Sargassum horneri, a prevalent species of brown algae found along the coast of the northwest Pacific Ocean, holds significant importance as a valuable source of bioactive compounds. However, its rapid growth can lead to the formation of a destructive \"golden tide\", causing severe damage to the local economy and coastal ecosystems. In this study, we carried out de novo whole-genome sequencing of S. horneri using next-generation sequencing to unravel the genetic information of this alga. By utilizing a reference-guided de novo assembly pipeline with a closely related species, we successfully established a final assembled genome with a total length of 385 Mb. Repetitive sequences made up approximately 30.6% of this genome. Among the identified putative genes, around 87.03% showed homology with entries in the NCBI non-redundant protein database, with Ectocarpus siliculosus being the most closely related species for approximately one-third of these genes. One gene encoding an alkaline phosphatase family protein was found to exhibit positive selection, which could give a clue for the formation of S. horneri golden tides. Additionally, we characterized putative genes involved in fucoidan biosynthesis metabolism, a significant pathway in S. horneri. This study represents the first genome-wide characterization of a S. horneri species, providing crucial insights for future investigations, such as ecological genomic analyses.

Golden tide, caused by Sargassum horneri, is becoming another periodic and trans-regional harmful macroalgal bloom in the Yellow Sea (YS) and East China Sea (ECS) other than the green tide. In this study, we employed high-resolution remote sensing, field validations, and population genetics to investigate the spatiotemporal development pattern of Sargassum blooms during the years 2017 to 2021 and explore the potential environmental factors that influence them. Sporadic floating Sargassum rafts could be detected in the middle or northern YS during autumn and the distribution area then occurred sequentially along the Chinese and/or western Korean coastlines. The floating biomass amplified significantly in early spring, reached its maximum in two to three months with an evident northward expansion, and then declined rapidly in May or June. The scale of the spring bloom was much larger than the winter one in terms of coverage, suggesting an additional local source in ECS. The blooms were mostly confined to waters with a sea surface temperature range of 10-16℃, while the drifting pathways were consistent with the prevailing wind trajectory and surface currents. The floating S. horneri populations exhibited a homogenous and conservative genetic structure among years. Our findings underscore the year-round cycle of golden tides, the impact of physical hydrological environments on the drifting and blooming of pelagic S. horneri, and provide insights for monitoring and forecasting this emerging marine ecological disaster.

Since 2011, a massive influx of pelagic brown algae Sargassum has invaded coastlines causing environmental and economic disaster. Valorizing this plentiful macroalgae can present much needed economic relief to the areas affected. Here the production of biodiesel and a high-value alginate stream using Sargassum biomass collected from the coast of Quintana Roo, Mexico is reported. Biomass was pretreated via AEA (Alginate Extraction Autohydrolysis) and enzymatic saccharification via fungal Solid State Fermentation, releasing 7 g/L total sugars. The sugar mixture was fermented using engineered Yarrowia lipolytica resulting in 0.35 g/L total lipid titer at the lab tube scale. Additionally, the capability of extracting 0.3875 g/g DW of a high-value, purified alginate stream from this material is demonstrated. The findings presented here are promising and suggest an opportunity for the optimization and scale up of a biodiesel production biorefinery for utilization of Sargassum seaweeds during seasons of high invasion.

Harmful macroalgal blooms (HMBs) have been increasing along China\'s coasts, causing significant social impacts and economic losses. Besides extensive eutrophication sustaining coastal seaweed tides, the stimuli and dynamics of macroalgal blooms in China are quite complex and require comprehensive studies. This review summarizes the distinct genesis, development and drifting patterns of three HMBs that have persistently occurred in China\'s coastal waters during recent years: transregional green tides of drifting Ulva prolifera in the Yellow Sea (YS), local green tides of multiple suspended seaweeds in the Bohai Sea and large-scale golden tides of pelagic Sargassum horneri in the YS and East China Sea. While specific containment measures have been developed and implemented to effectively suppress large-scale green tides in the YS, the origin and blooming mechanism of golden tides remain unclear due to lack of field research. With the broad occurrence of HMBs and their increased accumulation on beaches and coastal waters, it is necessary to investigate the blooming mechanism and ecological impacts of these HMBs, especially with the growing stresses of climate change and anthropogenic disturbances.

Sargassum horneri is a habitat-forming species in the Northwest Pacific and an important contributor to seaweed rafts. In this study, 131 benthic samples and 156 floating samples were collected in the Yellow Sea and East China Sea (ECS) to test the effects of seaweed rafts on population structure and connectivity. Our results revealed high levels of genetic diversity in both benthic and floating samples based on concatenated mitochondrial markers (rpl5-rps3, rnl-atp9, and cob-cox2). Phylogenetic analyses consistently supported the existence of two lineages (lineages I and II), with divergence dating to c. 0.692 Mya (95% HPD: 0.255-1.841 Mya), indicating that long-term isolation may have occurred during the mid-Pleistocene (0.126-0.781 Mya). Extended Bayesian skyline plots demonstrated a constant population size over time in lineage I and slight demographic expansion in lineage II. Both lineages were found in each marginal sea (including both benthic and floating samples), but PCoA, FST , and AMOVA analyses consistently revealed deep genetic variation between regions. Highly structured phylogeographic pattern supports limited genetic connectivity between regions. IMA analyses demonstrated that asymmetric gene flow between benthic populations in the North Yellow Sea (NYS) and ECS was extremely low (ECS→NYS, 2Nm = 0.6), implying that high dispersal capacity cannot be assumed to lead to widespread population connectivity, even without dispersal barriers. In addition, there were only a few shared haplotypes between benthic and floating samples, suggesting the existence of hidden donors for the floating masses in the Chinese marginal seas.

The golden tide, caused by the brown algae Sargassum horneri, exerts severe influences on the Pyropia aquaculture of Jiangsu coast, China. To study the outbreak of the golden tide in response to increasing greenhouse gas emissions, S. horneri was cultured under four conditions: ambient condition (10 °C, 400 μatm), elevated temperature condition (14 °C, 400 μatm), elevated CO2 level (10 °C, 1000 μatm), and potential greenhouse condition (14 °C, 1000 μatm). The growth, photosynthetic performances, and inorganic carbon affinity of S. horneri were studied. The results showed that elevated temperature exerted a more pronounced positive influence on S. horneri growth, photosynthesis, and carbon assimilation than CO2 enrichment. The growth of S. horneri was significantly improved by moderately elevated temperatures, especially under concurrently elevated CO2 levels. This suggests that the greenhouse effect will benefit growth and carbon sequestration of S. horneri, which may enhance the frequency and scale of golden tides.

Golden tides dominated by Sargassum spp. are occurring at an accelerated rate worldwide. In China, Sargassum has started to bloom in the Yellow Sea and led to tremendous economic losses, but the underlying biological causes and mechanisms are still unclear. Although algae-associated bacteria were suggested to play crucial roles in algal blooms, the profiles of bacteria associated with drifting Sargassum remain unexplored. In this study, the community structures and functions of Sargassum-associated bacteria were analyzed using the high-throughput sequencing data of the V5-V7 hypervariable region of the 16S rRNA gene. Molecular identification revealed that the golden tide analyzed in the Yellow Sea was dominated by a single species, Sargassum horneri. They were a healthy brown color nearshore but were yellow offshore with significantly decreased chlorophyll contents (P < 0.01), which indicates that yellow S. horneri was under physiological stress. The structural and functional analyses of bacterial communities indicated that the drifting S. horneri had an obvious selectivity on their associated bacteria against surrounding seawater. Although the bacterial communities phylogenetically differed between brown and yellow S. horneri (P < 0.01), their dominant functions were all nitrogen and iron transporters, which strongly indicates microbial contribution to blooming of the algal host. For the first time, potential epiphytic and endophytic bacteria associated with Sargassum were independently analyzed by a modified co-vortex method with silica sand. We showed that the composition of dominant endophytes, mainly Bacillus and Propionibacterium, was relatively consistent regardless of host status, whereas the epiphytic operational taxonomic units (OTUs) greatly varied in response to weakness of host status; however, dominant functions were consistent at elevated intensities, which might protect the host from stress related to nitrogen or iron deficiency. Thus, we propose that host physiological status at different intensities of functional demands, which were related to variable environmental conditions, may be a critical factor that influences the assembly of epiphytic bacterial communities. This study provided new insight into the structure and potential functions of associated bacteria with golden tide blooms.