equilibrium analysis

均衡分析
  • 文章类型: Journal Article
    宿主-寄生虫和捕食者-猎物相互作用的相互作用在生态动力学中至关重要,因为捕食者和寄生虫都可以调节群落。但是,当寄生虫通过考虑随机人口变化的营养相互作用传播时,受感染的猎物和捕食者的患病率是多少?这里,我们建模并分析了一个复杂的捕食者-猎物-寄生虫系统,寄生虫从猎物传播到捕食者。我们改变了寄生虫的毒力和感染概率,以研究这些进化因素如何决定物种“共存和种群”的组成。我们的结果表明,当任一宿主的感染概率较小时,寄生虫物种就会灭绝,成功感染最终宿主对于寄生虫的生存更为重要。虽然我们的随机模拟与确定性预测一致,随机性在共存和灭绝之间的边界区域中起着重要作用。不出所料,感染者的比例随着感染概率的增加而增加。有趣的是,感染和未感染个体的相对丰度在中间和最终宿主群体中可以具有相反的顺序。这种违反直觉的观察表明,直接和间接寄生虫效应的相互作用是复杂系统中感染流行的共同驱动因素。
    The interplay of host-parasite and predator-prey interactions is critical in ecological dynamics because both predators and parasites can regulate communities. But what is the prevalence of infected prey and predators when a parasite is transmitted through trophic interactions considering stochastic demographic changes? Here, we modelled and analysed a complex predator-prey-parasite system, where parasites are transmitted from prey to predators. We varied parasite virulence and infection probabilities to investigate how those evolutionary factors determine species\' coexistence and populations\' composition. Our results show that parasite species go extinct when the infection probabilities of either host are small and that success in infecting the final host is more critical for the survival of the parasite. While our stochastic simulations are consistent with deterministic predictions, stochasticity plays an important role in the border regions between coexistence and extinction. As expected, the proportion of infected individuals increases with the infection probabilities. Interestingly, the relative abundances of infected and uninfected individuals can have opposite orders in the intermediate and final host populations. This counterintuitive observation shows that the interplay of direct and indirect parasite effects is a common driver of the prevalence of infection in a complex system.
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  • 文章类型: Journal Article
    由严重急性呼吸道综合症冠状病毒2引起的Covid-19在2020年初爆发为大流行。这种疾病的迅速蔓延促使学术机构采取了前所未有的全球对策,监管机构,和工业。疫苗接种和包括社会距离在内的非药物干预已被证明是对抗大流行的最有效策略。在这种情况下,了解新冠肺炎传播的动态行为以及可能的疫苗接种策略是至关重要的。在这项研究中,提出了一种带有疫苗接种的易感感染-去除患病模型(SIRSi疫苗),考虑到未报告但具有传染性的。该模型考虑了感染或疫苗接种后暂时免疫的可能性。这两种情况都有助于疾病的传播。在疫苗接种率和隔离指数的参数空间中确定了无病平衡和地方性平衡的交替和互斥稳定性的跨临界分叉图。根据模型的流行病学参数确定了两个点的现有平衡条件。分叉图允许我们估计每组参数预期的最大确诊病例数。该模型与圣保罗的数据拟合,SP的州首府,巴西,它描述了所考虑的数据窗口的确认感染病例数和隔离指数。此外,模拟结果证明了易感人群的周期性无阻尼振荡行为的可能性,以及隔离指数中周期性小振幅振荡所强迫的确认病例数。所提出的模型的主要贡献如下:当疫苗接种与社会隔离相结合时,需要最小的努力,同时额外确保平衡点的存在。该模型可以为决策者提供有价值的信息,帮助定义将疫苗接种和非药物干预相结合的疾病预防缓解策略,比如社交距离和面具的使用。此外,SIRSi疫苗模型有助于对未报告的感染但感染病例的信息进行定性评估,在考虑临时豁免权时,疫苗接种,社会隔离指数。
    Covid-19, caused by severe acute respiratory syndrome coronavirus 2, broke out as a pandemic during the beginning of 2020. The rapid spread of the disease prompted an unprecedented global response involving academic institutions, regulatory agencies, and industries. Vaccination and nonpharmaceutical interventions including social distancing have proven to be the most effective strategies to combat the pandemic. In this context, it is crucial to understand the dynamic behavior of the Covid-19 spread together with possible vaccination strategies. In this study, a susceptible-infected-removed-sick model with vaccination (SIRSi-vaccine) was proposed, accounting for the unreported yet infectious. The model considered the possibility of temporary immunity following infection or vaccination. Both situations contribute toward the spread of diseases. The transcritical bifurcation diagram of alternating and mutually exclusive stabilities for both disease-free and endemic equilibria were determined in the parameter space of vaccination rate and isolation index. The existing equilibrium conditions for both points were determined in terms of the epidemiological parameters of the model. The bifurcation diagram allowed us to estimate the maximum number of confirmed cases expected for each set of parameters. The model was fitted with data from São Paulo, the state capital of SP, Brazil, which describes the number of confirmed infected cases and the isolation index for the considered data window. Furthermore, simulation results demonstrate the possibility of periodic undamped oscillatory behavior of the susceptible population and the number of confirmed cases forced by the periodic small-amplitude oscillations in the isolation index. The main contributions of the proposed model are as follows: A minimum effort was required when vaccination was combined with social isolation, while additionally ensuring the existence of equilibrium points. The model could provide valuable information for policymakers, helping define disease prevention mitigation strategies that combine vaccination and non-pharmaceutical interventions, such as social distancing and the use of masks. In addition, the SIRSi-vaccine model facilitated the qualitative assessment of information regarding the unreported infected yet infectious cases, while considering temporary immunity, vaccination, and social isolation index.
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  • 文章类型: Journal Article
    背景:肾素-血管紧张素-醛固酮系统在慢性肾病(CKD)猫中的作用尚未完全了解。
    目的:表征CKD猫肾内肾素-血管紧张素系统(RAS)的成分。
    方法:11只自然发生CKD的猫(CKD组)和8只健康对照猫。
    方法:通过逆转录聚合酶链反应评估肾组织样本中的肾素,血管紧张素原,血管紧张素转换酶(ACE),和血管紧张素II1型受体转录水平,并通过液相色谱-质谱法对血管紧张素I进行定量,II,III,和IV浓度。线性混合模型用于比较各组之间的基因转录水平和血管紧张肽的浓度。
    结果:与健康对照猫相比,CKD组的猫明显年龄较大(P<.001),并且更可能被绝育(P=.007)。与对照猫相比,患有CKD的猫的肾脏具有明显更高的血管紧张素原转录水平(P<.001)和更低的ACE转录水平(P<.001)。与对照肾脏相比,CKD中的肾脏血管紧张素I浓度增加(P=0.001)。两组之间肾脏转录水平或血管紧张肽浓度没有其他显着差异。
    结论:CKD猫肾内RAS可能被激活。小样本量和年龄差异,中性状态,两组之间的饮食钠摄入量可能限制了确定肾脏血管紧张素II浓度显着差异的能力。
    BACKGROUND: The role of the renin-angiotensin-aldosterone system in cats with chronic kidney disease (CKD) is incompletely understood.
    OBJECTIVE: To characterize components of the intrarenal renin-angiotensin system (RAS) in cats with CKD.
    METHODS: Eleven cats with naturally occurring CKD (CKD group) and 8 healthy control cats.
    METHODS: Renal tissue samples were evaluated by reverse-transcription polymerase chain reaction for renin, angiotensinogen, angiotensin-converting enzyme (ACE), and angiotensin II type 1 receptor transcript levels, and by liquid chromatography-mass spectrometry for quantification of angiotensin I, II, III, and IV concentrations. Linear mixed models were used to compare gene transcript levels and concentrations of angiotensin peptides between groups.
    RESULTS: Cats of the CKD group were significantly older (P < .001) and more likely to be neutered (P = .007) than healthy control cats. Kidneys from cats with CKD had significantly higher transcript levels of angiotensinogen (P < .001) and lower transcript levels of ACE (P < .001) than those from control cats. Renal angiotensin I concentrations were increased in CKD compared with control kidneys (P = .001). No other significant differences in renal transcript levels or angiotensin peptide concentrations were noted between groups.
    CONCLUSIONS: The intrarenal RAS might be activated in cats with CKD. Small sample size and differences in age, neuter status, and dietary sodium intake between groups might have limited the ability to identify a significant difference in concentration of renal angiotensin II.
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  • 文章类型: Journal Article
    通常使用的元件扭转刚度GJ/L(其中G是剪切模量,J圣维南扭转常数,和L元素长度)可能严重低估薄壁纳米结构构件的扭转刚度,由于忽略了元素翘曲变形。为了研究考虑翘曲变形的精确单元扭转刚度,本文提出了一种用于梁柱扭转和翘曲分析的矩阵刚度法。进行了轴向受载扭转构件的平衡分析,基于已建立的扭转角控制微分方程的一般解,解决了扭转翘曲问题。定义了无量纲因子以考虑轴向力和圣维南扭转的影响。基于矩阵公式,得出了精确的单元刚度矩阵,该矩阵决定了单元端扭转/翘曲变形(角度和扭转率)与相应的应力结果(扭矩和双模)之间的关系。基于矩阵刚度法,在三种典型的单元端翘曲条件下,推导了考虑扭转和翘曲相互作用的精确单元扭转刚度。然后,进一步组装了三维梁柱的精确单元二阶刚度矩阵。分析了一些经典的扭转翘曲问题,以证明所建立的矩阵刚度方法。
    The typically-used element torsional stiffness GJ/L (where G is the shear modulus, J the St. Venant torsion constant, and L the element length) may severely underestimate the torsional stiffness of thin-walled nanostructural members, due to neglecting element warping deformations. In order to investigate the exact element torsional stiffness considering warping deformations, this paper presents a matrix stiffness method for the torsion and warping analysis of beam-columns. The equilibrium analysis of an axial-loaded torsion member is conducted, and the torsion-warping problem is solved based on a general solution of the established governing differential equation for the angle of twist. A dimensionless factor is defined to consider the effect of axial force and St. Venant torsion. The exact element stiffness matrix governing the relationship between the element-end torsion/warping deformations (angle and rate of twist) and the corresponding stress resultants (torque and bimoment) is derived based on a matrix formulation. Based on the matrix stiffness method, the exact element torsional stiffness considering the interaction of torsion and warping is derived for three typical element-end warping conditions. Then, the exact element second-order stiffness matrix of three-dimensional beam-columns is further assembled. Some classical torsion-warping problems are analyzed to demonstrate the established matrix stiffness method.
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  • 文章类型: Journal Article
    We present a new mathematical model to investigate the spatial spread of an infectious disease. The model consists of a nonlinear PDE system with an unknown velocity field, defined on an epidemic domain that changes with time. The moving boundary of the domain represents the wavefront of the epidemic. We conduct an equilibrium analysis to the simplified models represented by ODE systems. We also perform a numerical study on the original PDE system for a range of scenarios, including one under a realistic epidemic setting.
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  • 文章类型: Journal Article
    过去40年的快速工业化和缺乏技术创新,造成了严重的环境污染和资源浪费。因此,协调技术创新仍然是一项紧迫的挑战,资源消耗,环境质量,中国工业高质量发展。利用陕西省2005-2019年的数据,我们采用4群灰色Lotka-Volterra模型(GLV)来研究技术创新(TI)之间的竞争与合作,资源消耗(RE),环境质量(EE),和产业发展质量(IQ)。我们还研讨了GLV模子的均衡点和稳固性,并进一步验证了其准确性。我们对陕西省的数据进行了实证研究,结果表明:(1)TI能够提高EE,提高智商,促进可再生能源;(2)节约资源对TI有积极影响,EE,和智商;(3)虽然EE可以阻止TI和智商,它可以降低RE;(4)智商可以有效降低RE,提高EE;然而,它阻碍了TI。(5)均衡分析的结果表明,未来四个因素的演化将趋于达到一个稳定的均衡点,也就是说,实现共同进化。
    The rapid industrialization and the lack of technological innovation over the past 40 years have caused serious environmental pollution and waste of resources. Therefore, it remains an urgent challenge to coordinate technological innovation, resource consumption, environmental quality, and high-quality industrial development in China. Using the data of Shaanxi Province from 2005 to 2019, in this paper, we adopt the 4-population grey Lotka-Volterra model (GLV) to study the competition and cooperation among technological innovation (TI), resource consumption (RE), environmental quality (EE), and industrial development quality (IQ). We also discuss the equilibrium point and stability of the GLV model and further verify its accuracy. We conduct an empirical study of the data of Shaanxi Province, and the results demonstrate that (1) TI is able to improve EE, increase IQ, and promote RE; (2) conserving resources has a positive effect on TI, EE, and IQ; (3) although EE could prevent TI and IQ, it can reduce RE; and (4) IQ can effectively reduce RE and improve EE; however, it hinders TI. (5) The result of equilibrium analysis reveals that the evolution of the four factors will tend to reach a stable equilibrium point in the future, that is, realizing co-evolution.
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  • 文章类型: Journal Article
    2019年冠状病毒病(Covid-19)的爆发导致世界陷入前所未有的健康和经济危机。为了应对这种紧急情况,世界各地的研究人员正在深入研究新冠肺炎大流行的动态。在这项研究中,提出了一种易感-感染-去除-患病(SIRSi)隔室模型,这是对经典的Susceptible-infected-Removed(SIR)模型的修改。所提出的模型考虑了未报告或无症状病例的可能性,以及人群中免疫力的差异,即,获得性免疫可能是暂时的,这发生在采用除零之外的参数(γ)之一时。证明了该模型的局部渐近稳定性和特有平衡条件。该模型根据巴西圣保罗州三个主要城市的数据进行了调整,即,圣保罗,桑托斯,和坎皮纳斯,提供与疾病传播相关的持续时间和峰值的估计。这项研究表明,暂时免疫力有利于第二波感染,这取决于康复者再次易感的时间间隔。它还表明,更多的患者可能会感染,而再感染的时间会减少。
    The coronavirus disease 2019 (Covid-19) outbreak led the world to an unprecedented health and economic crisis. In an attempt to respond to this emergency, researchers worldwide are intensively studying the dynamics of the Covid-19 pandemic. In this study, a Susceptible - Infected - Removed - Sick (SIRSi) compartmental model is proposed, which is a modification of the classical Susceptible - Infected - Removed (SIR) model. The proposed model considers the possibility of unreported or asymptomatic cases, and differences in the immunity within a population, i.e., the possibility that the acquired immunity may be temporary, which occurs when adopting one of the parameters ( γ ) other than zero. Local asymptotic stability and endemic equilibrium conditions are proved for the proposed model. The model is adjusted to the data from three major cities of the state of São Paulo in Brazil, namely, São Paulo, Santos, and Campinas, providing estimations of duration and peaks related to the disease propagation. This study reveals that temporary immunity favors a second wave of infection and it depends on the time interval for a recovered person to be susceptible again. It also indicates the possibility that a greater number of patients would get infected with decreased time for reinfection.
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  • 文章类型: Journal Article
    Simultaneous random access of massive machine type communications (MTC) devices are expected to cause congestion in the radio access network. Not only the performance of MTC, but the coexisting human to human (H2H) communications would also degrade dramatically without an appropriate medium access control (MAC) protocol. However, most existing solutions focus on the random access procedure without dealing with the sunsequent data transmission procedure. In this paper, we firstly derive a packet size threshold based on the capacity analysis of slotted ALOHA (S-ALOHA) and time division multiple access (TDMA) protocols. Then a novel hybrid S-ALOHA/TDMA MAC protocol (HSTMAC) is presented for massive MTC access, in which the resources are separated for beta distributed machine to machine (M2M) traffic with small size packets and high priority H2H traffic with large size packets. Considering access class barring (ACB) scheme as an overload control method, the system equilibrium under arbitrary retransmission limit is analyzed rigorously, which can provide insights on quality of service (QoS) guarantee. Finally, a dynamic pre-backoff (DPBO) algorithm is designed for load balance by adaptively scattering the highly synchronized M2M traffic over the transmission interval. Numerical and simulation results validate our analysis and show that the HSTMAC protocol is superior to pure S-ALOHA protocol and pure TDMA protocol. The proposed DPBO algorithm can achieve a higher success probability and resource utilization ratio with a much reduced average delay than that of uniform pre-backoff (UPBO) scheme.
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  • 文章类型: Comparative Study
    Proper design of nucleic acid sequences is crucial for many applications. We have previously established a thermodynamics-based quantitative model to help design aptamer-based nucleic acid probes by predicting equilibrium concentrations of all interacting species. To facilitate customization of this thermodynamic model for different applications, here we present a generic and easy-to-use platform to implement the algorithm of the model with Microsoft(®) Excel formulas and VBA (Visual Basic for Applications) macros. Two Excel spreadsheets have been developed: one for the applications involving only nucleic acid species, the other for the applications involving both nucleic acid and non-nucleic acid species. The spreadsheets take the nucleic acid sequences and the initial concentrations of all species as input, guide the user to retrieve the necessary thermodynamic constants, and finally calculate equilibrium concentrations for all species in various bound and unbound conformations. The validity of both spreadsheets has been verified by comparing the modeling results with the experimental results on nucleic acid sequences reported in the literature. This Excel-based platform described here will allow biomedical researchers to rationalize the sequence design of nucleic acid probes using the thermodynamics-based modeling even without relevant theoretical and computational skills.
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  • 文章类型: Journal Article
    Argulus foliaceus is a macroparasite which can have a significant impact on yield in recreational trout fisheries, partly by increasing fish mortalities but also by reducing the appetite of infected fish, making them less likely to respond to bait. The aim of this paper is to determine the impact of four commonly used fish stocking methods both on the parasite dynamics, and on fisheries\' yields. The wider consequences of the resultant reduction in host feeding are also of interest. To this end four different stocking methods were incorporated into Anderson and May\'s macroparasite model, which comprises three differential equations representing the host, attached parasite and free-living parasite populations. To each of these a reduction in the fish capture rate, inversely linked to the mean parasite burden, is added and the effects interpreted. Results show that (1) the common practise of increasing the stocking rate as catches drop may be counterproductive; (2) in the absence of any wild population of reservoir hosts, the parasite will be unable to survive if the stocking rate does not exceed the rate of capture; (3) compensatory stocking to account for fish mortalities can have disastrous consequences on yield; and (4) the parasite can, under certain circumstances, maintain the host population by preventing their capture.
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