In mesoscale eddies, the chemical properties and biological composition are different from those in the surrounding water due to their unique physical processes. The mechanism of physical-biological coupling in warm-core eddies is unclear, especially because no studies have examined the effects of environmental factors on bacteria and viruses. The purpose of the present study was to examine the influence of an anticyclonic warm eddy on the relationship between bacterial and viral abundances, as well as viral activity (viral production), at different depths. At the core of the warm eddy, the bacterial abundance (0.48 to 2.82 × 105 cells mL-1) fluctuated less than that outside the eddy (1.12 to 7.03 × 105 cells mL-1). In particular, there was a four-fold higher viral-bacterial abundance ratio (VBR) estimated within the eddy, below the layer of the deep chlorophyll maximum, than outside the eddy. An anticyclonic warm eddy with downwelling at its center may contribute to viruses being transmitted directly into the deep ocean through adsorption on particulate organic matter while sinking. Overall, our findings provide valuable insights into the interaction between bacterial and viral abundances and their ecological mechanisms within a warm eddy.

Artificial reefs (ARs) are a preferred option for managers due to their distinctive hydrodynamic properties, which support a highly productive local ecosystem. However, the hydrodynamics characteristics of ARs in natural marine environments have not been conducted. Being the first to explore the spatiotemporal characteristic of flow fields around ARs along tidal cycles in marine environments, this study redefined the upwelling and downwelling of ARs, based on natural vertical velocities, and separated the upwelling into co-direction upwelling and re-direction upwelling, and the downwelling into co-direction downwelling and re-direction downwelling. This study simulated the flow field in the Wanshan ARs area of the Pearl River Estuary along the tidal cycles using the MIKE3-FM. Numerical simulations revealed that (1) co-direction upwelling and co-direction downwelling were the dominant components of the vertical flow field effects of ARs; (2) the areas sum of upwelling and downwelling were largest in the medium water column, with about 1.6 and 1.03 times as large as the bottom and surface water column, respectively, while the fluxes sum of the upwelling and downwelling were largest in bottom water column, with approximately 1.3 and 2.2 times larger than those in the middle and surface water columns; (3) the area and volume of the upwelling and downwelling gradually decreased along neap-spring tide, exhibited significantly negative correlations with current speeds; while the upwelling flux and downwelling flux gradually increased along neap-spring tide; exhibited a significantly positive correlation with current speed; (4) the effects of tide to upwelling and downwelling of AR are forced by the northward velocity of current speed, the net flux of upwelling and downwelling showed a significant positive correlation with the northward velocity of current speed (r = 0.94). These results could provide a reference for assessing the flow field effect of ARs and a guide for the configuration and management of ARs.

Oceanic eddies exhibit remarkable coherence and longevity compared to other transient features in the surrounding flow. They possess the ability to transport properties over extensive distances while maintaining their material identity intact. The Lagrangian Coherent Structure (LCS) framework has proven effective in capturing these coherent eddies, where they display a solid-body-like rotation. Although various LCS approaches have been employed to investigate different facets of coherent eddies, a comprehensive understanding of their three-dimensional structures and internal dynamics remains elusive. This study aims to advance our comprehension of coherent eddies\' structural characteristics and delve into the precise nature of their internal dynamics by utilizing the Lagrangian Averaged Vorticity Deviation approach. Two eddies, one cyclonic and the other anti-cyclonic, were chosen from a high-resolution simulation carried out in the Bay of Bengal using the Regional Ocean Modeling System (ROMS). The findings unveil that these eddies have three-dimensional coherent cores resembling gently tapered cones that are broader at the surface and gradually narrow towards the bottom. Intriguingly, the dynamically coherent core of these eddies exhibits simultaneous upwelling and downwelling while maintaining their volumes during advection due to persistent material coherence. The three-dimensional trajectories followed by the fluid parcels inside the coherent core are helical. Their two-dimensional horizontal projections show alternating spiral bands of upwelling and downwelling which are the manifestations of Vortex Rossby Waves. These observations lead to a conceptual framework of a three-dimensional helico-spiralling recirculation pattern within the coherent cores of eddies.

Low concentrations of azaspiracids have been found in bivalve molluscs all over the Northern and Northwestern coast of the Iberian Peninsula. The detections started in June 2016 and lasted until March 2017. The observed toxin profile was dominated by AZA2, followed by AZA1 and some other AZAs that were detected only in some samples. Some compounds producing fragments characteristics of AZAs but that do not fit with any of the known ones were also found. The causative agent has not been identified but, in sight of the toxin profile in the bivalves, it seems that it should be a new species or strain. The detections of AZAs in bivalves in the Northern Coast was linked to downwelling or upwelling relaxation and, in the Galician Rías, took place (with only a few exceptions) in the outer (more oceanic) part, suggesting that the responsible species develops at the open sea and that the populations are advected to the shore.