environmental adaptations

环境适应
  • 文章类型: Journal Article
    锌离子电池(ZIB)作为一种有前途的储能器件,因其具有较高的安全性而备受关注,低成本,高容量,和集成的智能功能。在这里,智能反应的工作原理,智能自充电,对智能电致变色以及智能集成电池进行了概述。因此,这篇综述可以激发研究人员设计新型功能电池器件,以扩展其应用前景。此外,从智能化设计的角度,全面收集和讨论了与智能ZIB性能相关的关键因素。提供了将阴极材料和电解质的设计原理与电极界面相关联的深刻理解。为了解决当前具有挑战性的问题和智能ZIB系统的发展,最后展望了关于集成电池系统的各种新兴策略。
    The zinc ion battery (ZIB) as a promising energy storage device has attracted great attention due to its high safety, low cost, high capacity, and the integrated smart functions. Herein, the working principles of smart responses, smart self-charging, smart electrochromic as well as smart integration of the battery are summarized. Thus, this review enables to inspire researchers to design the novel functional battery devices for extending their application prospects. In addition, the critical factors associated with the performance of the smart ZIBs are comprehensively collected and discussed from the viewpoint of the intellectualized design. A profound understanding for correlating the design philosophy in cathode materials and electrolytes with the electrode interface is provided. To address the current challenging issues and the development of smart ZIB systems, a wide variety of emerging strategies regarding the integrated battery system is finally prospected.
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  • 文章类型: Journal Article
    花的颜色多样性是凤眼莲属植物的重要分类性状,增强它们作为观赏花卉的吸引力。然而,对仙人掌花色形成的分子机制的了解仍然有限。M.威尔逊亚科。澳大利亚(澳大利亚)和威尔逊亚种。东方(Orientalis)具有呈现红紫色花朵的发育阶段,虽然东方在盛开时期也呈现蓝色,使其成为探索M.wilsonii蓝花形成机制的重要模型。在这项研究中,我们收集了不同发育阶段的南方和东方的花瓣,以比较两种物种之间的着色差异,并检测东方的蓝色分子机制。我们发现花青素是两种植物花的主要花青素,东方的蓝色主要来自花青素(花青素-3-O-sambubioside)。进行RNA测序分析以检测花青素生物合成途径中的基因表达,结果表明,花色苷生物合成的基因调控可能不是东方草蓝色形成的直接原因。此外,东方的生长固体富含Fe和Mg离子,和大量的铁和镁离子积累在东方的花瓣。结合基因功能富集结果,我们发现这两个物种的紫色和红紫色是由花青素的不同糖基化水平呈现的,而东方白杨的紫色可能是金属花青素被Fe和Mg离子引起的结果,这也减轻了其细胞中铁和镁离子含量高引起的毒性。环境适应相关基因在两个物种中均高表达,例如适应干燥,缺水,冻结,等。我们的结果揭示了Australis和Orientalis之间的着色差异,并描述了Orientalis中蓝色着色的分子机制。我们分析中的数据可以丰富M.wilsonii的遗传资源,以供进一步研究。
    Flower color diversity is a key taxonomic trait in Meconopsis species, enhancing their appeal as ornamental flowers. However, knowledge of the molecular mechanisms of flower color formation in Meconopsis species is still limited. M. wilsonii subsp. australis (Australis) and M. wilsonii subsp. orientalis (Orientalis) have a developmental stage presenting red-purple flowers, while Orientalis also presents blue coloration at the full-bloom period, making them an important model for exploring the mechanism of blue flower formation in M. wilsonii. In this study, we collected petals from Australis and Orientalis at different developmental stages to compare the coloration differences between the two species and detect the molecular mechanisms of blue color in Orientalis. We identified that cyanidin was the main anthocyanin in the flowers of both species, and the blue color in Orientalis primarily arises from anthocyanins (Cyanidin-3-O-sambubioside). RNA sequencing analysis was performed to detect the gene expression in the anthocyanin biosynthesis pathway, and the results suggested that gene regulation for anthocyanin biosynthesis may not be the direct reason for blue color formation in Orientalis. In addition, the growth solid of Orientalis was rich in Fe and Mg ions, and a large amount of Fe and Mg ions accumulated in the petals of Orientalis. Combined with the gene functional enrichment results, we found that the purple and red-purple colors of these two species were presented by different glycosylation levels of cyanidin, while the violet color of Orientalis might be the results of metalloanthocyanins by Fe and Mg ions, which also relieved the toxicity caused by the high content of Fe and Mg ions in its cells. The environmental adaptation-related genes were highly expressed of in both species, such as adaptation to desiccation, water deprivation, freezing, etc. Our results revealed the coloration differences between Australis and Orientalis and described the molecular mechanisms of blue coloration in Orientalis. The data in our analysis could enrich the genetic resources for M. wilsonii for further studies.
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  • 文章类型: Journal Article
    鲶鱼养殖中两种常见的细菌性疾病是鲶鱼的肠败血症和由小爱德华氏杆菌和牛黄杆菌引起的小柱病。分别。这些细菌病原体的慢性和反复爆发每年导致生产者的重大经济损失。确定这些病原体是否可以在商业池塘的沉积物中持续存在至关重要。进行了实验性持久性试验(PT),以评估池塘沉积物中E.ictaluri和F.covae的持久性。将含有来自四个商业cat鱼池的120克灭菌沉淀物的12个测试室接种伊氏大肠杆菌(S97-773)或F.covae(ALG-00-530),并填充8升消毒水。在1,2,4-,6-,8-,接种后15天,去除1克沉积物,使用6×6滴板方法在选择性培养基上计数菌落形成单位(CFU)。伊氏大肠杆菌种群在第3天在6.4±0.5log10CFUg-1达到峰值。相关分析显示,沉积物理化参数与伊氏大肠杆菌log10CFUg-1之间没有相关性。然而,两次PT尝试后,没有活的F.covae菌落恢复。未来的研究,以提高对E.ictaluri发病机制和持久性的理解,并且需要在池塘底部沉积物中潜在的F.covae持久性。
    Two prevalent bacterial diseases in catfish aquaculture are enteric septicemia of catfish and columnaris disease caused by Edwardsiella ictaluri and Flavobacterium covae, respectively. Chronic and recurring outbreaks of these bacterial pathogens result in significant economic losses for producers annually. Determining if these pathogens can persist within sediments of commercial ponds is paramount. Experimental persistence trials (PT) were conducted to evaluate the persistence of E. ictaluri and F. covae in pond sediments. Twelve test chambers containing 120 g of sterilized sediment from four commercial catfish ponds were inoculated with either E. ictaluri (S97-773) or F. covae (ALG-00-530) and filled with 8 L of disinfected water. At 1, 2, 4-, 6-, 8-, and 15-days post-inoculation, 1 g of sediment was removed, and colony-forming units (CFU) were enumerated on selective media using 6 × 6 drop plate methods. E. ictaluri population peaked on Day 3 at 6.4 ± 0.5 log10 CFU g-1. Correlation analysis revealed no correlation between the sediment physicochemical parameters and E. ictaluri log10 CFU g-1. However, no viable F. covae colonies were recovered after two PT attempts. Future studies to improve understanding of E. ictaluri pathogenesis and persistence, and potential F. covae persistence in pond bottom sediments are needed.
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  • 文章类型: Journal Article
    反刍动物需要不断适应环境变化,以使它们适应不同的生态位和摄食习惯。此外,反刍动物消化系统的形态和功能揭示了一些适应性进化特征。蓝羊(Pseudoisnayaur)表现出放牧者典型的各种形态生理适应。在这项研究中,我们从贺兰山收集了64个成年蓝羊样本(整个动物尸体),中国,在不同的季节。外部形态参数,消化系统形态学指标,并测定瘤胃表面膨大因子。我们的结果表明,瘤胃和网重与体重呈正相关(p=0.004),而食物通道孔,肠道长度,不同季节(p>0.05)和性别(p>0.05)之间,蓝羊消化道重量没有显着差异。密度有显著差异(p<0.001),长度,和乳突的宽度,瘤胃表面扩大因子为2.85±1.37,是粗饲料饲养者的典型特征。蓝羊的营养和生态特征代表了对草食性饮食的明显形态和生理适应。采取快速觅食策略,使蓝羊能够快速消耗和排泄大量饲料,从而获得他们活动所需的能量,并促进更好地适应环境变化。
    Constant adaptation to environmental changes is required by ruminants to allow them to adapt to different ecological niches and feeding habits. In addition, the morphology and function of ruminant digestive systems reveal some adaptive evolutionary characteristics. Blue sheep (Pseudois nayaur) display a variety of morpho-physiological adaptations that are typical of grazers. In this study, we collected 64 adult blue sheep samples (whole animal carcasses) from the Helan Mountains, China, during different seasons. The external morphological parameters, digestive system morphological indexes, and rumen surface enlargement factors were determined. Our results reveal that the rumen and reticulum weights were positively correlated with the body weight (p = 0.004), while the food channel aperture, intestinal length, and weight of the blue sheep digestive tract presented no significant differences between different seasons (p > 0.05) and sexes (p > 0.05). There were significant differences (p < 0.001) in the density, length, and width of mastoids, and the rumen surface enlargement factor was 2.85 ± 1.37, which is typical of roughage feeders. The nutritional and ecological characteristics of blue sheep represent obvious morphological and physiological adaptations to an herbivorous diet. Adopting a quick foraging strategy allows blue sheep to rapidly consume and excrete large amounts of feed, thus obtaining the required energy for their activities and facilitating better adaption to environmental changes.
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  • 文章类型: Systematic Review
    适应性进化是一种过程,在这种过程中,在特定的环境背景下赋予进化优势的变异出现并通过种群传播。在调查这个过程时,研究人员主要集中在描述有利的表型或假定的有利基因型。最近分子数据可及性和技术进步的增加使研究人员能够超越描述,并对适应性进化的潜在机制做出推论。在这次系统审查中,我们讨论了2016年至2022年的文章,这些文章研究或回顾了脊椎动物响应环境变化的适应性进化的分子机制。基因组中的调控元件和参与基因表达或细胞途径的调控蛋白已被证明在响应大多数讨论的环境因素的适应性进化中起关键作用。在某些情况下,基因丢失被认为与适应性反应有关。未来的适应性进化研究可能会受益于更多针对基因组非编码区的研究,基因调控机制,和基因丢失可能产生有利的表型。研究新的有利基因型如何保守也可能有助于我们对适应性进化的了解。
    Adaptive evolution is a process in which variation that confers an evolutionary advantage in a specific environmental context arises and is propagated through a population. When investigating this process, researchers have mainly focused on describing advantageous phenotypes or putative advantageous genotypes. A recent increase in molecular data accessibility and technological advances has allowed researchers to go beyond description and to make inferences about the mechanisms underlying adaptive evolution. In this systematic review, we discuss articles from 2016 to 2022 that investigated or reviewed the molecular mechanisms underlying adaptive evolution in vertebrates in response to environmental variation. Regulatory elements within the genome and regulatory proteins involved in either gene expression or cellular pathways have been shown to play key roles in adaptive evolution in response to most of the discussed environmental factors. Gene losses were suggested to be associated with an adaptive response in some contexts. Future adaptive evolution research could benefit from more investigations focused on noncoding regions of the genome, gene regulation mechanisms, and gene losses potentially yielding advantageous phenotypes. Investigating how novel advantageous genotypes are conserved could also contribute to our knowledge of adaptive evolution.
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  • 文章类型: Journal Article
    DNA甲基化是基因组的表观遗传修饰,参与基因表达的调节和染色质结构的调节。植物基因组广泛甲基化,甲基化通常通过称为DNA甲基转移酶的特定酶的活性发生在胞嘧啶碱基上。另一方面,甲基化的DNA也可以通过去甲基酶的作用进行去甲基化。甲基化景观经过微调,并在植物发育和进化中发挥关键作用。这篇综述说明了DNA甲基化的不同分子方面以及受模型物种这种表观遗传修饰影响的一些植物生理过程。农作物,和观赏植物如兰花。此外,本文旨在描述植物DNA甲基化水平的变化与生物和非生物胁迫反应之间的关系。最后,我们讨论了DNA甲基化可能的进化意义和生物技术应用。
    DNA methylation is an epigenetic modification of the genome involved in the regulation of gene expression and modulation of chromatin structure. Plant genomes are widely methylated, and the methylation generally occurs on the cytosine bases through the activity of specific enzymes called DNA methyltransferases. On the other hand, methylated DNA can also undergo demethylation through the action of demethylases. The methylation landscape is finely tuned and assumes a pivotal role in plant development and evolution. This review illustrates different molecular aspects of DNA methylation and some plant physiological processes influenced by this epigenetic modification in model species, crops, and ornamental plants such as orchids. In addition, this review aims to describe the relationship between the changes in plant DNA methylation levels and the response to biotic and abiotic stress. Finally, we discuss the possible evolutionary implications and biotechnological applications of DNA methylation.
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  • 文章类型: Journal Article
    亚马逊是世界上所有淡水鱼物种的15%(>2700,按18个顺序)的家园,许多是该地区特有的,有6500万年的进化历史,占排放到海洋的淡水总量的20%。这些特点使亚马逊成为世界上一个独特的地区。我们回顾了环境的地质历史,它目前的生物地球化学和进化力量导致了目前特有的鱼类物种分布在三种非常不同的水类型中:黑水[酸性,离子差,富含溶解有机碳(DOC)],白色水域(环绕,富含颗粒的)和清澈的水域(环绕中性,离子差,DOC-poor)。每年的洪水脉冲是鱼类的主要生态驱动力,提供喂养,繁殖和迁徙机会,并深刻影响O2、CO2和DOC制度。由于气候变化和其他人为压力,如森林砍伐,污染和政府管理不善,亚马逊现在正处于危机之中。环境变得越来越干燥,现在正在发生更强烈和更频繁的洪水脉冲,高水位和低水位之间的差异更大。目前的预测是,亚马逊水域在不久的将来会更热,酸性更强,更暗(即更多的DOC,更多的悬浮颗粒),更高的离子,CO2含量较高,O2含量较低,具有许多协同作用。我们回顾了亚马逊鱼的当前生理信息,专注于处理酸性和贫离子环境的温度耐受性和离子调节策略。我们还讨论了DOC和粒子对ill功能的影响,高溶解CO2和低溶解O2的影响,重点是水与空气呼吸机制,和pH补偿策略。我们得出结论,未来水温升高将是最关键的因素,消灭许多物种。气候变化可能会有利于常规代谢率低的主要呼吸水的物种,常规代谢率的低温敏感性,高厌氧能力,耐缺氧能力高,耐热性高。
    Amazonia is home to 15% (>2700, in 18 orders) of all the freshwater fish species of the world, many endemic to the region, has 65 million years of evolutionary history and accounts for 20% of all freshwater discharge to the oceans. These characteristics make Amazonia a unique region in the world. We review the geological history of the environment, its current biogeochemistry and the evolutionary forces that led to the present endemic fish species that are distributed amongst three very different water types: black waters [acidic, ion-poor, rich in dissolved organic carbon (DOC)], white waters (circumneutral, particle-rich) and clear waters (circumneutral, ion-poor, DOC-poor). The annual flood pulse is the major ecological driver for fish, providing feeding, breeding and migration opportunities, and profoundly affecting O2, CO2 and DOC regimes. Owing to climate change and other anthropogenic pressures such as deforestation, pollution and governmental mismanagement, Amazonia is now in crisis. The environment is becoming hotter and drier, and more intense and frequent flood pulses are now occurring, with greater variation between high and low water levels. Current projections are that Amazon waters of the near future will be even hotter, more acidic, darker (i.e. more DOC, more suspended particles), higher in ions, higher in CO2 and lower in O2, with many synergistic effects. We review current physiological information on Amazon fish, focusing on temperature tolerance and ionoregulatory strategies for dealing with acidic and ion-poor environments. We also discuss the influences of DOC and particles on gill function, the effects of high dissolved CO2 and low dissolved O2, with emphasis on water- versus air-breathing mechanisms, and strategies for pH compensation. We conclude that future elevations in water temperature will be the most critical factor, eliminating many species. Climate change will likely favour predominantly water-breathing species with low routine metabolic rates, low temperature sensitivity of routine metabolic rates, high anaerobic capacity, high hypoxia tolerance and high thermal tolerance.
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  • 文章类型: Journal Article
    Recent genome-resolved metagenomic analyses of microbial communities from diverse environments have led to the discovery of many novel lineages that significantly expand the phylogenetic breadth of Archaea. Here, we report the genomic characterization of a new archaeal family based on five metagenome-assembled genomes retrieved from acid mine drainage sediments. Phylogenomic analyses placed these uncultivated archaea at the root of the candidate phylum Parvarchaeota, which expand this lesser-known phylum into two family levels. Genes involved in environmental adaptation and carbohydrate and protein utilization were identified in the ultra-small genomes (estimated size 0.53-0.76 Mb), indicating a survival strategy in this harsh environment (low pH and high heavy metal content). The detection of genes with homology to sulfocyanin suggested a potential involvement in iron cycling. Nevertheless, the absence of the ability to synthesize amino acids and nucleotides implies that these archaea may acquire these biomolecules from the environment or other community members. Applying evolutionary history analysis to Parvarchaeota suggested that members of the two families could broaden their niches by acquiring the potentials of utilizing different substrates. This study expands our knowledge of the diversity, metabolic capacity, and evolutionary history of the Parvarchaeota.
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  • 文章类型: Journal Article
    所有动物都需要有关运动方向的信息,以便能够跟踪目标的轨迹(猎物,捕食者,协同)或控制导航过程。该信息由方向选择(DS)神经元提供,响应图像在一个独特的方向移动。已经在包括许多节肢动物的许多物种中描述了DS神经元。在这些动物中,大多数研究都集中在DS神经元,专门处理导航过程中产生的光流。相比之下,仅对与对象运动处理相关的DS神经元进行了一些研究。蟹Neohelice是一种已建立的实验模型,用于研究与视觉引导行为有关的神经元。这里,我们在该物种的雄性螃蟹中描述了一组新的DS神经元,它们对运动物体具有高度的方向选择性。通过完整动物的视叶中的细胞内记录和染色,对神经元进行了生理和形态学表征。由于它们在小叶复合体中的树干化,我们称这些细胞为小叶复合体定向细胞(LCDCs)。LCDCs还在先前未描述的原大脑外侧的小神经纤维中产生乔伯。LCDCs仅对水平运动做出响应。这很适合居住在公寓里的螃蟹的行为适应,密集拥挤的环境,其中大多数物体运动是由相邻的螃蟹沿水平面移动产生的。意义陈述方向选择性(DS)神经元是各种视觉行为的关键,包括,目标跟踪(猎物,捕食者,具体说明)和课程控制。这里,我们描述了一组新的显著定向神经元的生理学和形态学,这些神经元专门响应螃蟹的水平运动。这些神经元在小叶复合体和先前未描述的原大脑外侧小神经纤维中白化。这些细胞对水平运动的强烈敏感性代表了功能性神经元对居住在平坦环境中的动物的生活方式的适应的明显例子。
    All animals need information about the direction of motion to be able to track the trajectory of a target (prey, predator, cospecific) or to control the course of navigation. This information is provided by direction selective (DS) neurons, which respond to images moving in a unique direction. DS neurons have been described in numerous species including many arthropods. In these animals, the majority of the studies have focused on DS neurons dedicated to processing the optic flow generated during navigation. In contrast, only a few studies were performed on DS neurons related to object motion processing. The crab Neohelice is an established experimental model for the study of neurons involved in visually-guided behaviors. Here, we describe in male crabs of this species a new group of DS neurons that are highly directionally selective to moving objects. The neurons were physiologically and morphologically characterized by intracellular recording and staining in the optic lobe of intact animals. Because of their arborization in the lobula complex, we called these cells lobula complex directional cells (LCDCs). LCDCs also arborize in a previously undescribed small neuropil of the lateral protocerebrum. LCDCs are responsive only to horizontal motion. This nicely fits in the behavioral adaptations of a crab inhabiting a flat, densely crowded environment, where most object motions are generated by neighboring crabs moving along the horizontal plane.SIGNIFICANCE STATEMENT Direction selective (DS) neurons are key to a variety of visual behaviors including, target tracking (preys, predators, cospecifics) and course control. Here, we describe the physiology and morphology of a new group of remarkably directional neurons exclusively responsive to horizontal motion in crabs. These neurons arborize in the lobula complex and in a previously undescribed small neuropil of the lateral protocerebrum. The strong sensitivity of these cells for horizontal motion represents a clear example of functional neuronal adaptation to the lifestyle of an animal inhabiting a flat environment.
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  • 文章类型: Journal Article
    The Methylocystis and Methylosinus are two of the five genera that were included in the first taxonomic framework of methanotrophic bacteria created half a century ago. Members of both genera are widely distributed in various environments and play a key role in reducing methane fluxes from soils and wetlands. The original separation of these methanotrophs in two distinct genera was based mainly on their differences in cell morphology. Further comparative studies that explored various single-gene-based phylogenies suggested the monophyletic nature of each of these genera. Current availability of genome sequences from members of the Methylocystis/ Methylosinus clade opens the possibility for in-depth comparison of the genomic potentials of these methanotrophs. Here, we report the finished genome sequence of Methylocystis heyeri H2T and compare it to 23 currently available genomes of Methylocystis and Methylosinus species. The phylogenomic analysis confirmed that members of these genera form two separate clades. The Methylocystis/Methylosinus pan-genome core comprised 1,173 genes, with the accessory genome containing 4,941 and 11,192 genes in the shell and the cloud, respectively. Major differences between the genome-encoded environmental traits of these methanotrophs include a variety of enzymes for methane oxidation and dinitrogen fixation as well as genomic determinants for cell motility and photosynthesis.
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