enterovirus

肠道病毒
  • 文章类型: Journal Article
    1型糖尿病(T1D),需要强化胰岛素治疗的严重疾病,会增加并发症的风险并缩短寿命。某些病毒与T1D的病因学有关,与\'活\',最近在诊断时在胰腺中发现的复制型肠道病毒(EV)。这一发现促使一项使用抗病毒药物减缓疾病进展的试验。在新发病的T1D患者中,联合pleconaril和利巴韦林的6个月治疗保留了1年后的残余胰岛素产量。不像安慰剂.结果支持病毒可能在遗传易感个体中引起T1D的理论。一个低级的,持续性病毒感染可能会引发一系列最初涉及先天免疫系统的致病机制,诱导β细胞应激和新抗原释放,导致自身免疫,最终破坏产生胰岛素的β细胞。
    Type 1 diabetes (T1D), a severe disease requiring intensive insulin treatment, carries an increased risk for complications and reduced lifespan. Certain viruses have been implicated in T1D\'s etiology, with \'live\', replicating enteroviruses (EVs) recently found in the pancreas at diagnosis. This discovery prompted a trial to slow down disease progression using antiviral drugs. A 6-month treatment combining pleconaril and ribavirin in new-onset T1D patients preserved residual insulin production after 1 year, unlike placebo. The results support the theory that viruses may cause T1D in genetically susceptible individuals. A low-grade, persistent viral infection may initiate a cascade of pathogenic mechanisms initially involving the innate immune system, inducing β-cell stress and neoantigen release, leading to autoimmunity, and eventually the destruction of insulin-producing β-cells.
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  • 文章类型: Case Reports
    肠道病毒不是儿童肌炎和横纹肌溶解症的常见原因。我们报告了一例2岁男孩患有急性淋巴细胞白血病,并伴有播散性肠道病毒感染并伴有肝炎,肌炎,和横纹肌溶解症.通过支持性护理和大剂量静脉免疫球蛋白成功治疗了该病例。
    Enterovirus is not a common cause of myositis and rhabdomyolysis in children. We report a case of a two-year-old boy with acute lymphoblastic leukemia with disseminated enterovirus infection complicated by hepatitis, myositis, and rhabdomyolysis. The case was managed successfully with supportive care and high-dose intravenous immunoglobulins.
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  • 文章类型: Journal Article
    背景:在结合疫苗时代,病毒是脑膜炎的最常见原因。这里,我们评估了英格兰所有年龄组11年期间实验室确诊的病毒性脑膜炎的流行病学趋势.
    方法:在英国,医院实验室定期以电子方式向英国卫生安全局报告实验室确认的感染。提取了2013-2023年期间脑脊液中病毒检测阳性的记录。使用年中常住人口估计值计算具有置信区间的发病率。
    结果:有22,114例实验室确诊的病毒性脑膜炎病例,包括2013-19年期间的15299例(新冠肺炎之前),发病率从3.5/100,00(95CI,3.3-3.6)逐渐增加到3.9/100,000(95CI,3.6-4.1)。在2020-21年期间,当大流行限制到位时,有2061例(1.8/100,000;1.7-1.9),在2022-23年间(大流行后限制)增加到4754(4.2/100,000;4.0-4.3)。年龄<3个月的婴儿占所有病例的39.4%(8,702/22,048),2013-19年发病率稳定(504/100,000,95CI:491-517),随后在2020-21年期间大幅下降(204/100,000;188-221),然后在2022-23年期间上升(780/100,000;749-812),肠道病毒是最常见的原因(84.9%,7387/8,702;424.74/100,000;95CI,415.12-434.51),其次是副病毒(9.1%,792/8702;45.54/100,000;95CI,42.42-48.82)和单纯疱疹病毒(4.4%,380/8702;21.85/100,000;95CI,19.71-24.16)。大流行限制与肠道病毒(77.7%)和部分病毒(低64%)的发病率显着下降有关,社会限制解除后反弹。
    结论:自社会限制解除以来,病毒性脑膜炎的发病率已恢复到大流行前的水平。病毒性脑膜炎的发病率最高的仍然是3个月以下的婴儿,最常见的原因是肠病毒感染。
    BACKGROUND: In the conjugate vaccine era, viruses are the most common cause of meningitis. Here, we evaluated epidemiological trends in laboratory-confirmed viral meningitis across all age-groups over an 11-year period in England.
    METHODS: In England, hospital laboratories routinely report laboratory-confirmed infections electronically to the UK Health Security Agency. Records of positive viral detections in cerebrospinal fluid during 2013-2023 were extracted. Incidence rates with confidence intervals were calculated using mid-year resident population estimates.
    RESULTS: There were 22,114 laboratory-confirmed viral meningitis cases, including 15,299 cases during 2013-19 (pre COVID-19), with a gradual increase in incidence from 3.5/100,00 (95%CI: 3.3-3.6) to 3.9/100,000 (95%CI: 3.6-4.1). During 2020-21 when pandemic restrictions were in place, there were 2061 cases (1.8/100,000; 1.7-1.9), which increased to 4754 (4.2/100,000; 4.0-4.3) during 2022-23 (post pandemic restrictions). Infants aged <3 months accounted for 39.4% (8702/22,048) of all cases, with a stable incidence 2013-19 (504/100,000, 95%CI: 491-517), followed by a significant decline during 2020-21 (204/100,000; 188-221) and then an increase during 2022-23 (780/100,000; 749-812), with enteroviruses being the commonest cause (84.9%, 7387/8702; 424.74/100,000; 95%CI: 415.12-434.51), followed by parechoviruses (9.1%, 792/8702; 45.54/100,000; 95%CI: 42.42-48.82) and herpes simplex virus (4.4%, 380/8702; 21.85/100,000; 95%CI: 19.71-24.16). Pandemic restrictions were associated with significant declines in the incidence of enterovirus (77.7%) and parechoviruses (64% lower), with rebounds after societal restrictions were lifted.
    CONCLUSIONS: Rates of viral meningitis have returned to pre-pandemic levels since societal restrictions were lifted. The highest incidence of viral meningitis remains in infants aged <3 months and most commonly due to enteroviral infection.
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  • 文章类型: Journal Article
    柯萨奇病毒A16(CV-A16)是一种重要的手部病原体,脚,和口蹄疫(HFMD)和疱疹性咽峡炎(HA),有能力发展为严重的并发症,包括脑炎,无菌性脑膜炎,急性弛缓性麻痹,心肌炎,和其他关键条件。北京市流行病学监测系统,成立于2008年,包括29家医院和16个地区疾病控制中心。从2019年到2021年,CV-A16的循环特征是B1a和B1b进化枝的共同循环。直到2022年,北京才报告与进化枝B1c相关的多例手足口病病例。这项研究纳入了400例HFMD和493例HA病例。采用实时RT-PCR,共发现368例肠道病毒阳性病例,选择180个进行测序。在18.89%(34/180)的病例中检出CV-A16,仅次于CV-A6,占63.33%(114/180)。22例VP1基因全长序列成功扩增并测序,揭示了进化枝B1a的存在,B1b,和B1c在14、3和5例中,分别。2022年6月29日至7月17日,顺义区7公里直径区域内发生了5例B1c进化枝病例。对五个完整的VP1基因序列和两个全基因组序列的系统发育分析显示,在B1c印度分支内与2018年印度菌株(GenBank登录名:MH780757.1)紧密聚类,NCBIBLAST结果显示超过98%的相似性。比较序列分析确定了三个独特的氨基酸变异(P3S,V25A,和I235V)。2022年顺义区手足口病病例是北京首例时空相关CV-A16B1c进化枝感染病例,强调在该地区的HFMD和HA中加强对B1c进化枝CV-A16的监测的必要性。
    Coxsackievirus A16 (CV-A16) is a significant etiologic agent of hand, foot, and mouth disease (HFMD) and herpangina (HA), with the capacity to progress to severe complications, including encephalitis, aseptic meningitis, acute flaccid paralysis, myocarditis, and other critical conditions. Beijing\'s epidemiological surveillance system, established in 2008, encompasses 29 hospitals and 16 district disease control centers. From 2019 to 2021, the circulation of CV-A16 was characterized by the co-circulation of B1a and B1b clades. Multiple cases of HFMD linked to clade B1c has not been reported in Beijing until 2022. This study enrolled 400 HFMD and 493 HA cases. Employing real-time RT-PCR, 368 enterovirus-positive cases were identified, with 180 selected for sequencing. CV-A16 was detected in 18.89% (34/180) of the cases, second only to CV-A6, identified in 63.33% (114/180). Full-length VP1 gene sequences were successfully amplified and sequenced in 22 cases, revealing the presence of clades B1a, B1b, and B1c in 14, 3, and 5 cases, respectively. A cluster of five B1c clade cases occurred between June 29 and July 17, 2022, within a 7-km diameter region in Shunyi District. Phylogenetic analysis of five complete VP1 gene sequences and two full-genome sequences revealed close clustering with the 2018 Indian strain (GenBank accession: MH780757.1) within the B1c India branch, with NCBI BLAST results showing over 98% similarity. Comparative sequence analysis identified three unique amino acid variations (P3S, V25A, and I235V). The 2022 Shunyi District HFMD cases represent the first instances of spatiotemporally correlated CV-A16 B1c clade infections in Beijing, underscoring the necessity for heightened surveillance of B1c clade CV-A16 in HFMD and HA in this region.
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  • 文章类型: Journal Article
    手,脚,和口蹄疫(HFMD)是最常见的C类传染病之一,对全球公共卫生构成严重威胁。肠道病毒A71(EV-A71)和柯萨奇病毒A16(CV-A16)被认为是手足口病的主要致病原,自2008年柯萨奇病毒A6(CV-A6)在法国爆发以来,CV-A6已逐渐成为许多地区的主要病原体。CV-A6不仅感染儿童,也感染成人,并导致非典型的临床症状,如更广泛的皮疹,疱疹湿疹,高烧,和甲癣,与EV-A71和CV-A16相关的症状不同。重要的是,CV-A6基因重组率高,这可能导致毒力的变化和其他特征的快速进化,从而对公众健康构成严重威胁。迄今为止,尚未批准用于CV-A6预防或治疗的特定疫苗或疗法,因此,充分了解这种病毒的重组和进化之间的关系是至关重要的。这里,我们系统地回顾了在全球范围内发生的CV-A6基因重组事件,并探讨了这些事件如何促进病毒进化,从而提供有关未来手足口病监测和预防的重要信息。
    Hand, foot, and mouth disease (HFMD) is one of the most common class C infectious diseases, posing a serious threat to public health worldwide. Enterovirus A71 (EV-A71) and coxsackievirus A16 (CV-A16) have been regarded as the major pathogenic agents of HFMD; however, since an outbreak caused by coxsackievirus A6 (CV-A6) in France in 2008, CV-A6 has gradually become the predominant pathogen in many regions. CV-A6 infects not only children but also adults, and causes atypical clinical symptoms such as a more generalized rash, eczema herpeticum, high fever, and onychomadesis, which are different from the symptoms associated with EV-A71 and CV-A16. Importantly, the rate of genetic recombination of CV-A6 is high, which can lead to changes in virulence and the rapid evolution of other characteristics, thus posing a serious threat to public health. To date, no specific vaccines or therapeutics have been approved for CV-A6 prevention or treatment, hence it is essential to fully understand the relationship between recombination and evolution of this virus. Here, we systematically review the genetic recombination events of CV-A6 that have occurred worldwide and explore how these events have promoted virus evolution, thus providing important information regarding future HFMD surveillance and prevention.
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  • 文章类型: Case Reports
    本文介绍了一个具有免疫能力的男性青少年中肠道病毒和再激活的水痘带状疱疹病毒的双脑膜炎的独特病例,一个提供许多重要医学课程的案例,所有“吸引”围绕任何临床病例的病理生理学推理。
    This paper presents a unique case of double meningitis with enterovirus and reactivated varicella-zoster virus without shingles in an immunocompetent male teenager, a case that offers many important medical lessons, all \"gravitating\" around physiopathological reasoning of any clinical case in general.
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  • 文章类型: Journal Article
    CDC全球脊髓灰质炎专业实验室支持全球脊髓灰质炎病毒实验室网络进行环境监测(ES),以检测疫苗株脊髓灰质炎病毒的存在,疫苗衍生的脊髓灰质炎病毒,和高风险国家的野生脊髓灰质炎病毒。环境采样提供了有价值的补充信息,特别是在急性弛缓性麻痹(AFP)监测空白的地区,主要是15岁以下的儿童。与危地马拉国家卫生实验室(危地马拉国立卫生实验室)合作,每月收集污水可以筛查肠道病毒(EV)的存在,而不会产生额外的样本收集费用,运输,或浓度。按照标准检测算法,使用鼠重组成纤维细胞L-细胞(L20B)和人横纹肌肉瘤(RD)细胞分离脊髓灰质炎病毒。尽管可以分离非脊髓灰质炎肠道病毒(NPEV),该算法对脊髓灰质炎病毒的检测进行了优化。为了探索通过标准方法未发现的污水中是否存在其他EV,另外五个细胞系在小规模实验中进行了试验,和下一代测序(NGS)用于鉴定任何EV类型.人肺成纤维细胞(HLF)基于其分离EV-A属的能力来选择。在2020-2021年之间收集的污水浓缩物在HLF细胞中分离,并且任何细胞病变效应阳性分离物用于NGS。各种各样的电动汽车,包括回声病毒1、3、6、7、11、13、18、19、25、29;柯萨奇病毒A13、B2和B5,EV-C99,EVB,和脊髓灰质炎病毒(沙宾1和3)通过NGS的基因组分型鉴定。当通过系统发育分析比较EV基因型时,它显示许多EV是先前从海地收集的ES中分离出的基因组样病毒。肠道病毒的发生没有季节性,但是在人口较低的ES收集地点发现了更多样化的EV类型。在现有的脊髓灰质炎病毒ES算法中使用额外的细胞系可以通过提供有关EV循环的数据来增加价值,无需额外的样品收集或处理。下一代测序填补了知识空白,提供了危地马拉废水中存在的多种EV类型和EV全基因组序列的分子流行病学信息。
    The Global Specialized Polio Laboratory at CDC supports the Global Poliovirus Laboratory Network with environmental surveillance (ES) to detect the presence of vaccine strain polioviruses, vaccine-derived polioviruses, and wild polioviruses in high-risk countries. Environmental sampling provides valuable supplementary information, particularly in areas with gaps in surveillance of acute flaccid paralysis (AFP) mainly in children less than 15 years. In collaboration with Guatemala\'s National Health Laboratory (Laboratorio Nacional de Salud Guatemala), monthly sewage collections allowed screening enterovirus (EV) presence without incurring additional costs for sample collection, transport, or concentration. Murine recombinant fibroblast L-cells (L20B) and human rhabdomyosarcoma (RD) cells are used for the isolation of polioviruses following a standard detection algorithm. Though non-polio-Enteroviruses (NPEV) can be isolated, the algorithm is optimized for the detection of polioviruses. To explore if other EV\'s are present in sewage not found through standard methods, five additional cell lines were piloted in a small-scale experiment, and next-generation sequencing (NGS) was used for the identification of any EV types. Human lung fibroblast cells (HLF) were selected based on their ability to isolate EV-A genus. Sewage concentrates collected between 2020-2021 were isolated in HLF cells and any cytopathic effect positive isolates used for NGS. A large variety of EVs, including echoviruses 1, 3, 6, 7, 11, 13, 18, 19, 25, 29; coxsackievirus A13, B2, and B5, EV-C99, EVB, and polioviruses (Sabin 1 and 3) were identified through genomic typing in NGS. When the EV genotypes were compared by phylogenetic analysis, it showed many EV\'s were genomically like viruses previously isolated from ES collected in Haiti. Enterovirus occurrence did not follow a seasonality, but more diverse EV types were found in ES collection sites with lower populations. Using the additional cell line in the existing poliovirus ES algorithm may add value by providing data about EV circulation, without additional sample collection or processing. Next-generation sequencing closed gaps in knowledge providing molecular epidemiological information on multiple EV types and full genome sequences of EVs present in wastewater in Guatemala.
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  • 文章类型: Case Reports
    病毒感染通常是急性出血性结膜炎(AHC)流行的原因。AHC可以由腺病毒产生,肠道病毒70和柯萨奇病毒A24是主要病原体。AHC最初于1969年在加纳被发现,由肠道病毒70引起并导致全球大流行。自2000年以来,西班牙记录了与柯萨奇病毒A24变种有关的AHC爆发,巴基斯坦,新加坡,印度,韩国,和中国。2022年10月,海得拉巴地区内外报告的结膜炎病例突然激增。这种感染表现为眼睛发红的常见症状,放电,眼睛疼痛和结痂。收集来自110名患者的眼拭子样本,以鉴定和表征导致该流行病的病毒。我们检查了腺病毒,肠病毒,COVID-19和单纯疱疹病毒,使用医院市售的试剂盒。在国家顶点实验室进一步分析了肠道病毒5'-UTR和VP2基因中的保守区域,以表征血清型。16.36%(18/110)的患者中,除肠道病毒外,无1例阳性。从肠道病毒阳性样本中,在所有18份阳性样本中均观察到柯萨奇病毒A24.根据全长VP2基因的额外测序和随后的系统发育分析,这些临床分离株构成了与基因型IV-C5相关的新谱系簇。总之,目前海得拉巴爆发的急性出血性结膜炎,印度被追踪到柯萨奇病毒A24株GIVC5。
    Viral infection is frequently the cause for acute hemorrhagic conjunctivitis (AHC) epidemics. AHC can result from adenoviruses, with enterovirus 70 and coxsackievirus A24 being the primary agents. AHC was initially identified in Ghana in 1969, caused by enterovirus 70 and leading to a global pandemic. Since 2000, outbreaks of AHC linked to coxsackievirus A24 variant have been documented in Spain, Pakistan, Singapore, India, Korea, and China. A sudden surge of conjunctivitis cases reported in October 2022 in and out of the Hyderabad region. This infection presented with usual symptoms of redness of the eyes, discharge, pain in the eyes and crusting. Occular swab samples from 110 patients were collected in order to identify and characterize the virus that was causing the epidemic. We examined adenovirus, enterovirus, COVID-19 and Herpes Simplex Virus by using commercially kits available at the hospital. Conserved regions in the enteroviral 5\'-UTR and VP2 gene were analyzed further for characterization of serotype at the National apex laboratory. None of them was found positive except Enterovirus in 16.36 % (18/110) of the patients. From enterovirus-positive samples, the coxsackievirus A24 was observed in all 18 positive samples. These clinical isolates constitute a new lineage cluster associated with genotype IV-C5, according to additional sequencing of the full-length VP2 genes and subsequent phylogenetic analysis. In conclusion, the current outbreak of acute haemorrhagic conjunctivitis in Hyderabad, India was traced to the coxsackievirus A24 strain GIV C5.
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  • 文章类型: Journal Article
    手,口蹄疫(HFMD)是过去几十年来最常见的传染病之一。2013年后,柯萨奇病毒A6(CVA6)取代了肠道病毒71(EV-A71)和柯萨奇病毒A16(CVA16),在中国许多地区已成为手足口病的主要病原。本研究的目的是调查2022-2023年临沂市CVA6的遗传特征和分子流行病学。本研究共纳入965例HFMD病例,并基于VP1核苷酸序列进行分析以确定CVA6的进化轨迹。2022年,281例(281/386,72.8%)肠道病毒(EV)阳性,CVA6阳性217例(217/281,77.2%)。2023年,398个(398/579,68.7%)样本为电动汽车阳性,CVA6阳性243例(243/398,61.1%)。每年选择6个序列进行同源性分析。结果表明,临沂分离的12株菌株与原型菌株(AY421764)和中国报道的第一株CVA6菌株(JQ364886)相去甚远。系统发育分析表明,临沂分离的CVA6菌株均属于D3亚型。CVA6是临沂手足口病的常见病原体,和连续监测手足口病的病因是必要的。
    Hand, foot and mouth disease (HFMD) was one of the most common infectious disease in the past few decades. After 2013, coxsackievirus A6 (CVA6) has replaced enterovirus 71 (EV-A71) and coxsackievirus A16 (CVA16), becoming the predominant pathogen responsible for HFMD in many areas in China. The objective of this study is to investigate the genetic characteristics and molecular epidemiology of CVA6 in Linyi from 2022 to 2023. A total of 965 HFMD cases were enrolled in this study and analyses based on VP1 nucleotide sequences were performed to determine the evolutionary trajectory of CVA6. In 2022, 281 (281/386, 72.8%) were positive for enterovirus (EVs), and 217 (217/281, 77.2%) were CVA6 positive. In 2023, 398 (398/579, 68.7%) samples were positive for EVs, and 243 (243/398, 61.1%) were CVA6 positive. Six sequences were selected from each year for the homology analysis. The results showed that 12 strains isolated in Linyi were far from the prototype strain (AY421764) and the first CVA6 strain reported in China (JQ364886). Phylogenetic analysis showed that the CVA6 strains isolated in Linyi all belonged to D3 subgenotype. CVA6 is emerging as a common pathogen causing HFMD in Linyi, and continuous surveillance of HFMD etiological agents is necessary.
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  • 文章类型: Journal Article
    开发针对呼吸道病毒复制机制的安全有效的广谱抗病毒药物是大流行准备计划中的高度优先事项。这里,我们研究了一种新发现的核苷酸类似物对典型呼吸道病毒的多种RNA依赖性RNA聚合酶(RdRp)的作用机制.GS-646939是4'-氰基修饰的C-腺苷类似物氨基磷酸酯前药GS-7682的活性5'-三磷酸(TP)代谢物。酶动力学表明,人鼻病毒16型(HRV-16)和肠道病毒71型(EV-71)的RdRps以前所未有的选择性掺入GS-646939;GS-646939的掺入效率比其天然ATP对应物高20-50倍。呼吸道合胞病毒(RSV)和人偏肺病毒(HMPV)的RdRp复合物以相似的效率掺入GS-646939和ATP。相比之下,乙型流感RdRp显示出对ATP的明显偏好,而人线粒体RNA聚合酶(h-mtRNAP)未显示GS-646939的显著掺入。一旦整合到新生的RNA链中,GS-646939用作链终止剂,尽管较高的NTP浓度可以部分克服某些聚合酶的抑制作用。建模和生化数据表明,4'-修饰抑制RdRp易位。与GS-443902(1'-氰基修饰的前药remesivir和obeldesvir的活性三磷酸形式)的比较研究,不仅揭示了不同的抑制机制,而且病毒聚合酶的抑制谱也存在差异。总之,核苷酸类似物的1'-氰基和4'-氰基修饰提供了靶向几个呼吸道RNA病毒家族的聚合酶的互补策略。
    The development of safe and effective broad-spectrum antivirals that target the replication machinery of respiratory viruses is of high priority in pandemic preparedness programs. Here, we studied the mechanism of action of a newly discovered nucleotide analog against diverse RNA-dependent RNA polymerases (RdRp) of prototypic respiratory viruses. GS-646939 is the active 5\'-triphosphate (TP) metabolite of a 4\'-cyano modified C-adenosine analog phosphoramidate prodrug GS-7682. Enzyme kinetics show that the RdRps of human rhinovirus type 16 (HRV-16) and enterovirus 71 (EV-71) incorporate GS-646939 with unprecedented selectivity; GS-646939 is incorporated 20-50-fold more efficiently than its natural ATP counterpart. The RdRp complex of respiratory syncytial virus (RSV) and human metapneumovirus (HMPV) incorporate GS-646939 and ATP with similar efficiency. In contrast, influenza B RdRp shows a clear preference for ATP and human mitochondrial RNA polymerase (h-mtRNAP) does not show significant incorporation of GS-646939. Once incorporated into the nascent RNA strand, GS-646939 acts as a chain-terminator although higher NTP concentrations can partially overcome inhibition for some polymerases. Modeling and biochemical data suggest that the 4\'-modification inhibits RdRp translocation. Comparative studies with GS-443902, the active triphosphate form of the 1\'-cyano modified prodrugs remdesivir and obeldesivir, reveal not only different mechanisms of inhibition, but also differences in the spectrum of inhibition of viral polymerases. In conclusion, 1\'-cyano and 4\'-cyano modifications of nucleotide analogs provide complementary strategies to target the polymerase of several families of respiratory RNA viruses.
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