degrader

降解器
  • 文章类型: Journal Article
    多项研究表明,具有微卫星不稳定性(MSI)的癌细胞无法耐受Werner综合征解旋酶(WRN)的丧失,而微卫星稳定(MSS)癌细胞则不是。因此,WRN代表了一种有希望的新的合成致死靶标,用于开发用MSI治疗癌症的药物。鉴于WRN活性抑制剂在临床试验中的有效性如何的不确定性,以及肿瘤对WRN抑制剂产生耐药性的可能性,需要阻碍WRN功能的替代策略。蛋白水解靶向嵌合体(PROTACs)是靶向特定蛋白质进行降解的异双功能小分子。这里,我们设计了WRN基因座,使基因产物与溴结构域(Bd)标签融合,使用特定于Bd标记的AGB-1PROTAC启用有条件的WRN降级。我们的数据显示,WRN降解在MSI而不是MSS细胞系中具有高毒性。在MSI单元格中,WRN退化导致G2/M阻滞,染色体断裂和ATM激酶激活。我们还描述了一种基于多色细胞的平台,用于轻松测试MSI与MSS细胞系中的选择性毒性。一起,我们的数据表明,降解剂方法是靶向MSI癌症中WRN的潜在有效方法,并为开发WRN特异性PROTAC化合物铺平了道路.
    Multiple studies have demonstrated that cancer cells with microsatellite instability (MSI) are intolerant to loss of the Werner syndrome helicase (WRN), whereas microsatellite-stable (MSS) cancer cells are not. Therefore, WRN represents a promising new synthetic lethal target for developing drugs to treat cancers with MSI. Given the uncertainty of how effective inhibitors of WRN activity will prove in clinical trials, and the likelihood of tumours developing resistance to WRN inhibitors, alternative strategies for impeding WRN function are needed. Proteolysis-targeting chimeras (PROTACs) are heterobifunctional small molecules that target specific proteins for degradation. Here, we engineered the WRN locus so that the gene product is fused to a bromodomain (Bd)-tag, enabling conditional WRN degradation with the AGB-1 PROTAC specific for the Bd-tag. Our data revealed that WRN degradation is highly toxic in MSI but not MSS cell lines. In MSI cells, WRN degradation caused G2/M arrest, chromosome breakage and ATM kinase activation. We also describe a multi-colour cell-based platform for facile testing of selective toxicity in MSI versus MSS cell lines. Together, our data show that a degrader approach is a potentially powerful way of targeting WRN in MSI cancers and paves the way for the development of WRN-specific PROTAC compounds.
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  • 文章类型: Journal Article
    三阴性乳腺癌是临床上最恶性的亚型之一,迫切需要寻找新的治疗方法。p21激活的激酶I(PAK1)被认为是TNBC的有吸引力的治疗靶标。在这项研究中,我们通过将VHL或CRBN连接酶配体与烷基链或PEG链连接的PAK1抑制剂缀合,设计并合成了一系列新型PROTACPAK1降解剂。最有前途的化合物,19s,可以在低至0.1μM的浓度下显著降解PAK1蛋白,并在MDA-MB-231细胞中实现了有效的抗增殖活性,IC50值为1.27μM。此外,19s在体外表现出有效的抗迁移活性,并在体内诱导快速的肿瘤消退。总的来说,这些发现证明19s是一种有效的新型PAK1降解剂,具有治疗TNBC的潜力。
    Triple-negative breast cancer is one of the most malignant subtypes in clinical practice, and it is urgent to find new therapies. The p21-activated kinase I (PAK1) has been considered to be an attractive therapeutic target for TNBC. In this study, we designed and synthesized a series of novel PROTAC PAK1 degraders by conjugating VHL or CRBN ligase ligands to PAK1 inhibitors which are connected by alkyl chains or PEG chains. The most promising compound, 19s, can significantly degrade PAK1 protein at concentrations as low as 0.1 μM, and achieves potent anti-proliferative activity with an IC50 value of 1.27 μM in MDA-MB-231 cells. Additionally, 19s exhibits potent anti-migration activity in vitro and induces rapid tumor regression in vivo. Collectively, these findings document that 19s is a potent and novel PAK1 degrader with promising potential for TNBC treatment.
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  • 文章类型: Journal Article
    EGFR的异常激活通常与各种恶性肿瘤有关。使其成为抗肿瘤治疗的重要靶点。然而,传统的靶向抑制剂有几个局限性,如耐药性和副作用。许多研究集中在开发EGFR降解剂以克服这种抗性并增强对肿瘤的治疗效果。蛋白水解靶向嵌合体(PROTAC)和基于溶酶体的降解技术在降解EGFR方面取得了重大进展。本文综述了EGFR的结构和功能。抵抗,特别是通过蛋白酶体和溶酶体降解EGFR的研究进展和活性。此外,这篇综述旨在为新型EGFR降解物的开发提供见解。
    [方框:见正文]。
    Abnormal activation of EGFR is often associated with various malignant tumors, making it an important target for antitumor therapy. However, traditional targeted inhibitors have several limitations, such as drug resistance and side effects. Many studies have focused on the development of EGFR degraders to overcome this resistance and enhance the therapeutic effect on tumors. Proteolysis targeting chimeras (PROTAC) and Lysosome-based degradation techniques have made significant progress in degrading EGFR. This review provides a summary of the structural and function of EGFR, the resistance, particularly the research progress and activity of EGFR degraders via the proteasome and lysosome. Furthermore, this review aims to provide insights for the development of the novel EGFR degraders.
    [Box: see text].
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  • 文章类型: Journal Article
    在过去的二十年里,随着IMiDs和indisulam等MG降解剂的出现,分子胶(MGs)逐渐引起了制药界的关注。此类分子通过促进靶蛋白与E3连接酶之间的相互作用来降解靶蛋白。此外,作为化学诱导剂,MGs促进同源蛋白和异源蛋白的二聚化形成三元复合物,在调节生物活性方面有很大的前景。本文综述了MGs在蛋白质-蛋白质相互作用(PPI)稳定性和蛋白质降解药物开发领域的应用。我们彻底分析了各种MGs的结构以及MGs与各种生物活性分子之间的相互作用,从而为PPI稳定剂和新型降解剂的开发提供了新的视角。
    Over the past two decades, molecular glues (MGs) have gradually attracted the attention of the pharmaceutical community with the advent of MG degraders such as IMiDs and indisulam. Such molecules degrade the target protein by promoting the interaction between the target protein and E3 ligase. In addition, as a chemical inducer, MGs promote the dimerization of homologous proteins and heterologous proteins to form ternary complexes, which have great prospects in regulating biological activities. This review focuses on the application of MGs in the field of drug development including protein-protein interaction (PPI) stability and protein degradation. We thoroughly analyze the structure of various MGs and the interactions between MGs and various biologically active molecules, thus providing new perspectives for the development of PPI stabilizers and new degraders.
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  • 文章类型: Journal Article
    目前,针对程序性细胞死亡配体1(PD-L1)的抗体药物在癌症治疗中取得了有希望的结果,而小分子药物的发展滞后。在这项研究中,我们根据PROTAC设计原理设计并合成了一系列PD-L1降解剂,利用PD-L1抑制剂A56。通过对配体和连接体的系统筛选以及对降解物的构效关系的研究,我们鉴定了两种高活性化合物,9i和9j。这些化合物增强CD4+的水平,CD8+,颗粒酶B,和穿孔素,显示了显着的体内抗肿瘤作用,肿瘤生长抑制(TGI)高达57.35%。两种化合物都促进PD-L1从细胞表面的内化,并通过蛋白酶体和溶酶体途径促进其降解。同时也保持对PD-1/PD-L1相互作用的抑制。总之,我们的研究结果为开发基于联苯的PROTAC靶向和降解PD-L1的抗肿瘤药物提供了新的策略和机制.
    Currently, antibody drugs targeting programmed cell death ligand 1 (PD-L1) have achieved promising results in cancer treatment, while the development of small-molecule drugs lags behind. In this study, we designed and synthesized a series of PD-L1-degrading agents based on the PROTAC design principle, utilizing the PD-L1 inhibitor A56. Through systematic screening of ligands and linkers and investigating the structure-activity relationship of the degraders, we identified two highly active compounds, 9i and 9j. These compounds enhance levels of CD4+, CD8+, granzyme B, and perforin, demonstrating significant in vivo antitumor effects with a tumor growth inhibition (TGI) of up to 57.35 %. Both compounds facilitate the internalization of PD-L1 from the cell surface and promote its degradation through proteasomal and lysosomal pathways, while also maintaining inhibition of the PD-1/PD-L1 interaction. In summary, our findings provide a novel strategy and mechanism for developing biphenyl-based PROTAC antitumor drugs targeting and degrading PD-L1.
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  • 文章类型: Journal Article
    布鲁顿的酪氨酸激酶(BTK)抑制剂彻底改变了B细胞淋巴瘤如慢性淋巴细胞白血病(CLL)的治疗前景。一流的BTK抑制剂依鲁替尼最近通过更安全但仍面临抗性突变挑战的共价BTK抑制剂获得了成功。非共价BTK抑制剂pirtobrutinib最近被批准用于复发和难治性CLL,以及非共价BTK抑制剂是否会取代共价BTK抑制剂作为单独或组合的前期治疗选择将被确定。同时,新的BTK抑制剂和BTK降解剂正在争夺其在B细胞癌和自身免疫性疾病的潜在未来格局中的地位。这篇综述将涵盖BTK抑制剂开发的最新进展,以及根据这些最新发现,该领域正在发展的领域。
    Bruton\'s tyrosine kinase (BTK) inhibitors have revolutionized the treatment landscape for B cell lymphomas such as chronic lymphocytic leukemia (CLL). The first-in-class BTK inhibitor ibrutinib has recently been succeeded by covalent BTK inhibitors that are safer but still face challenges of resistance mutations. The noncovalent BTK inhibitor pirtobrutinib was recently approved for relapsed and refractory CLL, and whether noncovalent BTK inhibitors will supplant covalent BTK inhibitors as upfront treatment options either alone or in combination will be determined. Meanwhile, newer BTK inhibitors and BTK degraders are vying for their place in the potential future landscape of B cell cancers as well as autoimmune diseases. This review will cover the latest progress in BTK inhibitor development and where the field is moving in light of these recent discoveries.
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  • 文章类型: Journal Article
    雄激素受体(AR)是治疗前列腺癌的一个有吸引力的靶点,考虑其在局限性和转移性前列腺癌的发展和进展中的作用。前列腺癌的高全球死亡率负担,尽管药物治疗如雄激素剥夺或AR拮抗剂治疗,强调了探索替代战略的必要性。一种策略涉及使用异双功能降解剂,也被称为蛋白水解靶向嵌合体,它们是抑制扩增或突变靶标的新型小分子疗法。这里,该研究报告了一种新型的基于小脑的AR降解剂,UBX-390,并证明其优于已建立的AR降解剂的活性,例如ARV-110或ARCC-4,在短期和长期治疗条件下的前列腺癌细胞中。UBX-390抑制AR的染色质结合和基因表达,并在治疗抗性前列腺癌患者中显示出AR突变体降解的实质性功效。UBX-390是一种优化的AR降解剂,具有治疗去势抵抗性前列腺癌的巨大潜力。
    The androgen receptor (AR) is an attractive target for treating prostate cancer, considering its role in the development and progression of localized and metastatic prostate cancer. The high global mortality burden of prostate cancer, despite medical treatments such as androgen deprivation or AR antagonist therapy, highlights the need to explore alternative strategies. One strategy involves the use of heterobifunctional degraders, also known as proteolysis-targeting chimeras, which are novel small-molecule therapeutics that inhibit amplified or mutated targets. Here, the study reports a novel cereblon-based AR degrader, UBX-390, and demonstrates its superior activity over established AR degraders, such as ARV-110 or ARCC-4, in prostate cancer cells under short- and long-term treatment conditions. UBX-390 suppresses chromatin binding and gene expression of AR and demonstrates substantial efficacy in the degradation of AR mutants in patients with treatment-resistant prostate cancer. UBX-390 is presented as an optimized AR degrader with remarkable potential for treating castration-resistant prostate cancer.
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  • 文章类型: Journal Article
    所有人类癌症的约三分之一编码锁定在组成性活化状态的异常RAS蛋白,以驱动恶性转化和不受控制的肿瘤生长。尽管用于治疗突变KRAS癌症的小分子的发展取得了进展,需要对所有RAS同种型和变体有效并且避免耐药性的pan-RAS抑制剂。我们先前已经表明,天然存在的细菌酶RAS/RAP1特异性内肽酶(RRSP)是一种有效的RAS降解物,可以重新设计为生物疗法以诱导结直肠消退,乳房,和胰腺肿瘤.这里,我们已经开发了一种通过mRNA递送在体内表达这种RAS降解物的策略,该策略使用合成的非病毒基因递送平台,该平台由与树枝状阳离子肽(PPDP2)缀合的聚(乙二醇)-b-聚(硫化丙烯)(PEG-b-PPS)嵌段共聚物组成.使用这个策略,显示PPDP2将mRNA递送到人和小鼠胰腺细胞,导致RRSP基因表达,活动,和细胞增殖的丧失。Further,胰腺肿瘤减少,残留肿瘤缺乏可检测的RAS和磷酸化的ERK。这些数据支持RAS降解剂的mRNA负载的合成纳米载体递送可以中断胰腺癌细胞内的RAS信号传导系统,同时避免治疗期间的副作用。
    About one-third of all human cancers encode abnormal RAS proteins locked in a constitutively activated state to drive malignant transformation and uncontrolled tumor growth. Despite progress in development of small molecules for treatment of mutant KRAS cancers, there is a need for a pan-RAS inhibitor that is effective against all RAS isoforms and variants and that avoids drug resistance. We have previously shown that the naturally occurring bacterial enzyme RAS/RAP1-specific endopeptidase (RRSP) is a potent RAS degrader that can be re-engineered as a biologic therapy to induce regression of colorectal, breast, and pancreatic tumors. Here, we have developed a strategy for in vivo expression of this RAS degrader via mRNA delivery using a synthetic nonviral gene delivery platform composed of the poly(ethylene glycol)-b-poly(propylene sulfide) (PEG-b-PPS) block copolymer conjugated to a dendritic cationic peptide (PPDP2). Using this strategy, PPDP2 is shown to deliver mRNA to both human and mouse pancreatic cells resulting in RRSP gene expression, activity, and loss of cell proliferation. Further, pancreatic tumors are reduced with residual tumors lacking detectable RAS and phosphorylated ERK. These data support that mRNA-loaded synthetic nanocarrier delivery of a RAS degrader can interrupt the RAS signaling system within pancreatic cancer cells while avoiding side effects during therapy.
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  • 文章类型: Journal Article
    KRAS是一种与肿瘤进展密切相关的关键致癌蛋白,以及瞄准KRAS的困难导致它被归类为不可用的目标。在各种KRAS突变中,KRASG12D非常普遍,代表了一个有前途的治疗靶点。然而,目前还没有批准的抑制剂。
    这篇综述通过搜索PubMed中的相关信息,总结了许多以KRASG12D抑制剂或降解剂为特征的专利和文献,2021年至2024年2月的SciFinder和WebofScience数据库,概述了在设计策略方面抑制KRASG12D的研究进展,化学结构,生物活动,和临床进展。
    自AMG510(Sotorasib)获得批准以来,人们越来越关注KRASG12D的抑制作用,导致相关抑制剂和降解剂的大量报道。其中,MRTX1133,作为第一个进入临床试验的KRASG12D抑制剂,已在各种携带KRASG12D的人类肿瘤异种移植模型中表现出优异的肿瘤抑制。重要的是要注意,然而,了解KRAS抑制引起的获得性耐药机制并开发其他联合疗法至关重要。此外,寻求KRASG12D的共价抑制也具有显著的潜力。
    UNASSIGNED: KRAS is a critical oncogenic protein intricately involved in tumor progression, and the difficulty in targeting KRAS has led it to be classified as an \'undruggable target.\' Among the various KRAS mutations, KRASG12D is highly prevalent and represents a promising therapeutic target, yet there are currently no approved inhibitors for it.
    UNASSIGNED: This review summarizes numerous patents and literature featuring inhibitors or degraders of KRASG12D through searching relevant information in PubMed, SciFinder and Web of Science databases from 2021 to February 2024, providing an overview of the research progress on inhibiting KRASG12D in terms of design strategies, chemical structures, biological activities, and clinical advancements.
    UNASSIGNED: Since the approval of AMG510 (Sotorasib), there has been an increasing focus on the inhibition of KRASG12D, leading to numerous reports of related inhibitors and degraders. Among them, MRTX1133, as the first KRASG12D inhibitor to enter clinical trials, has demonstrated excellent tumor suppression in various KRASG12D-bearing human tumor xenograft models. It is important to note, however, that understanding the mechanisms of acquired resistance caused by KRAS inhibition and developing additional combination therapies is crucial. Moreover, seeking covalent inhibition of KRASG12D also holds significant potential.
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  • 文章类型: Journal Article
    分子胶(MG)降解剂包括植物激素和治疗药物,已成为药物发现的热门话题。与二价蛋白水解靶向嵌合体(PROTACs)不同,单价MGs可以通过增强其与E3泛素连接酶的相互作用来触发不可连接蛋白的降解。这里,我分析了天然MG降解剂的特性,将它们与合成的形成对比,并为优化MG提供了理论依据。在基于MG的自然降解系统中,只有当所有三个伙伴(MG,E3连接酶,和底物)存在,而任何两个成分之间的亲和力要么弱,要么不可检测。基材降解后,由于其低的微摩尔亲和力,MG将从其受体(E3连接酶)解离。相比之下,合成MGs,通过阻断CRBN-天然底物相互作用或通过占据CDK12的活性位点,例如免疫调节药物(IMiDs)和CR8是其受体的有效抑制剂。受大自然的启发,IMiDs对CRBN的亲和力可以降低,使这些化合物降解没有E3抑制活性,因此,最小化对CRBN生理底物的干扰。同样,CR8-CDK相互作用可以被削弱以使降解剂功能与激酶抑制解偶联。为了模仿自然的例子并减少副作用,应考虑缺乏抑制活性的MG降解物的未来发展。
    Molecular glue (MG) degraders include plant hormones and therapeutic drugs and have become a hot topic in drug discovery. Unlike bivalent proteolysis targeting chimeras (PROTACs), monovalent MGs can trigger the degradation of non-ligandable proteins by enhancing their interaction with E3 ubiquitin ligases. Here, I analyze the characteristics of natural MG degraders, contrast them with synthetic ones, and provide a rationale for optimizing MGs. In natural MG-based degradation systems, a stable complex is only formed when all three partners (MG, E3 ligase, and substrate) are present, while the affinities between any two components are either weak or undetectable. After the substrate is degraded, the MG will dissociate from its receptor (E3 ligase) due to their low micromolar affinity. In contrast, synthetic MGs, such as immunomodulatory drugs (IMiDs) and CR8, are potent inhibitors of their receptors by blocking the CRBN-native substrate interaction or by occupying the active site of CDK12. Inspired by nature, the affinities of IMiDs to CRBN can be reduced to make those compounds degraders without the E3-inhibitory activity, therefore, minimizing the interference with the physiological substrates of CRBN. Similarly, the CR8-CDK interaction can be weakened to uncouple the degrader function from the kinase inhibition. To mimic natural examples and reduce side effects, future development of MG degraders that lack the inhibitory activity should be considered.
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