deletion/duplication

  • 文章类型: Meta-Analysis
    评估非侵入性产前筛查(NIPS)在筛查拷贝数变异(CNV)中的诊断准确性。
    通过将我们的研究结果与其他文章中报道的结果相结合,我们进行了系统综述和荟萃分析。我们回顾性收集了2019年12月至2022年2月在杭州市妇女医院进行NIPS检测的孕妇数据。同时,系统搜索PubMed,进行了EMBASE和WebofScience,以确定所有相关的同行评审出版物。基于随机效应模型进行统计分析以确定阳性预测值(PPV)的合并估计。
    共纳入29项研究,涉及2,667名女性。在检测CNV时NIPS的合并PPV为32.86%(95%置信区间[24.61-41.64])。统计异质性高,而在这项荟萃分析中没有发现显著的发表偏倚.没有足够的数据来准确地确定敏感性和特异性,因为大多数研究只对高危女性进行验证性测试.
    在CNV的筛选中,NIPS的PPV约为33%。在提供此类全基因组NIPS测试时,应牢记测试前指导和随后的测试后咨询的注意事项。
    UNASSIGNED: To assess the diagnostic accuracy of noninvasive prenatal screening (NIPS) in screening for copy number variations (CNVs).
    UNASSIGNED: We conducted a systematic review and meta-analysis by combining our study results with those reported in other articles. We retrospectively collected the data of pregnant women with NIPS testing in the Hangzhou Women\'s Hospital from December 2019 to February 2022. Simultaneously, a systematic search of PubMed, EMBASE, and Web of Science was carried out to identify all relevant peer-reviewed publications. Statistical analysis was performed based on the random-effects model to determine a pooled estimate of the positive predictive value (PPV).
    UNASSIGNED: A total of 29 studies involving 2,667 women were included for analysis. The pooled PPV of NIPS in the detection of CNVs was 32.86% (95% confidence interval [24.61-41.64]). Statistical heterogeneity was high, while no significant publication bias was found in this meta-analysis. There were insufficient data to accurately determine sensitivity and specificity, as most studies only performed confirmatory tests on high-risk women.
    UNASSIGNED: The PPV of NIPS in screening for CNVs was approximately 33%. Cautions should be kept in mind for the pretest guidance and subsequent after-test counseling when offering such genome-wide NIPS tests.
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  • 文章类型: Case Reports
    背景:精神运动延迟,癫痫和畸形特征是由于涉及早期胚胎发育阶段的关键基因的染色体失衡或突变而在多种综合征中描述的临床体征。在这种情况下,我们报告了一名10岁的突尼斯患者,有这三种症状。我们的目标是确定发展的原因,该患者的行为和面部异常。方法:为此,我们使用了显带细胞遗传学(核型)和阵列比较基因组杂交(阵列CGH)。结果:核型有利于患者7号染色体的衍生物,ArrayCGH分析显示7p22.3-p22.1(4,56Mb)中的遗传物质丢失,并在8q24.23-q24(9.20Mb)处增加母体7/8相互易位。对不平衡区域进行了计算机模拟分析,结果表明7p22.3-p22.1缺失包含八个基因。其中,BRAT1基因,先前在几种神经发育疾病中描述过,可能是一个候选基因,其缺失可能与患者的表型相关。然而,8q24.23-q24重复可能与该患者的表型有关.结论:在这项研究中,我们首次报道了一名精神病患者的7p缺失/8q重复,癫痫和面部畸形。我们的研究表明,在下一代测序时代,ArrayCGH仍然可用于为患有神经发育异常的患者提供决定性的遗传诊断。
    Background: Psychomotor delay, epilepsy and dysmorphic features are clinical signs which are described in multiple syndromes due to chromosomal imbalances or mutations involving key genes implicated in the stages of Early Embryonic Development. In this context, we report a 10 years old Tunisian patient with these three signs. Our objective is to determine the cause of developmental, behavioral and facial abnormalities in this patient. Methods: We used banding cytogenetics (karyotype) and Array Comparative Genomic Hybridization (Array CGH) to this purpose. Results: The karyotype was in favor of a derivative of chromosome 7 in the patient and Array CGH analysis revealed a loss of genetic material in 7p22.3-p22.1 (4,56 Mb) with a gain at 8q24.23-q24 (9.20 Mb) resulting from maternal 7/8 reciprocal translocation. An in silico analysis of the unbalanced region was carried out and showed that the 7p22.3-p22.1 deletion contains eight genes. Among them, BRAT1 gene, previously described in several neurodevelopmental diseases, may be a candidate gene which absence could be correlated to the patient\'s phenotype. However, the 8q24.23-q24 duplication could be involved in the phenotype of this patient. Conclusion: In this study, we report for the first time a 7p deletion/8q duplication in a patient with psychomoteur delay, epilepsy and facial dysmorphism. Our study showed that Array CGH still useful for delivering a conclusive genetic diagnosis for patients having neurodevelopmental abnormalities in the era of next-generation sequencing.
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  • 文章类型: Case Reports
    Rearrangements of the region 1q42.13q43 are rare, with only 7 cases reported to date. The imbalances described are usually the result of inherited translocations with other chromosomes. Moreover, few cases of both inter- and intrachromosomal deletions/duplications detected cytogenetically have been described. We report the molecular cytogenetic characterization of an inverted insertion involving the region 1q42.13q43 and segregating in 2 generations of a family. The deletion and the duplication of the same segment were detected in 2 affected family members. SNP array analysis showed the familial origin of the deletion/duplication due to the occurrence of a crossing-over during meiosis. Our report underlines the importance of determining the correct origin of chromosomal aberrations using different molecular cytogenetic tests in order to provide a good estimation of the reproductive risk for the members of the family.
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