drug-protein binding

药物 - 蛋白质结合
  • 文章类型: Journal Article
    目的:评估药物-血浆结合(DPB)。通过支持液膜(HFiSESTSLM)和RP-HPLC分析,采用中空纤维注射器平衡采样。材料与方法:HFiSESTSLM和RP-HPLC用于评估三种弱碱性药物(美托洛尔,苯海拉明,和西地那非)具有不同的亲水性和对血浆的结合能力。结果:结果显示三种模型药物的DPB的药物依赖性幅度增加。DPB的这种趋势证实HFiSESTSLM具有确定药物的DPB所需的灵敏度。在测试的药物浓度范围内,DPB是药物浓度依赖性的,特别是在高浓度。结论:HFiSESTSLM和RP-HPLC提供了一种简单的,评估这些基本药物的DPB的简便且具有成本效益的程序。
    [方框:见正文]。
    Aim: The aim was to evaluate drug-plasma binding (DPB).by employing Hollow Fiber-in-Syringe Equilibrium Sampling Through Supported Liquid Membrane (HFiS ESTSLM) and RP-HPLC analysis. Materials & methods: HFiS ESTSLM and RP-HPLC were used to evaluate DPB of three weak basic drugs (Metoprolol, Diphenhydramine, and Sildenafil) with differing hydrophilicity and binding ability to blood plasma. Results: The results exhibited an increasing drug-dependent magnitude of DPB for the three model drugs. This trend of DPB confirmed that HFiS ESTSLM has the required sensitivity for determining DPB of the drugs. The DPB was drug concentration-dependent within the tested drug concentration range, especially at high concentration. Conclusion: HFiS ESTSLM and RP-HPLC offered a simple, easy and cost-effective procedure to evaluate DPB of these basic drugs.
    [Box: see text].
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  • 文章类型: Journal Article
    在这项工作中,已经评估了γ辐照的表面活性剂对药物-蛋白质结合的影响。使用PluronicF-127、PluronicL-35、吐温20和吐温80表面活性剂的辐照水溶液。进行了三种不同剂量的伽马射线照射,这四种表面活性剂即。,6、30和36kGy。两种药物,奥硝唑(ONZ)和替米沙坦(TMS)用于结合研究。分析了在药物-牛血清白蛋白(BSA)蛋白存在下四种辐照表面活性剂的作用。在初始步骤中将在甲醇-水性介质中的药物溶液与BSA合并。在接下来的两个步骤中,在未辐照和辐照表面活性剂存在下进行药物-BSA相互作用。比较了由于添加了辐照和未辐照表面活性剂而导致的药物-BSA的结果。通过紫外光谱法评估相互作用过程,DLS,zeta电位,浊度,和对接研究。如使用UV光谱研究从结合常数值确定的,对于经辐照的表面活性剂,观察到药物和四种表面活性剂的改善的结合。DLS测量表明,随着吸收剂量,胶束尺寸没有增加或减少的一般趋势。观察到胶束的结合和大小变化是高度药物和表面活性剂特异性的。在四种表面活性剂中,辐照的PluronicF-127显示出更高的结合亲和力。据我们所知,这是首次报道γ辐照表面活性剂对药物-BSA相互作用的影响。这可以应用于其他药物-蛋白质系统以将它们的相互作用调节到所需水平。由RamaswamyH.Sarma沟通。
    In this work, the effect of γ-irradiated surfactants on drug-protein binding has been assessed. Irradiated aqueous solutions of Pluronic F-127, Pluronic L-35, Tween 20, and Tween 80 surfactants were used. Gamma irradiation was carried out for three different doses, to these four surfactants viz., 6, 30, and 36 kGy. Two drugs, Ornidazole (ONZ) and Telmisartan (TMS) were used for the binding study. The effect of four irradiated surfactants in the presence of drug - Bovine serum albumin (BSA) protein was analyzed. The drug solutions in methanol-aqueous media were combined with BSA in the initial step. In the next two succeeding steps, drug-BSA interaction in the presence of unirradiated and irradiated surfactants were carried out. The results of drug-BSA due to addition of irradiated and unirradiated surfactants were compared. The interaction processes were assessed through UV Spectroscopy, DLS, zeta potential, turbidity, and docking studies. Improved binding was observed for both the drugs and four surfactants for irradiated surfactants as determined from the binding constant values using UV spectroscopic studies. The DLS measurements demonstrated no general trend of increase or decrease in micellar size with absorbed dose. The binding and change in the size of micelles were observed to be highly drug and surfactant-specific. Among the four surfactants, irradiated Pluronic F-127 showed higher binding affinity. To the best of our knowledge, this is the first report on the effect of γ-irradiated surfactant on drug-BSA interaction. This can be applied to other drug-protein systems to tune their interaction to the required level.Communicated by Ramaswamy H. Sarma.
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  • 文章类型: Journal Article
    Odanacatib(ODN)是一种选择性组织蛋白酶K抑制剂,可作为抗吸收剂治疗骨质疏松症。还发现ODN可有效降低严重牙周炎的影响。ODN与人血清白蛋白(HSA)之间的相互作用用光谱法研究,微观,和计算机模拟方法来表征它们的结合。HSA的荧光强度随着ODN浓度的增加而增加,并伴随着荧光光谱中的蓝移,这表明ODN结合后荧光团微环境周围的疏水形成。对于ODN-HSA结合获得中等结合亲和力,结合常数(Ka)值为104M-1。圆二色性结果表明,HSA的整体二级和三级结构在ODN结合时仅轻微改变。HSA的表面形态也受ODN结合的影响,显示聚集体形成。药物置换和分子对接结果表明,ODN优选与HSA亚结构域IB位点III结合,而分子动力学模拟表明,当位点III被ODN占据时,会形成稳定的蛋白质复合物。ODN-HSA复合物主要通过氢键结合来稳定,疏水相互作用,和范德华部队.这些发现为了解ODN在血液循环中的相互作用机制提供了更多信息,并可能有助于将来改善ODN的不良反应。
    Odanacatib (ODN) is a selective cathepsin K inhibitor that acts as an anti-resorptive agent to treat osteoporosis. ODN is also found effective in reducing the effect of severe periodontitis. The interaction between ODN and human serum albumin (HSA) was investigated using spectroscopic, microscopic, and in silico approaches to characterize their binding. The fluorescence intensity of HSA increased upon the addition of increasing concentrations of ODN accompanied by blueshift in the fluorescence spectrum, which suggested hydrophobic formation around the microenvironment of the fluorophores upon ODN binding. A moderate binding affinity was obtained for ODN-HSA binding, with binding constant (Ka) values of ∼104 M-1. Circular dichroism results suggested that the overall secondary and tertiary structures of HSA were both only slightly altered upon ODN binding. The surface morphology of HSA was also affected upon ODN binding, showing aggregate formation. Drug displacement and molecular docking results revealed that ODN preferably binds to site III in subdomain IB of HSA, while molecular dynamics simulations indicated formation of a stable protein complex when site III was occupied by ODN. The ODN-HSA complex was mainly stabilized by a combination of hydrogen bonding, hydrophobic interactions, and van der Waals forces. These findings provide additional information to understand the interaction mechanism of ODN in blood circulation and may help in future improvements on the adverse effects of ODN.
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  • 文章类型: Journal Article
    超快亲和提取(UAE)是微型亲和HPLC的一种形式,可用于快速测量溶液中溶质-结合剂相互作用的平衡常数。本研究使用色谱和平衡理论以及通用图来检查UAE获得准确所需的一般条件,精确,以及对这种相互作用的平衡常数的鲁棒测量。将预测结果与UAE在研究各种药物与两种转运蛋白:人血清白蛋白和α1-酸糖蛋白的结合的研究中获得的结果进行了比较。这些结合研究的最精确和最可靠的条件发生在溶质平衡自由分数具有中间值的系统中(F0≈0.20-0.80)。这些趋势与使用阿联酋的先前研究中看到的趋势显示出良好的一致性。进一步确定了溶质的表观游离分数如何与该溶质的解离速率相关,阿联酋期间溶质解离的时间,和溶质的平衡自由分数。这些结果也与实验结果一致,如华法林和格列齐特与人血清白蛋白的结合所获得的。最后一节检查了表观自由分数的变化,由溶质解离引起的,影响了阿联酋测量的平衡常数的准确性。此外,生成理论图,以允许选择在测量平衡常数期间提供给定精度水平的UAE条件。为阿联酋创建的方程式和确定的趋势是一般的方程式,可以在将来的工作中扩展到其他溶质和结合剂。
    Ultrafast affinity extraction (UAE) is a form of microscale affinity HPLC that can be employed to quickly measure equilibrium constants for solute-binding agent interactions in solution. This study used chromatographic and equilibrium theory with universal plots to examine the general conditions that are needed in UAE to obtain accurate, precise, and robust measurements of equilibrium constants for such interactions. The predicted results were compared to those obtained by UAE in studies that examined the binding of various drugs with two transport proteins: human serum albumin and α1-acid glycoprotein. The most precise and robust conditions for these binding studies occurred for systems with intermediate values for their equilibrium free fraction for the solute (F0 ≈ 0.20-0.80). These trends showed good agreement with those seen in prior studies using UAE. It was further determined how the apparent free fraction of a solute was related to the dissociation rate of this solute, the time allowed for solute dissociation during UAE, and the equilibrium free fraction for the solute. These results also agreed with experimental results, as obtained for the binding of warfarin and gliclazide with human serum albumin. The final section examined how a change in the apparent free fraction, as caused by solute dissociation, affected the accuracy of an equilibrium constant that was measured by UAE. In addition, theoretical plots were generated to allow the selection of conditions for UAE that provided a given level of accuracy during the measurement of an equilibrium constant. The equations created and trends identified for UAE were general ones that can be extended in future work to other solutes and binding agents.
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  • 文章类型: Journal Article
    由于与反应性二羰基如乙二醛(Go)和甲基乙二醛(MGo)形成高级糖基化终产物(AGEs),在糖尿病期间可发生蛋白质的修饰。人血清白蛋白(HSA)是一种血清蛋白,可与血液中的许多药物结合,并且已知可通过Go和MGo进行修饰。这项研究通过使用通过非共价蛋白包埋制备的高性能亲和微柱,检查了各种磺酰脲类药物与这些修饰形式的HSA的结合。采用区域洗脱实验来比较具有GO-或MGo-修饰的HSA与正常HSA的药物的保留和总体结合常数。将结果与文献中的值进行比较,例如使用含有共价固定的HSA或生物特异性吸附的HSA的亲和柱测量或估计。基于包埋的方法为大多数测试药物提供了3-5分钟内的全局亲和常数的估计,典型精度为±10-23%。每个截留的蛋白质微柱在至少60-70次注射和使用一个月期间是稳定的。用正常HSA获得的结果在95%置信水平上与文献中报道的给定药物的全局亲和常数一致。发现对于已经用临床相关水平的Go或MGo修饰的HSA,对于一些测试的药物,出现高达2.1倍的全局亲和常数的增加。在这项研究中获得的信息可用于将来调整这种基于包埋的方法,以研究和评估其他类型的药物与正常或修饰的结合剂之间的相互作用,以进行临床试验和生物医学研究。
    Modification of proteins can occur during diabetes due to the formation of advanced glycation end-products (AGEs) with reactive dicarbonyls such as glyoxal (Go) and methylglyoxal (MGo). Human serum albumin (HSA) is a serum protein that binds to many drugs in blood and that is known to be modified by Go and MGo. This study examined the binding of various sulfonylurea drugs with these modified forms of HSA by using high-performance affinity microcolumns prepared by non-covalent protein entrapment. Zonal elution experiments were employed to compare the retention and overall binding constants for the drugs with Go- or MGo-modified HSA vs normal HSA. The results were compared to values from the literature, such as measured or estimated using affinity columns containing covalently immobilized HSA or biospecifically-adsorbed HSA. The entrapment-based approach provided estimates of global affinity constants within 3-5 min for most of the tested drugs and with typical precisions of ±10-23%. Each entrapped protein microcolumn was stable for over at least 60-70 injections and one month of use. The results obtained with normal HSA agreed at the 95% confidence level with global affinity constants that have been reported for the given drugs in the literature. It was found for HSA that had been modified with clinically-relevant levels of either Go or MGo that an increase in the global affinity constant of up to 2.1-fold occurred for some of the tested drugs. The information acquired in this study can be used in the future to adapt this entrapment-based approach to study and evaluate interactions between other types of drugs and normal or modified binding agents for clinical testing and biomedical research.
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  • 文章类型: Journal Article
    采用超快亲和提取(UAE)和含有固定化人血清白蛋白(HSA)的亲和微柱来评估晚期糖基化对HSA及其与华法林结合的影响。该蛋白的Sudlow位点I的常见位点特异性探针。考虑了乙二醛(GO)和甲基乙二醛(MGO)对HSA的修饰,其中已知GO和MGO在许多类型的晚期糖基化终产物的形成中是重要的。通过UAE测量含有正常HSA或HSA的溶液中的华法林的游离药物分数,所述HSA或HSA已经被GO或MGO以在糖尿病期间的血清中所见的水平修饰。用GO修饰的HSA测量的游离级分在pH7.4和37°C下给出的缔合平衡常数范围为2.42-2.63×105M-1。这些值与使用正常HSA的华法林通过相同方法确定的2.33(±0.15)×105M-1值没有显着差异。使用MGO修饰的HSA的类似研究得出华法林的缔合平衡常数在3.07-3.31×105M-1的范围内,比正常HSA的值高1.32至1.42倍(差异在95%置信水平)。这些结果在基于亲和层析或使用华法林作为探针以检查HSA的Sudlow位点I处的药物相互作用和该蛋白的修饰形式的其他方法的未来结合研究中将是有价值的。这项工作还说明了如何使用阿联酋,分析时间只有几分钟,检测和测量药物与未修饰或修饰形式的可溶性结合剂或蛋白质的结合的微小变化。
    Ultrafast affinity extraction (UAE) and affinity microcolumns containing immobilized human serum albumin (HSA) were employed to evaluate the effect of advanced stage glycation on HSA and its binding to warfarin, a common site-specific probe for Sudlow site I of this protein. The modification of HSA by glyoxal (GO) and methylglyoxal (MGO) was considered, where GO and MGO are known to be important in the formation of many types of advanced glycation end products. Free drug fractions were measured by UAE for warfarin in solutions containing normal HSA or HSA that had been modified by GO or MGO at levels seen in serum during diabetes. The free fractions measured with the GO-modified HSA gave association equilibrium constants that ranged from 2.42-2.63 × 105 M-1 at pH 7.4 and 37 °C. These values were not significantly different from a value of 2.33 (±0.15) × 105 M-1 that was determined by the same method for warfarin with normal HSA. Similar studies using MGO-modified HSA gave association equilibrium constants for warfarin in the range of 3.07-3.31 × 105 M-1, which were 1.32- to 1.42-fold higher than the value seen for normal HSA (differences that were significant at the 95% confidence level). These results will be valuable in future binding studies based on affinity chromatography or other methods that employ warfarin as a probe to examine drug interactions at Sudlow site I of HSA and modified forms of this protein. This work also illustrates how UAE can be used, with analysis times of only minutes, to detect and measure small changes in the binding by drugs with unmodified or modified forms of a soluble binding agent or protein.
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  • 文章类型: Journal Article
    诸如血清蛋白的生物分子可以与体内的药物相互作用并影响其药物作用。分析这些相互作用的特定和精确的方法对于药物开发或监测以及诊断目的至关重要。亲和毛细管电泳(ACE)是一种可用于检查药物与血清蛋白之间的结合的技术,或血清或血液中发现的其他试剂。本文将回顾ACE的基本原理,以及相关的基于亲和力的毛细管电泳(CE)方法,并检查该领域与药物-蛋白质相互作用表征相关的最新进展。将概述可以在ACE和CE中用于此类工作的各种格式,包括每种方法的相对优点或缺点。还将介绍ACE和基于亲和力的CE方法在分析与血清蛋白和其他结合剂的药物相互作用中的各种应用。将讨论的ACE和相关技术的应用包括与血清试剂的药物相互作用研究,使用血清蛋白的手性药物分离,以及在杂合方法中使用CE表征药物与血清蛋白的结合。
    Biomolecules such as serum proteins can interact with drugs in the body and influence their pharmaceutical effects. Specific and precise methods that analyze these interactions are critical for drug development or monitoring and for diagnostic purposes. Affinity capillary electrophoresis (ACE) is one technique that can be used to examine the binding between drugs and serum proteins, or other agents found in serum or blood. This article will review the basic principles of ACE, along with related affinity-based capillary electrophoresis (CE) methods, and examine recent developments that have occurred in this field as related to the characterization of drug-protein interactions. An overview will be given of the various formats that can be used in ACE and CE for such work, including the relative advantages or weaknesses of each approach. Various applications of ACE and affinity-based CE methods for the analysis of drug interactions with serum proteins and other binding agents will also be presented. Applications of ACE and related techniques that will be discussed include drug interaction studies with serum agents, chiral drug separations employing serum proteins, and the use of CE in hybrid methods to characterize drug binding with serum proteins.
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  • 文章类型: Journal Article
    使用高效亲和微柱表征抗糖尿病药物瑞格列奈和那格列奈与正常和糖化形式的人血清白蛋白的结合。微柱仅包含nmol量的蛋白质,并以良好的精度和每个实验几分钟的时间对这些药物相互作用进行了详细分析。瑞格列奈与正常和糖化白蛋白的总体结合符合具有两种类型结合位点的模型:一组一个或两个中高亲和力区域和一组较大的较弱区域,其缔合平衡常数为105和103M-1,分别,pH7.4和37°C。竞争研究给出了瑞格列奈和那格列奈在Sudlow位点I的位点特异性关联常数,对于正常白蛋白为4.2×104和5.0×104M-1,对于那格列奈和糖化白蛋白,下降了26%-30%,对于瑞格列奈没有明显变化。在Sudlow站点II,瑞格列奈和那格列奈对正常白蛋白的结合常数为6.1×104和7.1×105M-1,糖化白蛋白使瑞格列奈在该位点的缔合常数增加1.6至1.8倍,那格列奈降低51%-58%。
    High-performance affinity microcolumns were used to characterize binding by the anti-diabetic drugs repaglinide and nateglinide with normal and glycated forms of human serum albumin. The microcolumns contained only nmol amounts of protein and provided a detailed analysis of these drug interactions with good precision and in a matter of minutes per experiment. The overall binding by repaglinide to normal and glycated albumin fits a model with two types of binding sites: a set of one or two moderate-to-high affinity regions and a larger set of weaker regions with association equilibrium constants of ∼105 and 103  M-1 , respectively, at pH 7.4 and 37°C. Competition studies gave site-specific association constants for repaglinide and nateglinide at Sudlow site I of 4.2 × 104 and 5.0 × 104  M-1 for normal albumin, with a decrease of 26%-30% being seen for nateglinide with glycated albumin and no significant change being noted for repaglinide. At Sudlow site II, repaglinide and nateglinide had association constants for normal albumin of 6.1 × 104 and 7.1 × 105  M-1 , with glycated albumin giving an increase in the association constant at this site for repaglinide of 1.6- to 1.8-fold and a decrease for nateglinide of 51%-58%.
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  • 文章类型: Journal Article
    最近已经开发了超快亲和提取(UAE),并用于测量药物和其他靶标与可溶性结合剂如血清蛋白的非结合(或游离)级分和结合或速率常数。这项研究检查了在低流速和高流速下在UAE中使用10mm×2.1mm内径亲和微柱时的长期稳定性(例如,0.5和3.5mL/min),经过一系列延长的注射。通过使用固定化的人血清白蛋白(HSA)和含有药物华法林(含或不含可溶性HSA)的样品作为模型系统来研究这种稳定性。在可溶性HSA存在下以0.5mL/min测量的游离华法林级分在高达150次注射时是稳定的,并且在3.5mL/min时变化<10%。UAE在3.5mL/min时估计的华法林与HSA的缔合平衡常数在50次注射期间没有显著变化,在100-150次注射期间变化仅为18-22%。通过结合0.5和3.5mL/min的UAE结果并采用新的两点方法,发现华法林从HSA的解离速率常数。即使在200次注射后,该值也没有显著变化。延长微柱使用对保留时间的影响,峰宽,华法林的峰值不对称性,在微柱的背压上,也考虑过。这些结果表明,UAE和HSA微柱可用于为自由溶质分数提供一致的值,结合常数,和一系列注射的速率常数。这些结果应有助于今后的工作,为评估提供指导,进一步发展,以及UAE在表征基于溶液的样品中涉及其他药物和结合剂的相互作用中的用途。
    Ultrafast affinity extraction (UAE) has recently been developed and employed for measuring non-bound (or free) fractions and binding or rate constants for drugs and other targets with soluble binding agents such as serum proteins. This study examined the long-term stability of 10 mm × 2.1 mm i.d. affinity microcolumns when used in UAE at both low and high flow rates (e.g., 0.5 and 3.5 mL/min) over an extended series of injections. This stability was investigated by using immobilized human serum albumin (HSA) and samples containing the drug warfarin with or without soluble HSA as a model system. The free warfarin fractions measured at 0.5 mL/min in the presence of soluble HSA were stable up to 150 injections and changed by <10% at 3.5 mL/min. The association equilibrium constant for warfarin with HSA that was estimated by UAE at 3.5 mL/min had no significant change over 50 injections and a change of only ∼18-22% over 100-150 injections. The dissociation rate constant for warfarin from HSA was found by combining UAE results at 0.5 and 3.5 mL/min and employing a new two-point approach, with no significant changes in this value being seen even after 200 injections. The effects of extended microcolumn use on the retention time, peak width, and peak asymmetry for warfarin, and on the backpressure of the microcolumn, were also considered. These results indicated that UAE and HSA microcolumns could be used to provide consistent values for free solute fractions, binding constants, and rate constants over a large series of injections. These results should be useful in future work by providing guidelines for the assessment, further development, and use of UAE in characterizing interactions involving other drugs and binding agents in solution-based samples.
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  • 文章类型: Journal Article
    The pseudoguaianolide-type sesquiterpene lactone (SL) britannin (BRT), found in different Inula species, has been characterized as a potent anticancer agent acting via modulation of the transcription factor NFkB and the Nrf2-Keap1 signaling pathway. In addition, a BRT-induced down-regulation of the immune checkpoint PD-L1 (programmed cell death ligand 1) expressed on cancer cells has been evidenced. Here we have performed a docking analysis of the direct binding of BRT to the PD-L1 protein, both in its monomeric and dimeric state. BRT appears to form stable complexes with PD-L1, with a preference for the dimeric form, binding at the interface of the two monomers. The calculated empirical energy of interaction (ΔE) value reaches -63.1 kcal/mol for the BRT-PD-L1 dimer complex, not far from the value calculated with the reference PD-L1 ligand BMS-202 (ΔE = -73.4 kcal/mol) under identical conditions. We also studied the potential PD-L1 dimer binding of 15 pseudoguaianolide sesquiterpene lactones analogues to BRT, including helenalin, gaillardin, bigelovin, coronopilin, and others. The docking analysis predicted that the SL chamissonolide (CHM) can also form equally stable complexes with PD-L1 dimer (ΔE = -64.8 kcal/mol). Preliminary compound structure-PD-L1 binding relationships have been delineated. This computational study supports the proposed interaction of BRT with PD-L1 and provides a guidance to the design of novel PD-L1 binders incorporating a SL-like tricyclic core unit.
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