enzymatic secretome

  • 文章类型: Journal Article
    苯氧基自由基偶联反应在自然界中广泛用于合成复杂分子如木质素。它们在实验室中的使用对于从多酚家族生产高价值化合物具有巨大的潜力。虽然负责产生自由基的酶是众所周知的,后者的行为仍然是神秘的,难以在反应烧瓶中控制。在我们的实验室中使用含有漆酶的B.cinerea酶促分泌组的先前工作表明,二苯乙烯的孵育会导致二聚体,而苯基丙烷类的孵育会导致二聚体以及更大的偶联产物。在这些先前研究的基础上,本文研究了不同结构特征在苯氧基自由基偶联中的作用。我们首先证明了环外共轭双键的存在在产生有效反应中起作用。此外,我们表明,苯丙素类三聚体和四聚体的形成可以通过脱羧反应再生该反应性部分进行。最后,这项研究调查了其他酚类化合物的反应性:二苯乙烯二聚体,一种二氢二苯乙烯,一种4-O-甲基-二苯乙烯和一种具有灰霉病菌酶促分泌组的简单酚。观察到的有效二聚反应始终与共轭到环外双键的对酚的存在相关。缺乏这种结构特征会导致不同的结果,一些化合物显示低转化率或根本没有反应。这项研究允许开发一种可控的方法来合成苯丙素衍生物和新型二苯乙烯衍生物的特定二聚体和四聚体,以及对可以促进有效自由基偶联反应的特征的理解。
    Phenoxy radical coupling reactions are widely used in nature for the synthesis of complex molecules such as lignin. Their use in the laboratory has great potential for the production of high value compounds from the polyphenol family. While the enzymes responsible for the generation of the radicals are well known, the behavior of the latter is still enigmatic and difficult to control in a reaction flask. Previous work in our laboratory using the enzymatic secretome of B. cinerea containing laccases has shown that incubation of stilbenes leads to dimers, while incubation of phenylpropanoids leads to dimers as well as larger coupling products. Building on these previous studies, this paper investigates the role of different structural features in phenoxy radical couplings. We first demonstrate that the presence of an exocyclic conjugated double bond plays a role in the generation of efficient reactions. In addition, we show that the formation of phenylpropanoid trimers and tetramers can proceed via a decarboxylation reaction that regenerates this reactive moiety. Lastly, this study investigates the reactivity of other phenolic compounds: stilbene dimers, a dihydro-stilbene, a 4-O-methyl-stilbene and a simple phenol with the enzymatic secretome of B. cinerea. The observed efficient dimerization reactions consistently correlate with the presence of a para-phenol conjugated to an exocyclic double bond. The absence of this structural feature leads to variable results, with some compounds showing low conversion or no reaction at all. This research has allowed the development of a controlled method for the synthesis of specific dimers and tetramers of phenylpropanoid derivatives and novel stilbene derivatives, as well as an understanding of features that can promote efficient radical coupling reactions.
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  • 文章类型: Journal Article
    Wnt信号通路在多细胞动物胚胎发育过程中控制多个事件,并且在成人中异常激活时致癌。乳腺癌和三阴性乳腺癌(TNBC)特别依赖于Wnt通路过度激活。尽管有这种重要性,目前尚无Wnt通路靶向药物,这需要新的方法来寻找靶向该致癌途径的治疗相关化合物。己烯类似物代表了治疗性天然产物研究的未开发领域。在目前的工作中,使用灰葡萄孢的酶促分泌组,通过白藜芦醇和蝶芪的混合物的生物转化获得了复杂的二苯乙烯衍生物文库。为了改善化学多样性,使用i-PrOH进行反应,n-BuOH,I-BuOH,EtOH,或MeOH作为共溶剂。使用这个策略,产生了一系列分布在6个支架中的73个不寻常的衍生物;55个衍生物代表新化合物。通过核磁共振和高分辨率质谱法确定分离的每种化合物的结构。对分离的化合物对致癌Wnt途径的抑制活性进行了全面定量,并与它们抑制癌细胞生长的能力相关。从而深入了解衍生物的结构-活性关系。最后,我们已经解剖了该途径中二苯乙烯衍生物活性的机制细节。
    The Wnt signaling pathway controls multiple events during embryonic development of multicellular animals and is carcinogenic when aberrantly activated in adults. Breast cancer and triple-negative breast cancer (TNBC) in particular depend upon Wnt pathway overactivation. Despite this importance, no Wnt pathway-targeting drugs are currently available, which necessitates novel approaches to search for therapeutically relevant compounds targeting this oncogenic pathway. Stilbene analogs represent an under-explored field of therapeutic natural products research. In the present work, a library of complex stilbene derivatives was obtained through biotransformation of a mixture of resveratrol and pterostilbene using the enzymatic secretome of Botrytis cinerea. To improve the chemodiversity, the reactions were performed using i-PrOH, n-BuOH, i-BuOH, EtOH, or MeOH as cosolvents. Using this strategy, a series of 73 unusual derivatives was generated distributed among 6 scaffolds; 55 derivatives represent novel compounds. The structure of each compound isolated was determined by nuclear magnetic resonance and high-resolution mass spectrometry. The inhibitory activity of the isolated compounds against the oncogenic Wnt pathway was comprehensively quantified and correlated with their capacity to inhibit the growth of the cancer cells, leading to insights into structure-activity relationships of the derivatives. Finally, we have dissected mechanistic details of the stilbene derivatives activity within the pathway.
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  • 文章类型: Journal Article
    在这项研究中,通过对阿魏酸的化学酶生物转化,获得了一系列复杂的苯丙素衍生物,咖啡酸,以及两种酸的混合物,使用灰葡萄孢菌的酶促分泌体。这些底物与真菌酶一起孵育,并使用最先进的分析方法监测反应。在这样的条件下,一系列二聚体,三聚体,并产生四聚体。对反应进行优化和放大。将所得混合物通过高分辨率半制备型HPLC与干负载引入结合纯化。这种方法产生了一系列23个苯丙烷类衍生物,其中11个是第一次描述。这些化合物分为12个二聚体,9个三聚体(包括一个全新的结构支架),和2个四聚体。用经典的光谱方法如NMR和HRESIMS分析进行其结构的阐明。分析所得化合物系列在TNBC细胞中的抗Wnt活性,几种衍生物表现出特异性抑制作用。
    In this study, a series of complex phenylpropanoid derivatives were obtained by chemoenzymatic biotransformation of ferulic acid, caffeic acid, and a mixture of both acids using the enzymatic secretome of Botrytis cinerea. These substrates were incubated with fungal enzymes, and the reactions were monitored using state-of-the-art analytical methods. Under such conditions, a series of dimers, trimers, and tetramers were generated. The reactions were optimized and scaled up. The resulting mixtures were purified by high-resolution semi-preparative HPLC combined with dry load introduction. This approach generated a series of 23 phenylpropanoid derivatives, 11 of which are described here for the first time. These compounds are divided into 12 dimers, 9 trimers (including a completely new structural scaffold), and 2 tetramers. Elucidation of their structures was performed with classical spectroscopic methods such as NMR and HRESIMS analyses. The resulting compound series were analyzed for anti-Wnt activity in TNBC cells, with several derivatives demonstrating specific inhibition.
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