)扫描的两个独立队列(横截面和纵向)的多模态MRI的形态学和微结构特征构建了形态测量相似性网络(MSN).在这些队列中还检查了MSN的性别差异和个体间差异。横截面分析表明,网络集成和隔离在非线性双相轨迹中都发生了变化,这得到了纵向分析结果的支持。群落结构显示出两侧半球之间的显着一致性,并在PMW之间保持稳定。初级皮层内的连通性比高级社区内的连通性增强得更快。与女性相比,男性新生儿在前额叶和顶叶皮质内的参与系数显着降低,而他们的整体网络组织和社区架构保持可比性。此外,通过使用形态相似性作为特征,我们从出生后获得的图像中识别足月等效年龄的个体的准确率超过65%,反之亦然。这些发现为整个围产期皮质形态相似性的发展提供了全面的见解,增强我们对早期神经解剖组织建立的理解。
    The topological organization of the macroscopic cortical networks important for the development of complex brain functions. However, how the cortical morphometric organization develops during the third trimester and whether it demonstrates sexual and individual differences at this particular stage remain unclear. Here, we constructed the morphometric similarity network (MSN) based on morphological and microstructural features derived from multimodal MRI of two independent cohorts (cross-sectional and longitudinal) scanned at 30-44 postmenstrual weeks (PMW). Sex difference and inter-individual variations of the MSN were also examined on these cohorts. The cross-sectional analysis revealed that both network integration and segregation changed in a nonlinear biphasic trajectory, which was supported by the results obtained from longitudinal analysis. The community structure showed remarkable consistency between bilateral hemispheres and maintained stability across PMWs. Connectivity within the primary cortex strengthened faster than that within high-order communities. Compared to females, male neonates showed a significant reduction in the participation coefficient within prefrontal and parietal cortices, while their overall network organization and community architecture remained comparable. Furthermore, by using the morphometric similarity as features, we achieved over 65 % accuracy in identifying an individual at term-equivalent age from images acquired after birth, and vice versa. These findings provide comprehensive insights into the development of morphometric similarity throughout the perinatal cortex, enhancing our understanding of the establishment of neuroanatomical organization during early life.
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  • 文章类型: Journal Article
    胃形态可以提供对生物体饮食的见解。在大多数分类单元中,肠道大小或长度通常与饮食质量成反比。并已用于评估各种系统的饮食质量。然而,它需要动物牺牲和耗时的解剖。与饮食相关的外部形态测量可能更简单,更具成本效益的解决方案。在物种层面,短尾草蟹甲壳前胃区域的外部测量可以预测胃的大小和饮食质量,有人建议,这种方法也可以在个人层面上检查个人的饮食偏好和专业化;如果是,胃前区域的大小可用于预测个体的饮食质量和消费趋势,这将简化螃蟹的饮食研究。这里,我们测试了外部胃前区域大小是否可以预测侵入性亚洲岸蟹半血蟹个体在整个纬度和一年中的时间的内部胃大小。我们发现,胃前区域的宽度随身体大小的增加速度快于胃宽度。此外,与胃宽度相比,胃前区域的宽度在不同部位和时间上遵循不同的趋势.因此,我们的结果表明,胃前区可能不能用作个体胃大小变化的代表。
    Stomach morphology can provide insights into an organism\'s diet. Gut size or length is typically inversely related to diet quality in most taxa, and has been used to assess diet quality in a variety of systems. However, it requires animal sacrifice and time-consuming dissections. Measures of external morphology associated with diet may be a simpler, more cost-effective solution. At the species level, external measures of the progastric region of the carapace in brachyuran crabs can predict stomach size and diet quality, with some suggestion that this approach may also work to examine individual diet preferences and specialization at the individual level; if so, the size of the progastric region could be used to predict trends in diet quality and consumption for individuals, which would streamline diet studies in crabs. Here, we tested whether external progastric region size predicts internal stomach size across latitude and time of year for individuals of the invasive Asian shore crab Hemigrapsus sanguineus. We found that the width of the progastric region increased at a faster rate with body size than stomach width. In addition, the width of the progastric region followed different trends across sites and over time compared to stomach width. Our results therefore suggest that the progastric region may not be used as a proxy for stomach size variation across individuals.
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  • 文章类型: Journal Article
    温度和性能之间的关系可以通过热性能曲线(TPC)来说明,这已被证明对描述“热生态和进化”的各个方面很有用。由于环境条件的大规模变化,TPC的参数可以在地理上变化。然而,只有一些研究试图量化热性能在相对较小的空间尺度上的变化,即使在同一位置或在一个物种内的个体之间一致。这里,我们量化了在智利南部温带雨林中发现的5种两栖动物Eupsophus物种运动性能的热敏感性的个体和物种变化,并将其估计值与表现出更广泛分布范围的共生物种进行了比较。我们测量了五种不同温度下的临界热极限和跳跃性能。我们的结果表明,在系统发育过程中,热响应相对保守,由于与Batrachylataeniata和Rhinellaspinulosa观察到的结果相比,Eupsophus物种的运动性能和活动的热窗口仍然狭窄。此外,我们发现大多数物种的运动性能存在显著的个体差异,在不同温度下观察到的性能个体一致性。进一步的分析探讨了身体大小对物种内部和物种之间的运动性能和临界热极限的影响。我们的结果表明,在热耐受宽度和运动性能之间存在权衡方案,表现出更宽的热范围的物种可能会损害性能。有趣的是,这些特征似乎部分是由体型变化介导的,对潜在的生态影响提出质疑。
    The relationship between temperature and performance can be illustrated through a thermal performance curve (TPC), which has proven useful in describing various aspects of ectotherms\' thermal ecology and evolution. The parameters of the TPC can vary geographically due to large-scale variations in environmental conditions. However, only some studies have attempted to quantify how thermal performance varies over relatively small spatial scales, even in the same location or consistently among individuals within a species. Here, we quantified individual and species variation in thermal sensitivity of locomotor performance in five amphibia Eupsophus species found in the temperate rainforests of southern Chile and compared their estimates against co-occurring species that exhibit a substantially more extensive distributional range. We measured critical thermal limits and jumping performance under five different temperatures. Our results suggest that thermal responses are relatively conserved along the phylogeny, as the locomotor performance and thermal windows for activity remained narrow in Eupsophus species when compared against results observed for Batrachyla taeniata and Rhinella spinulosa. Additionally, we found significant individual differences in locomotor performance within most species, with individual consistency in performance observed across varied temperatures. Further analyses explored the influence of body size on locomotor performance and critical thermal limits within and between species. Our results suggest a trade-off scenario between thermal tolerance breadth and locomotor performance, where species exhibiting broader thermal ranges might have compromised performance. Interestingly, these traits seem partly mediated by body size variations, raising questions about potential ecological implications.
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  • 文章类型: Journal Article
    个性化的社会利基出现在社会群体中,导致小组成员之间不同的社会行为概况。在敏感的生命阶段,个性化的社会生态位可以深刻地影响社会行为和相关表型的发展,如激素(例如皮质醇)浓度。专注于青春期,我们调查了个性化社会生态位之间的关系,社会行为,和皮质醇浓度(基线和反应性)在雌性豚鼠。女性在青春期早期被配对安置(最初的社会对形成),六周后,通过用较大或较小的女性代替伴侣,引起了社会生态位的转变。关于社会行为,在最初的社会对和社会生态位转变之后,优势地位都与侵略有关,结果表明,在社会生态位转变之后,侵略得到了迅速而彻底的重塑。同时,顺从行为在社会生态位转变后迅速被重塑,但这是不完整的。在最初的社会对中获得的优势地位影响了社会生态位转变后顺从行为的程度,在社会生态位转变三周后,这种影响仍然被发现。关于皮质醇浓度,在最初的社会对中占主导地位的女性中测量到较高的基线皮质醇浓度.在社会利基转变之后,皮质醇反应性显着增加的女性配对,相对于那些与较小的女性配对,年轻女性这些发现表明,青春期的社会生态位在塑造女性的行为和激素浓度中起着重要作用。
    Individualized social niches arise in social groups, resulting in divergent social behavior profiles among group members. During sensitive life phases, the individualized social niche can profoundly impact the development of social behavior and associated phenotypes such as hormone (e.g. cortisol) concentrations. Focusing on adolescence, we investigated the relationship between the individualized social niche, social behavior, and cortisol concentrations (baseline and responsiveness) in female guinea pigs. Females were pair-housed in early adolescence (initial social pair formation), and a social niche transition was induced after six weeks by replacing the partner with either a larger or smaller female. Regarding social behavior, dominance status was associated with aggression in both the initial social pairs and after the social niche transition, and the results suggest that aggression was rapidly and completely reshaped after the social niche transition. Meanwhile, submissive behavior was rapidly reshaped after the social niche transition, but this was incomplete. The dominance status attained in the initial social pair affected the extent of submissive behavior after the social niche transition, and this effect was still detected three weeks after the social niche transition. Regarding cortisol concentrations, higher baseline cortisol concentrations were measured in dominant females in the initial social pairs. After the social niche transition, cortisol responsiveness significantly increased for the females paired with a larger, older female relative to those paired with a smaller, younger female. These findings demonstrate that the social niche during adolescence plays a significant role in shaping behavior and hormone concentrations in females.
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  • 文章类型: Journal Article
    理解需要权衡的性状的进化是具有挑战性的,因为表型可以(共同)在个体之间和个体内部的水平上都不同。个体间的协变表明一致,可能是遗传的,个人如何解决权衡的差异,而个体内协变则表明性状可塑性。在行为可塑性方面也存在个体差异一致的可能性,尽管这很少被调查。我们研究了声学广告信号的两个特征中(协)方差的来源,这些特征相互权衡,并且在灰色树蛙中处于性选择之下,Hylachrysoscelis:呼叫持续时间和呼叫速率。我们记录了多个夜晚的男性自发呼唤,并响应模拟不同比赛级别的回放。通话持续时间,通话率,和他们的产品,呼叫努力,在社会环境内和跨社会环境都是可重复的。呼叫持续时间和呼叫速率负向变化,最大的协方差在个体间水平。随着社会竞争的变化打电话有广泛的可塑性,我们发现了一些个体间呼叫率可塑性差异的证据。性状值的显着负个体间协方差垂直于该物种的性选择的主要方向,指示对选择的响应的潜在限制。
    Understanding the evolution of traits subject to trade-offs is challenging because phenotypes can (co)vary at both the among- and within-individual levels. Among-individual covariation indicates consistent, possibly genetic, differences in how individuals resolve the trade-off, while within-individual covariation indicates trait plasticity. There is also the potential for consistent among-individual differences in behavioral plasticity, although this has rarely been investigated. We studied the sources of (co)variance in two characteristics of an acoustic advertisement signal that trade-off with one another and are under sexual selection in the gray treefrog, Hyla chrysoscelis: call duration and call rate. We recorded males on multiple nights calling spontaneously and in response to playbacks simulating different competition levels. Call duration, call rate, and their product, call effort, were all repeatable both within and across social contexts. Call duration and call rate covaried negatively, and the largest covariance was at the among-individual level. There was extensive plasticity in calling with changes in social competition, and we found some evidence for among-individual variance in call rate plasticity. The significant negative among-individual covariance in trait values is perpendicular to the primary direction of sexual selection in this species, indicating potential limits on the response to selection.
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