importins/exportins

Importins / exportins
  • 文章类型: Journal Article
    核质转运(NCT)的破坏是神经退行性疾病的重要机制。在C9orf72-ALS的情况下,通过C9orf72翻译的含精氨酸的二肽重复蛋白(R-DPRs)与核运输受体的Kapβ家族的结合可能会阻碍大分子通过核孔复合物(NPC)的运输。除了Kapβs,其他几种类型的转运成分与R-DPR表达细胞中的NCT损伤有关,但是这些观察的分子起源尚未得到澄清。这里,我们采用氨基酸分辨率的粗粒度分子动力学模型来研究PolyPR之间的直接相互作用,毒性最强的DPR,和各种核转运成分来阐明结合机制,并提供潜在的polyPR介导的NCT缺陷的完整图片。我们发现polyPR直接与Impa家族的几种亚型结合,CAS(Impa的特定出口商)和RanGAP。我们观察到polyPR和Ran之间没有结合。较低盐浓度下的较长polyPR也与RanGEF和NTF2接触。分析转运成分上的polyPR接触位点表明,polyPR可能会干扰RanGTP/RanGDP结合,含有核定位信号(NLS)的货物(cargo-NLS)与Impa结合,随着货物-NLS从Impa释放,并从原子核导出Impα。多种转运成分上的polyPR结合位点的丰度与固有的polyPR长度依赖性相结合,使得NCT的直接polyPR干扰成为C9orf72毒性的潜在机制途径。
    The disruption of nucleocytoplasmic transport (NCT) is an important mechanism in neurodegenerative diseases. In the case of C9orf72-ALS, trafficking of macromolecules through the nuclear pore complex (NPC) might get frustrated by the binding of C9orf72-translated arginine-containing dipeptide repeat proteins (R-DPRs) to the Kapβ family of nuclear transport receptors. Besides Kapβs, several other types of transport components have been linked to NCT impairments in R-DPR-expressed cells, but the molecular origin of these observations has not been clarified. Here, we adopt a coarse-grained molecular dynamics model at amino acid resolution to study the direct interaction between polyPR, the most toxic DPR, and various nuclear transport components to elucidate the binding mechanisms and provide a complete picture of potential polyPR-mediated NCT defects. We found polyPR to directly bind to several isoforms of the Impα family, CAS (the specific exporter of Impα) and RanGAP. We observe no binding between polyPR and Ran. Longer polyPRs at lower salt concentrations also make contact with RanGEF and NTF2. Analyzing the polyPR contact sites on the transport components reveals that polyPR potentially interferes with RanGTP/RanGDP binding, with nuclear localization signal (NLS)-containing cargoes (cargo-NLS) binding to Impα, with cargo-NLS release from Impα, and with Impα export from the nucleus. The abundance of polyPR-binding sites on multiple transport components combined with the inherent polyPR length dependence makes direct polyPR interference of NCT a potential mechanistic pathway of C9orf72 toxicity.
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  • 文章类型: Journal Article
    作为一种疾病,利什曼病在全球范围内被忽视的热带疾病和被忽视的贫困感染中仍然是一个不断的挑战。目前,对抗利什曼原虫热带感染的诊断和治疗不是实质性的补救措施,需要先进和具体的研究。因此,需要一种潜在的新靶点来克服已确定的药物模式在致病性方面的局限性.在这次审查中,我们在利什曼原虫核孔复合物的核孔中提出了一些从头算的发现。关于其他传染性原生生物。所以,通过结构分析和动力学研究,我们假设核孔分子机制和功能。看门人午睡,mRNA的输出,有丝分裂纺锤体的形成是细胞力学的显着特征,这受到动态核孔蛋白的调节。这里,各种研究表明,利什曼原虫物种的Nup93/NIC96,Nup155/Nup144,Mlp1/Mlp2/Tpr可以作为诊断标记,免疫调节,和新的药物靶标。核孔蛋白功能相互作用剂如NUP54/57,RNA解旋酶,泛素蛋白连接酶,外运1,推定的T淋巴细胞触发因子,和9个未表征的蛋白质表明很少有更高的目标。靶向利什曼原虫进口/出口的新药。并确定了Leptomycin-B的作用机制,正弦化合物,姜黄素,Selinexor可以是治疗学中的弧光。利什曼原虫核孔蛋白综述的实质是将我们的研究重新集中在热带疗法的崇高分子靶标上。
    UNASSIGNED:在线版本包含补充材料,可在10.1007/s12639-022-01515-0获得。
    As an ailment, leishmaniasis is still an incessant challenge in neglected tropical diseases and neglected infections of poverty worldwide. At present, the diagnosis and treatment to combat Leishmania tropical infections are not substantial remedies and require advanced & specific research. Therefore, there is a need for a potential novel target to overcome established medicament modalities\' limitations in pathogenicity. In this review, we proposed a few ab initio findings in nucleoporins of nuclear pore complex in Leishmania sp. concerning other infectious protists. So, through structural analysis and dynamics studies, we hypothesize the nuclear pore molecular machinery & functionality. The gatekeepers Nups, export of mRNA, mitotic spindle formation are salient features in cellular mechanics and this is regulated by dynamic nucleoporins. Here, diverse studies suggest that Nup93/NIC96, Nup155/Nup144, Mlp1/Mlp2/Tpr of Leishmania Species can be a picked out marker for diagnostic, immune-modulation, and novel drug targets. In silico prediction of nucleoporin-functional interactors such as NUP54/57, RNA helicase, Ubiquitin-protein ligase, Exportin 1, putative T-lymphocyte triggering factor, and 9 uncharacterized proteins suggest few more noble targets. The novel drug targeting to importins/exportins of Leishmania sp. and defining mechanism of Leptomycin-B, SINE compounds, Curcumins, Selinexor can be an arc-light in therapeutics. The essence of the review in Leishmania\'s nucleoporins is to refocus our research on noble molecular targets for tropical therapeutics.
    UNASSIGNED: The online version contains supplementary material available at 10.1007/s12639-022-01515-0.
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