Black tea is the second most common type of tea in China. Fermentation is one of the most critical processes in its production, and it affects the quality of the finished product, whether it is insufficient or excessive. At present, the determination of black tea fermentation degree completely relies on artificial experience. It leads to inconsistent quality of black tea. To solve this problem, we use machine vision technology to distinguish the degree of fermentation of black tea based on images, this paper proposes a lightweight convolutional neural network (CNN) combined with knowledge distillation to discriminate the degree of fermentation of black tea. After comparing 12 kinds of CNN models, taking into account the size of the model and the performance of discrimination, as well as the selection principle of teacher models, Shufflenet_v2_x1.0 is selected as the student model, and Efficientnet_v2 is selected as the teacher model. Then, CrossEntropy Loss is replaced by Focal Loss. Finally, for Distillation Loss ratios of 0.6, 0.7, 0.8, 0.9, Soft Target Knowledge Distillation (ST), Masked Generative Distillation (MGD), Similarity-Preserving Knowledge Distillation (SPKD), and Attention Transfer (AT) four knowledge distillation methods are tested for their performance in distilling knowledge from the Shufflenet_v2_x1.0 model. The results show that the model discrimination performance after distillation is the best when the Distillation Loss ratio is 0.8 and the MGD method is used. This setup effectively improves the discrimination performance without increasing the number of parameters and computation volume. The model\'s P, R and F1 values reach 0.9208, 0.9190 and 0.9192, respectively. It achieves precise discrimination of the fermentation degree of black tea. This meets the requirements of objective black tea fermentation judgment and provides technical support for the intelligent processing of black tea.

BACKGROUND: Bladder cancer (BC) segmentation on MRI images is the first step to determining the presence of muscular invasion. This study aimed to assess the tumor segmentation performance of three deep learning (DL) models on multi-parametric MRI (mp-MRI) images.
METHODS: We studied 53 patients with bladder cancer. Bladder tumors were segmented on each slice of T2-weighted (T2WI), diffusion-weighted imaging/apparent diffusion coefficient (DWI/ADC), and T1-weighted contrast-enhanced (T1WI) images acquired at a 3Tesla MRI scanner. We trained Unet, MAnet, and PSPnet using three loss functions: cross-entropy (CE), dice similarity coefficient loss (DSC), and focal loss (FL). We evaluated the model performances using DSC, Hausdorff distance (HD), and expected calibration error (ECE).
RESULTS: The MAnet algorithm with the CE+DSC loss function gave the highest DSC values on the ADC, T2WI, and T1WI images. PSPnet with CE+DSC obtained the smallest HDs on the ADC, T2WI, and T1WI images. The segmentation accuracy overall was better on the ADC and T1WI than on the T2WI. The ECEs were the smallest for PSPnet with FL on the ADC images, while they were the smallest for MAnet with CE+DSC on the T2WI and T1WI.
CONCLUSIONS: Compared to Unet, MAnet and PSPnet with a hybrid CE+DSC loss function displayed better performances in BC segmentation depending on the choice of the evaluation metric.

As a traditional delicacy in China, preserved eggs inevitably experience instances of substandard quality during the production process. Chinese preserved egg production facilities can only rely on experienced workers to select the preserved eggs. However, the manual selection of preserved eggs presents challenges such as a low efficiency, subjective judgments, high costs, and hindered industrial production processes. In response to these challenges, this study procured the transmitted imagery of preserved eggs and refined the ConvNeXt network across four pivotal dimensions: the dimensionality reduction of model feature maps, the integration of multi-scale feature fusion (MSFF), the incorporation of a global attention mechanism (GAM) module, and the amalgamation of the cross-entropy loss function with focal loss. The resultant refined model, ConvNeXt_PEgg, attained proficiency in classifying and grading preserved eggs. Notably, the improved model achieved a classification accuracy of 92.6% across the five categories of preserved eggs, with a grading accuracy of 95.9% spanning three levels. Moreover, in contrast to its predecessor, the refined model witnessed a 24.5% reduction in the parameter volume, alongside a 3.2 percentage point augmentation in the classification accuracy and a 2.8 percentage point boost in the grading accuracy. Through meticulous comparative analysis, each enhancement exhibited varying degrees of performance elevation. Evidently, the refined model outshone a plethora of classical models, underscoring its efficacy in discerning the internal quality of preserved eggs. With its potential for real-world implementation, this technology portends to heighten the economic viability of manufacturing facilities.

BACKGROUND: Lysine crotonylation (Kcr) is a crucial protein post-translational modification found in histone and non-histone proteins. It plays a pivotal role in regulating diverse biological processes in both animals and plants, including gene transcription and replication, cell metabolism and differentiation, as well as photosynthesis. Despite the significance of Kcr, detection of Kcr sites through biological experiments is often time-consuming, expensive, and only a fraction of crotonylated peptides can be identified. This reality highlights the need for efficient and rapid prediction of Kcr sites through computational methods. Currently, several machine learning models exist for predicting Kcr sites in humans, yet models tailored for plants are rare. Furthermore, no downloadable Kcr site predictors or datasets have been developed specifically for plants. To address this gap, it is imperative to integrate existing Kcr sites detected in plant experiments and establish a dedicated computational model for plants.
RESULTS: Most plant Kcr sites are located on non-histones. In this study, we collected non-histone Kcr sites from five plants, including wheat, tabacum, rice, peanut, and papaya. We then conducted a comprehensive analysis of the amino acid distribution surrounding these sites. To develop a predictive model for plant non-histone Kcr sites, we combined a convolutional neural network (CNN), a bidirectional long short-term memory network (BiLSTM), and attention mechanism to build a deep learning model called PlantNh-Kcr. On both five-fold cross-validation and independent tests, PlantNh-Kcr outperformed multiple conventional machine learning models and other deep learning models. Furthermore, we conducted an analysis of species-specific effect on the PlantNh-Kcr model and found that a general model trained using data from multiple species outperforms species-specific models.
CONCLUSIONS: PlantNh-Kcr represents a valuable tool for predicting plant non-histone Kcr sites. We expect that this model will aid in addressing key challenges and tasks in the study of plant crotonylation sites.

Hyperspectral imaging is a key technology for non-destructive detection of seed vigor presently due to its capability to capture variations of optical properties in seeds. As the seed vigor data depends on the actual germination rate, it inevitably results in an imbalance between positive and negative samples. Additionally, hyperspectral image (HSI) suffers from feature redundancy and collinearity due to its inclusion of hundreds of wavelengths. It also creates a challenge to extract effective wavelength information in feature selection, however, which limits the ability of deep learning to extract features from HSI and accurately predict seed vigor. Accordingly, in this paper, we proposed a Focal-WAResNet network to predict seed vigor end-to-end, which improves the network performance and feature representation capability, and improves the accuracy of seed vigor prediction. Firstly, the focal loss function is utilized to adjust the loss weights of different sample categories to solve the problem of sample imbalance. Secondly, a WAResNet network is proposed to select characteristic wavelengths and predict seed vigor end-to-end, focusing on wavelengths with higher network weights, which enhance the ability of seed vigor prediction. To validate the effectiveness of this method, this study collected HSI of maize seeds for experimental verification, providing a reference for plant breeding. The experimental results demonstrate a significant improvement in classification performance compared to other state-of-the-art methods, with an accuracy up to 98.48% and an F1 score of 95.9%.

Protein contact map prediction is a critical and vital step in protein structure prediction, and its accuracy is highly contingent upon the feature representations of protein sequence information and the efficacy of deep learning models. In this paper, we propose an algorithm, DeepMSA+, to generate protein multiple sequence alignments (MSAs) and to construct feature representations based on co-evolutionary information and sequence information derived from MSAs. We also propose an improved deep learning model, AttCON, for training input features to predict protein contact map. The model incorporates an attention module, and by comparing different attention modules, we find a parameter-free attention module suitable for contact map prediction. Additionally, we use the Focal Loss function to better address the data imbalance issue in protein contact map. We also developed a weighted evaluation index (W score) for model evaluation, which takes into account a wide range of metrics. W score is comprehensive in its scope, with a particular focus on the precision of predictions for medium-range and long-range contacts. Experimental results show that AttCON achieves good precision results on datasets from CASP11 to CASP15. Compared to some state-of-the-art methods, it achieves an average improvement of over 5% in both medium-range and long-range predictions, and W score is improved by an average of 2 points.

Timely and accurate flame detection is a very important and practical technology for preventing the occurrence of fire accidents effectively. However, the current methods of flame detection are still faced with many challenges in video surveillance scenarios due to issues such as varying flame shapes, imbalanced samples, and interference from flame-like objects. In this work, a real-time flame detection method based on deformable object detection and time sequence analysis is proposed to address these issues. Firstly, based on the existing single-stage object detection network YOLOv5s, the network structure is improved by introducing deformable convolution to enhance the feature extraction ability for irregularly shaped flames. Secondly, the loss function is improved by using Focal Loss as the classification loss function to solve the problems of the imbalance of positive (flames) and negative (background) samples, as well as the imbalance of easy and hard samples, and by using EIOU Loss as the regression loss function to solve the problems of a slow convergence speed and inaccurate regression position in network training. Finally, a time sequence analysis strategy is adopted to comprehensively analyze the flame detection results of the current frame and historical frames in the surveillance video, alleviating false alarms caused by flame shape changes, flame occlusion, and flame-like interference. The experimental results indicate that the average precision (AP) and the F-Measure index of flame detection using the proposed method reach 93.0% and 89.6%, respectively, both of which are superior to the compared methods, and the detection speed is 24-26 FPS, meeting the real-time requirements of video flame detection.

Ensuring road safety, structural stability and durability is of paramount importance, and detecting road cracks plays a critical role in achieving these goals. We propose a GM-ResNet-based method to enhance the precision and efficacy of crack detection. Leveraging ResNet-34 as the foundational network for crack image feature extraction, we consider the challenge of insufficient global and local information assimilation within the model. To overcome this, we incorporate the global attention mechanism into the architecture, facilitating comprehensive feature extraction across the channel and the spatial width and height dimensions. This dynamic interaction across these dimensions optimizes feature representation and generalization, resulting in a more precise crack detection outcome. Recognizing the limitations of ResNet-34 in managing intricate data relationships, we replace its fully connected layer with a multilayer fully connected neural network. We fashion a deep network structure by integrating multiple linear, batch normalization and activation function layers. This construction amplifies feature expression, stabilizes training convergence and elevates the performance of the model in complex detection tasks. Moreover, tackling class imbalance is imperative in road crack detection. Introducing the focal loss function as the training loss addresses this challenge head-on, effectively mitigating the adverse impact of class imbalance on model performance. The experimental outcomes on a publicly available crack dataset emphasize the advantages of the GM-ResNet in crack detection accuracy compared to other methods. It is worth noting that the proposed method has better evaluation indicators in the detection results compared with alternative methodologies, highlighting its effectiveness. This validates the potency of our method in achieving optimal crack detection outcomes.

The efficient detection and counting of pig populations is critical for the promotion of intelligent breeding. Traditional methods for pig detection and counting mainly rely on manual labor, which is either time-consuming and inefficient or lacks sufficient detection accuracy. To address these issues, a novel model for pig detection and counting based on YOLOv5 enhanced with shuffle attention (SA) and Focal-CIoU (FC) is proposed in this paper, which we call YOLOv5-SA-FC. The SA attention module in this model enables multi-channel information fusion with almost no additional parameters, enhancing the richness and robustness of feature extraction. Furthermore, the Focal-CIoU localization loss helps to reduce the impact of sample imbalance on the detection results, improving the overall performance of the model. From the experimental results, the proposed YOLOv5-SA-FC model achieved a mean average precision (mAP) and count accuracy of 93.8% and 95.6%, outperforming other methods in terms of pig detection and counting by 10.2% and 15.8%, respectively. These findings verify the effectiveness of the proposed YOLOv5-SA-FC model for pig population detection and counting in the context of intelligent pig breeding.

UNASSIGNED: The identification and localization of tea picking points is a prerequisite for achieving automatic picking of famous tea. However, due to the similarity in color between tea buds and young leaves and old leaves, it is difficult for the human eye to accurately identify them.
UNASSIGNED: To address the problem of segmentation, detection, and localization of tea picking points in the complex environment of mechanical picking of famous tea, this paper proposes a new model called the MDY7-3PTB model, which combines the high-precision segmentation capability of DeepLabv3+ and the rapid detection capability of YOLOv7. This model achieves the process of segmentation first, followed by detection and finally localization of tea buds, resulting in accurate identification of the tea bud picking point. This model replaced the DeepLabv3+ feature extraction network with the more lightweight MobileNetV2 network to improve the model computation speed. In addition, multiple attention mechanisms (CBAM) were fused into the feature extraction and ASPP modules to further optimize model performance. Moreover, to address the problem of class imbalance in the dataset, the Focal Loss function was used to correct data imbalance and improve segmentation, detection, and positioning accuracy.
UNASSIGNED: The MDY7-3PTB model achieved a mean intersection over union (mIoU) of 86.61%, a mean pixel accuracy (mPA) of 93.01%, and a mean recall (mRecall) of 91.78% on the tea bud segmentation dataset, which performed better than usual segmentation models such as PSPNet, Unet, and DeeplabV3+. In terms of tea bud picking point recognition and positioning, the model achieved a mean average precision (mAP) of 93.52%, a weighted average of precision and recall (F1 score) of 93.17%, a precision of 97.27%, and a recall of 89.41%. This model showed significant improvements in all aspects compared to existing mainstream YOLO series detection models, with strong versatility and robustness. This method eliminates the influence of the background and directly detects the tea bud picking points with almost no missed detections, providing accurate two-dimensional coordinates for the tea bud picking points, with a positioning precision of 96.41%. This provides a strong theoretical basis for future tea bud picking.