heat-shock response

热冲击响应
  • 文章类型: Journal Article
    本研究旨在研究膳食补充姜黄必需的肉鸡是否可以减轻周期性热应激条件的影响。在生长阶段评估肠道和免疫学参数以及基因表达。根据完全随机设计,以4(饮食)×2(环境)阶乘排列和八次复制,共分配了320只21天大的雄性Cobb500肉鸡。饮食治疗包括不含精油的基础饮食(EO,阴性对照)和三种低(100mgkg-1)的饮食,中间体(200mgkg-1),或高(300mgkg-1)水平的姜黄EO。在热应激组中,在100和200mgkg-1时补充姜黄EO可改善体重,饲料转换,乳房产量,和相对肝脏重量。这些补充水平减少了绒毛宽度,绒毛/隐窝比率增加,降低了H/L比,并改善了热应激下鸟类的肝脏(HSP70和SREBP1)和肠道(OCLN)基因表达。这些发现支持姜黄EO可用于改善或恢复肠道完整性的假设。调节炎症参数,and,因此,提高受到循环热应激挑战的肉鸡的性能。
    This study aimed to examine whether dietary supplementation of broiler chickens with turmeric essential could mitigate the effects of cyclic heat stress conditions. Intestinal and immunological parameters and gene expression were evaluated during the grower phase. A total of 320 21-day-old male Cobb 500 broilers were distributed according to a completely randomized design with a 4 (diet) × 2 (environment) factorial arrangement and eight replications of five birds each. Dietary treatments consisted of a basal diet without essential oil (EO, negative control) and three diets containing low (100 mg kg-1), intermediate (200 mg kg-1), or high (300 mg kg-1) levels of turmeric EO. In the heat stress group, dietary supplementation with turmeric EO at 100 and 200 mg kg-1 improved body weight, feed conversion, breast yield, and relative liver weight. These supplementation levels reduced villus width, increased villus/crypt ratio, reduced the H/L ratio, and improved hepatic (HSP70 and SREBP1) and intestinal (OCLN) gene expression in birds under heat stress. These findings support the hypothesis that turmeric EO can be used to improve or restore intestinal integrity, modulate inflammation parameters, and, consequently, enhance the performance of broilers challenged by cyclic heat stress.
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  • 文章类型: Journal Article
    背景:钙依赖性蛋白激酶(CDPK)在棉花对非生物胁迫的耐受性中起关键作用。然而,其在棉花热胁迫耐受性中的作用尚不清楚。这里,我们描述了GhCDPK基因家族及其表达谱,目的是鉴定与热应激耐受性相关的CDPK基因。
    结果:这项研究揭示了棉花基因组中的48个GhCDPK成员,分布在18条染色体上。树系统发育分析显示GhCDPKs的三个主要聚类组。顺式元件揭示了许多非生物胁迫和植物激素途径保守的启动子区域。同样,对GhCDPK基因中转录因子结合位点(TFBDS)的分析显示许多应激和激素相关位点。基于qRT-PCR的表达分析表明GhCDPK16对高温胁迫具有高度响应性。GhCDPK16随后的蛋白质-蛋白质相互作用揭示了与ROS产生的可预测的相互作用,钙结合,和ABA信号蛋白。GhCDPK16在棉花和拟南芥中的过表达通过降低ROS化合物的积累来提高耐热性。在热应力下,通过qRT-PCR分析证明,GhCDPK16转基因系上调了热诱导基因GhHSP70,GHSP17.3和GhGR1。相反,棉花中GhCDPK16敲除系表现出ROS积累的增加。此外,在GhCDPK16-ox转基因品系中,抗氧化酶活性得到了显着增强。
    结论:集体发现表明GhCDPK16可能是增强棉花耐热性的可行基因,因此,提高棉花耐热性的潜在候选基因。
    BACKGROUND: Calcium-dependent protein kinase (CDPK) plays a key role in cotton tolerance to abiotic stress. However, its role in cotton heat stress tolerance is not well understood. Here, we characterize the GhCDPK gene family and their expression profiles with the aim of identifying CDPK genes associated with heat stress tolerance.
    RESULTS: This study revealed 48 GhCDPK members in the cotton genome, distributed on 18 chromosomes. Tree phylogenetic analysis showed three main clustering groups of the GhCDPKs. Cis-elements revealed many abiotic stress and phytohormone pathways conserved promoter regions. Similarly, analysis of the transcription factor binding sites (TFBDS) in the GhCDPK genes showed many stress and hormone related sites. The expression analysis based on qRT-PCR showed that GhCDPK16 was highly responsive to high-temperature stress. Subsequent protein-protein interactions of GhCDPK16 revealed predictable interaction with ROS generating, calcium binding, and ABA signaling proteins. Overexpression of GhCDPK16 in cotton and Arabidopsis improved thermotolerance by lowering ROS compound buildup. Under heat stress, GhCDPK16 transgenic lines upregulated heat-inducible genes GhHSP70, GHSP17.3, and GhGR1, as demonstrated by qRT-PCR analysis. Contrarily, GhCDPK16 knockout lines in cotton exhibited an increase in ROS accumulation. Furthermore, antioxidant enzyme activity was dramatically boosted in the GhCDPK16-ox transgenic lines.
    CONCLUSIONS: The collective findings demonstrated that GhCDPK16 could be a viable gene to enhance thermotolerance in cotton and, therefore, a potential candidate gene for improving heat tolerance in cotton.
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  • 文章类型: Journal Article
    背景:热应激(HS)是全球家禽生产和福利方面最重要的环境压力因素之一。确定创新和有效的解决方案是必要的。这项研究评估了含有bellirica和穿心莲的植物性饲料添加剂(PHY)对行为模式的影响,血液学和生化参数,氧化应激生物标志物,和HSP70,I-FABP2,IL10,TLR4和mTOR基因在慢性HS条件下肉鸡不同器官中的表达。将总共208只一天大的Avian-480肉鸡随机分配到四个处理中(4个重复/处理,52只鸟/处理):热中向控制处理(TN,饲喂基础饮食);热中性处理(TN,饲喂基础日粮+1公斤/吨饲料PHY);热应激处理(HS,饲喂基础日粮);热应激治疗(HS,饲喂基础日粮+1公斤/吨饲料PHY)。
    结果:研究结果表明,HS导致摄食减少,觅食,走路,和舒适行为,同时增加饮酒和休息行为,HS也增加了红色,和白细胞(红细胞和白细胞)计数,和嗜红细胞/淋巴细胞(H/L)比(P<0.05);而两者的平均红细胞体积(MCV),平均红细胞血红蛋白(MCH)降低(P<0.05)。此外,HS负面影响脂质,蛋白质,和葡萄糖水平,肝肾功能检查,和氧化生物标志物通过增加丙二醛(MDA)水平和降低谷胱甘肽(GSH)活性(P<0.05)。热应激(HS)引起十二指肠内HSP70、TLR4基因表达上调,以及所有研究组织中I-FABP2,IL10,mTOR的下调,和肝脏TLR4(P<0.05)与TN治疗相比。植物性饲料添加剂(PHY)通过改善肉鸡的行为有效缓解热应激对肉鸡的负面影响,血液学,生物化学,和氧化应激生物标志物,HSP70表达水平显着降低,而所有组织均显示I-FABP2,IL10,TLR4和mTOR(肝脏除外)水平升高(P<0.05)。
    结论:含有bellirica和穿心莲的植物性饲料添加剂(PHY)改善了HS诱导的氧化应激,提高了免疫力以及肉仔鸡的肠道健康和福利。
    BACKGROUND: Heat stress (HS) is one of the most significant environmental stressors on poultry production and welfare worldwide. Identification of innovative and effective solutions is necessary. This study evaluated the effects of phytogenic feed additives (PHY) containing Terminalia bellirica and Andrographis paniculata on behavioral patterns, hematological and biochemical parameters, Oxidative stress biomarkers, and HSP70, I-FABP2, IL10, TLR4, and mTOR genes expression in different organs of broiler chickens under chronic HS conditions. A total of 208 one-day-old Avian-480 broiler chicks were randomly allocated into four treatments (4 replicate/treatment, 52 birds/treatment): Thermoneutral control treatment (TN, fed basal diet); Thermoneutral treatment (TN, fed basal diet + 1 kg/ton feed PHY); Heat stress treatment (HS, fed basal diet); Heat stress treatment (HS, fed basal diet + 1 kg/ton feed PHY).
    RESULTS: The findings of the study indicate that HS led to a decrease in feeding, foraging, walking, and comfort behavior while increasing drinking and resting behavior, also HS increased red, and white blood cells (RBCs and WBCs) counts, and the heterophile/ lymphocyte (H/L) ratio (P < 0.05); while both mean corpuscular volume (MCV), and mean corpuscular hemoglobin (MCH) were decreased (P < 0.05). In addition, HS negatively impacted lipid, protein, and glucose levels, liver and kidney function tests, and oxidative biomarkers by increasing malondialdehyde (MDA) levels and decreasing reduced glutathion (GSH) activity (P < 0.05). Heat stress (HS) caused the upregulation in HSP70, duodenal TLR4 gene expression, and the downregulation of I-FABP2, IL10, mTOR in all investigated tissues, and hepatic TLR4 (P < 0.05) compared with the TN treatment. Phytogenic feed additives (PHY) effectively mitigated heat stress\'s negative impacts on broilers via an improvement of broilers\' behavior, hematological, biochemical, and oxidative stress biomarkers with a marked decrease in HSP70 expression levels while all tissues showed increased I-FABP2, IL10, TLR4, and mTOR (except liver) levels (P < 0.05).
    CONCLUSIONS: Phytogenic feed additives (PHY) containing Terminalia bellirica and Andrographis paniculata have ameliorated the HS-induced oxidative stress and improved the immunity as well as the gut health and welfare of broiler chickens.
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  • 文章类型: Journal Article
    全球变暖是导致全球植物生产力下降的主要环境压力。一些有益的微生物减少压力;然而,植物-微生物相互作用发生和减少胁迫的机制仍有待完全阐明。本研究的目的是阐明植物生长促进根瘤菌菌株SH-19与Pungsannamul品种的大豆之间的相互作用。结果表明,SH-19具有多个促进植物生长的性状,例如吲哚-3-乙酸的生产,铁载体,和胞外多糖,并具有磷酸盐溶解的能力。耐热性分析表明SH-19可以承受高达45°C的温度。使用16S核糖体DNA基因序列技术将菌株SH-19鉴定为巨大假单胞菌。接种SH-19大豆可改善高温胁迫下的幼苗特性。这可能是由于与阴性对照组相比,内源性水杨酸水平增加和脱落酸水平降低。SH-19菌株增加了内源性抗氧化防御系统的活性,导致GSH上调(44.8%),SOD(23.1%),APX(11%),和CAT(52.6%)。此外,本研究涉及转录因子GmHSP,GmbZIP1和GmNCED3。结果显示两种转录因子GmbZIP1上调(17%),GmNCED3(15%)参与ABA生物合成和诱导的气孔调节,同样,观察到GmHSP表达模式下调25%。总的来说,这项研究的结果表明,菌株SH-19促进植物生长,减少高温应力,并通过调节内源性植物激素改善生理参数,抗氧化防御系统,和基因表达。分离的菌株(SH-19)可以作为生物肥料商业化。
    Global warming is a leading environmental stress that reduces plant productivity worldwide. Several beneficial microorganisms reduce stress; however, the mechanism by which plant-microbe interactions occur and reduce stress remains to be fully elucidated. The aim of the present study was to elucidate the mutualistic interaction between the plant growth-promoting rhizobacterial strain SH-19 and soybeans of the Pungsannamul variety. The results showed that SH-19 possessed several plant growth-promoting traits, such as the production of indole-3-acetic acid, siderophore, and exopolysaccharide, and had the capacity for phosphate solubilisation. The heat tolerance assay showed that SH-19 could withstand temperatures up to 45 °C. The strain SH-19 was identified as P. megaterium using the 16S ribosomal DNA gene sequence technique. Inoculation of soybeans with SH-19 improved seedling characteristics under high-temperature stress. This may be due to an increase in the endogenous salicylic acid level and a decrease in the abscisic acid level compared with the negative control group. The strain of SH-19 increased the activity of the endogenous antioxidant defense system, resulting in the upregulation of GSH (44.8%), SOD (23.1%), APX (11%), and CAT (52.6%). Furthermore, this study involved the transcription factors GmHSP, GmbZIP1, and GmNCED3. The findings showed upregulation of the two transcription factors GmbZIP1 (17%), GmNCED3 (15%) involved in ABA biosynthesis and induced stomatal regulation, similarly, a downregulation of the expression pattern of GmHSP by 25% was observed. Overall, the results of this study indicate that the strain SH-19 promotes plant growth, reduces high-temperature stress, and improves physiological parameters by regulating endogenous phytohormones, the antioxidant defense system, and genetic expression. The isolated strain (SH-19) could be commercialized as a biofertilizer.
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  • 文章类型: Journal Article
    热胁迫(HS)对植物的生存提出了重大挑战,需要复杂的分子机制来维持细胞稳态。这里,我们确定SICKLE(SIC)是拟南芥(拟南芥)中HS反应的关键调节剂。SIC是RNA脱糖酶1(DBR1)的螯合所必需的,套索内含子RNA(lariRNA)衰变的限速酶,转化为应激颗粒(SGs)。通过SIC隔离DBR1增强lariRNAs的积累,在前mRNA剪接过程中从切除的内含子衍生的分支环状RNA,进而促进其亲本基因的转录。我们的发现进一步表明,SIC介导的SGs中的DBR1隔离对于植物HS耐受性至关重要,因为SIC的N端缺失(SIC1-244)会损害DBR1的固存并损害植物对HS的反应。总的来说,我们的研究揭示了HS反应中的转录调控机制,通过DBR1隔离富集lariRNAs,最终促进热胁迫耐受基因的转录。
    Heat stress (HS) poses a significant challenge to plant survival, necessitating sophisticated molecular mechanisms to maintain cellular homeostasis. Here, we identify SICKLE (SIC) as a key modulator of HS responses in Arabidopsis (Arabidopsis thaliana). SIC is required for the sequestration of RNA DEBRANCHING ENZYME 1 (DBR1), a rate-limiting enzyme of lariat intronic RNA (lariRNA) decay, into stress granules (SGs). The sequestration of DBR1 by SIC enhances the accumulation of lariRNAs, branched circular RNAs derived from excised introns during pre-mRNA splicing, which in turn promote the transcription of their parental genes. Our findings further demonstrate that SIC-mediated DBR1 sequestration in SGs is crucial for plant HS tolerance, as deletion of the N-terminus of SIC (SIC1-244) impairs DBR1 sequestration and compromises plant response to HS. Overall, our study unveils a mechanism of transcriptional regulation in the HS response, where lariRNAs are enriched through DBR1 sequestration, ultimately promoting the transcription of heat stress tolerance genes.
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  • 文章类型: Journal Article
    热应力带来了重大的环境挑战,对小麦生产力产生了深远的影响。它会破坏重要的生理过程,如光合作用,通过阻碍光合装置的功能和损害质膜稳定性,从而不利地影响小麦的谷物发育。与耐热性相关的已识别标记性状关联的缺乏在针对热应激的标记辅助选择策略的开发中存在巨大障碍。为了解决这个问题,小麦种质系统地暴露在正常和热胁迫条件下,并收集了包括脯氨酸含量在内的生理性状的表型数据,冠层温度下降,细胞膜损伤,光合速率,蒸腾速率(在营养和生殖阶段和“保持绿色”。主成分分析阐明了最重要的贡献者是脯氨酸含量,蒸腾速率,和冠层温度下降,与籽粒产量呈协同关系。值得注意的是,聚类分析根据生理属性将小麦种质划分为四个离散组。此外,探讨生理性状与DNA标记的关系,用186个SSR对158个小麦种质进行了基因分型。发现等位基因频率和多态信息含量值在基因组A上最高(4.94和0.688),染色体1A(5.00和0.712),和标记Xgwm44(13.0和0.916)。人口结构,主坐标分析和聚类分析还根据基因型数据将小麦种质划分为四个亚群,强调它们的遗传同质性。种群多样性和连锁不平衡的存在确定了种群对关联映射的适用性。此外,连锁不平衡衰减在染色体1A的15-20cM区域内最为明显。关联图谱显示,在Bonferroni校正P<0.00027时,标记性状关联非常显著。标记Xwmc418(位于染色体3D)和Xgwm233(染色体7A)显示与蒸腾速率相关,而标记Xgwm494(染色体3A)在热胁迫条件下在营养和生殖阶段均表现出与光合速率的关联。此外,标记Xwmc201(染色体6A)和Xcfa2129(染色体1A)显示出与冠层温度降低的强关联,而标记物Xbarc163(染色体4B)和Xbarc49(染色体5A)在两个阶段都与细胞膜损伤密切相关。值得注意的是,标记Xbarc49(5A染色体)在热应激条件下与“保持绿色”性状显着相关。这些结果为标记辅助选择提供了潜在的效用,基因金字塔和基因组选择模型,以预测热胁迫条件下小麦的表现。
    Heat stress poses a significant environmental challenge that profoundly impacts wheat productivity. It disrupts vital physiological processes such as photosynthesis, by impeding the functionality of the photosynthetic apparatus and compromising plasma membrane stability, thereby detrimentally affecting grain development in wheat. The scarcity of identified marker trait associations pertinent to thermotolerance presents a formidable obstacle in the development of marker-assisted selection strategies against heat stress. To address this, wheat accessions were systematically exposed to both normal and heat stress conditions and phenotypic data were collected on physiological traits including proline content, canopy temperature depression, cell membrane injury, photosynthetic rate, transpiration rate (at vegetative and reproductive stage and \'stay-green\'. Principal component analysis elucidated the most significant contributors being proline content, transpiration rate, and canopy temperature depression, which exhibited a synergistic relationship with grain yield. Remarkably, cluster analysis delineated the wheat accessions into four discrete groups based on physiological attributes. Moreover, to explore the relationship between physiological traits and DNA markers, 158 wheat accessions were genotyped with 186 SSRs. Allelic frequency and polymorphic information content value were found to be highest on genome A (4.94 and 0.688), chromosome 1A (5.00 and 0.712), and marker Xgwm44 (13.0 and 0.916). Population structure, principal coordinate analysis and cluster analysis also partitioned the wheat accessions into four subpopulations based on genotypic data, highlighting their genetic homogeneity. Population diversity and presence of linkage disequilibrium established the suitability of population for association mapping. Additionally, linkage disequilibrium decay was most pronounced within a 15-20 cM region on chromosome 1A. Association mapping revealed highly significant marker trait associations at Bonferroni correction P < 0.00027. Markers Xwmc418 (located on chromosome 3D) and Xgwm233 (chromosome 7A) demonstrated associations with transpiration rate, while marker Xgwm494 (chromosome 3A) exhibited an association with photosynthetic rates at both vegetative and reproductive stages under heat stress conditions. Additionally, markers Xwmc201 (chromosome 6A) and Xcfa2129 (chromosome 1A) displayed robust associations with canopy temperature depression, while markers Xbarc163 (chromosome 4B) and Xbarc49 (chromosome 5A) were strongly associated with cell membrane injury at both stages. Notably, marker Xbarc49 (chromosome 5A) exhibited a significant association with the \'stay-green\' trait under heat stress conditions. These results offers the potential utility in marker-assisted selection, gene pyramiding and genomic selection models to predict performance of wheat accession under heat stress conditions.
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  • 文章类型: Journal Article
    抗火树种在森林防火中起着至关重要的作用,利用几种生理和分子机制来应对极端的热应激。已知许多转录因子(TF)和基因参与植物热胁迫反应的调节网络。然而,它们对火灾引起的高温的反应作用尚不清楚。在这项研究中,我们调查了Schimasuperba,一棵耐火的树,阐明这些机制。将S.superba幼苗的叶子暴露于火刺激10s,30s,1分钟,接下来是24小时的恢复期。组装了十五个转录组以鉴定受高温影响的关键分子和生物学途径。差异表达基因(DEGs)分析揭示了参与热应激反应的必需候选基因和TFs,包括乙烯响应因素的成员,WRKY,MYB,bHLH,和Nin-like家庭.与热休克蛋白/因子相关的基因,脂质代谢,抗氧化酶,脱水反应,热应激和恢复后激素信号转导差异表达,强调它们在细胞过程和热应激后的恢复中的作用。这项研究提高了我们对植物对极端非生物胁迫的反应和防御策略的理解。
    Fire-resistant tree species play a crucial role in forest fire prevention, utilizing several physiological and molecular mechanisms to respond to extreme heat stress. Many transcription factors (TFs) and genes are known to be involved in the regulatory network of heat stress response in plants. However, their roles in response to high temperatures induced by fire remain less understood. In this study, we investigated Schima superba, a fire-resistant tree, to elucidate these mechanisms. Leaves of S. superba seedlings were exposed to fire stimulation for 10 s, 30 s, and 1 min, followed by a 24-h recovery period. Fifteen transcriptomes were assembled to identify key molecular and biological pathways affected by high temperatures. Differentially expressed genes (DEGs) analysis revealed essential candidate genes and TFs involved in the heat stress response, including members of the ethylene-responsive factors, WRKY, MYB, bHLH, and Nin-like families. Genes related to heat shock proteins/factors, lipid metabolism, antioxidant enzymes, dehydration responses, and hormone signal transduction were differentially expressed after heat stress and recovery, underscoring their roles in cellular process and recovery after heat stress. This study advances our understanding of plant response and defense strategies against extreme abiotic stresses.
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  • 文章类型: Journal Article
    玉米是重要的食品和饲料产品,非生物胁迫显著影响其生长发育。拟南芥(ATL),RING-H2E3亚家族的成员,调节拟南芥的各种生理过程和应激反应。然而,ATL在玉米中的作用仍未被探索。在这项研究中,我们系统地鉴定了玉米基因组中编码ATL的基因。结果表明,玉米ATL家族共有77个成员,都被预测位于细胞膜和细胞质中,具有高度保守的环域。组织特异性表达分析表明,ATL家族基因在不同组织中的表达水平存在显着差异。对非生物胁迫数据的检查表明,在不同的胁迫条件下,ATL基因的表达水平显着波动。为进一步了解高温胁迫下玉米ATL家族基因的生物学功能,我们研究了拟南芥中玉米ZmATL家族基因ZmATL10及其同源基因AtATL27的高温表型。结果表明,ZmATL10和AtATL27基因的过表达增强了对高温胁迫的抗性。
    Maize is a significant food and feed product, and abiotic stress significantly impacts its growth and development. Arabidopsis Toxicosa en Levadura (ATL), a member of the RING-H2 E3 subfamily, modulates various physiological processes and stress responses in Arabidopsis. However, the role of ATL in maize remains unexplored. In this study, we systematically identified the genes encoding ATL in the maize genome. The results showed that the maize ATL family consists of 77 members, all predicted to be located in the cell membrane and cytoplasm, with a highly conserved RING domain. Tissue-specific expression analysis revealed that the expression levels of ATL family genes were significantly different in different tissues. Examination of the abiotic stress data revealed that the expression levels of ATL genes fluctuated significantly under different stress conditions. To further understand the biological functions of maize ATL family genes under high-temperature stress, we studied the high-temperature phenotypes of the maize ZmATL family gene ZmATL10 and its homologous gene AtATL27 in Arabidopsis. The results showed that overexpression of the ZmATL10 and AtATL27 genes enhanced resistance to high-temperature stress.
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  • 文章类型: Journal Article
    热应激记忆是使植物适应高温胁迫的丰富策略之一。建立和维持热应激记忆的潜在机制知之甚少,尽管染色质开放状态似乎是维持热应力记忆的重要结构基础。染色质开放状态受表观遗传修饰的影响,使DNA和组蛋白修饰成为理解热休克记忆的重要切入点。目前的研究表明,传统的热应激信号通路成分可能参与染色质开放,从而促进植物热应激记忆的建立。在这次审查中,我们讨论了基于染色质结构的维持与建立热应激记忆之间的关系。我们还讨论了传统的热应激信号与表观遗传修饰之间的关联。最后,我们讨论了未来探索植物适应高温胁迫的潜在研究思路。
    Among the rich repertoire of strategies that allow plants to adapt to high-temperature stress is heat-stress memory. The mechanisms underlying the establishment and maintenance of heat-stress memory are poorly understood, although the chromatin opening state appears to be an important structural basis for maintaining heat-stress memory. The chromatin opening state is influenced by epigenetic modifications, making DNA and histone modifications important entry points for understanding heat-shock memory. Current research suggests that traditional heat-stress signaling pathway components might be involved in chromatin opening, thereby promoting the establishment of heat-stress memory in plants. In this review, we discuss the relationship between chromatin structure-based maintenance and the establishment of heat-stress memory. We also discuss the association between traditional heat-stress signals and epigenetic modifications. Finally, we discuss potential research ideas for exploring plant adaptation to high-temperature stress in the future.
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  • 文章类型: Journal Article
    虹鳟鱼(Oncorhynchusmykiss,Walbaum,1792)是一种重要的经济冷水鱼,易受热应激的影响。迄今为止,虹鳟鱼的热应激反应在转录水平上得到了更广泛的理解,虽然在翻译水平上进行的研究很少。揭示虹鳟鱼热应激的翻译调控,在这项研究中,我们在正常和热应激条件下对虹鳟鱼肝脏进行了核糖体分析。RNA-seq数据与核糖体谱分析数据的比较分析表明,转录水平上基因表达的折叠变化与翻译水平上的折叠变化中度相关。总的来说,1213个基因在翻译水平上显著改变。然而,只有32.8%的基因在两个水平之间是共同的,证明热应激在转录和翻译水平上是协调的。此外,809个基因在翻译效率(TE)方面表现出显著差异,这些基因的TE受GC含量等因素的影响很大,编码序列长度,和上游开放阅读框(uORF)存在。此外,在2676个基因中鉴定出3468个潜在的uORFs,这可能会影响主开放阅读框的TE。在这项研究中,Ribo-seq和RNA-seq首次用于阐明热应激下虹鳟鱼转录和翻译的协调调节。这些发现有望为有关鱼类热应激反应的国际文献提供新的数据和理论见解。
    Rainbow trout (Oncorhynchus mykiss, Walbaum, 1792) is an important economic cold-water fish that is susceptible to heat stress. To date, the heat stress response in rainbow trout is more widely understood at the transcriptional level, while little research has been conducted at the translational level. To reveal the translational regulation of heat stress in rainbow trout, in this study, we performed a ribosome profiling assay of rainbow trout liver under normal and heat stress conditions. Comparative analysis of the RNA-seq data with the ribosome profiling data showed that the folding changes in gene expression at the transcriptional level are moderately correlated with those at the translational level. In total, 1213 genes were significantly altered at the translational level. However, only 32.8% of the genes were common between both levels, demonstrating that heat stress is coordinated across both transcriptional and translational levels. Moreover, 809 genes exhibited significant differences in translational efficiency (TE), with the TE of these genes being considerably affected by factors such as the GC content, coding sequence length, and upstream open reading frame (uORF) presence. In addition, 3468 potential uORFs in 2676 genes were identified, which can potentially affect the TE of the main open reading frames. In this study, Ribo-seq and RNA-seq were used for the first time to elucidate the coordinated regulation of transcription and translation in rainbow trout under heat stress. These findings are expected to contribute novel data and theoretical insights to the international literature on the thermal stress response in fish.
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