de novo purine synthesis

从头嘌呤合成
  • 文章类型: Journal Article
    嘌呤核苷酸对于RNA和DNA合成至关重要,信令,新陈代谢,和能量稳态。要合成嘌呤,细胞使用两种主要途径:从头途径和救助途径。传统上,据认为,增殖细胞主要依赖于从头合成,而分化的组织倾向于挽救途径。出乎意料的是,我们发现腺嘌呤和肌苷是向组织和肿瘤提供嘌呤核苷酸的最有效的循环前体,而次黄嘌呤在体内快速分解代谢且回收不良。定量代谢分析证明了从头合成和补救途径在维持肿瘤中嘌呤核苷酸库方面的比较贡献。值得注意的是,喂食小鼠核苷酸加速肿瘤生长,而抑制嘌呤挽救减缓肿瘤进展,揭示了挽救途径在肿瘤代谢中的关键作用。这些发现为正常组织和肿瘤如何维持嘌呤核苷酸提供了基本见解,并强调了嘌呤补救在癌症中的重要性。
    Purine nucleotides are vital for RNA and DNA synthesis, signaling, metabolism, and energy homeostasis. To synthesize purines, cells use two principal routes: the de novo and salvage pathways. Traditionally, it is believed that proliferating cells predominantly rely on de novo synthesis, whereas differentiated tissues favor the salvage pathway. Unexpectedly, we find that adenine and inosine are the most effective circulating precursors for supplying purine nucleotides to tissues and tumors, while hypoxanthine is rapidly catabolized and poorly salvaged in vivo. Quantitative metabolic analysis demonstrates comparative contribution from de novo synthesis and salvage pathways in maintaining purine nucleotide pools in tumors. Notably, feeding mice nucleotides accelerates tumor growth, while inhibiting purine salvage slows down tumor progression, revealing a crucial role of the salvage pathway in tumor metabolism. These findings provide fundamental insights into how normal tissues and tumors maintain purine nucleotides and highlight the significance of purine salvage in cancer.
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  • 文章类型: Journal Article
    肿瘤细胞的能量需求极高,因此肿瘤细胞代谢的核心是能量代谢的管理。细胞中的嘌呤核苷酸合成途径使用嘌呤小体作为必需的空间结构复合物。除了在肿瘤的出现和生长中起着至关重要的调节作用之外,它有助于嘌呤核苷酸的合成和代谢。本文首先讨论了嘌呤在肿瘤细胞中代谢的重要性。然后回顾了嘌呤体作为前瞻性治疗靶标的作用,以及一系列在肿瘤代谢调节中起作用的信号通路。彻底了解嘌呤在控制肿瘤代谢中的功能可以为创建创新的癌症治疗方法提供新的建议。
    The core of tumor cell metabolism is the management of energy metabolism due to the extremely high energy requirements of tumor cells. The purine nucleotide synthesis pathway in cells uses the purinosomes as an essential spatial structural complex. In addition to serving a crucial regulatory role in the emergence and growth of tumors, it contributes to the synthesis and metabolism of purine nucleotides. The significance of purine metabolism in tumor cells is initially addressed in this current article. The role of purinosomes as prospective therapeutic targets is then reviewed, along with a list of the signaling pathways that play in the regulation of tumor metabolism. A thorough comprehension of the function of purinosomes in the control of tumor metabolism can generate fresh suggestions for the creation of innovative cancer treatment methods.
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  • 文章类型: Journal Article
    通过在应激条件下分隔DNPS酶,嘌呤体充当代谢物以增强从头嘌呤合成(DNPS)效率。然而,支撑purinosome组装及其病理生理功能的机制仍然难以捉摸。这里,我们表明,通过cullin-5/ankyrin重复和包含11(Cul5/ASB11)的SOCS盒,DNPS酶磷酸核糖氨基咪唑羧化酶和磷酸核糖氨基咪唑羧化酶(PAICS)的K6-聚泛素化在嘌呤小体组装中起驱动作用。根据几个诱导嘌呤的线索,ASB11通过缓解H3K9me3/HP1α介导的转录沉默而上调,从而刺激PAICS聚泛素化。多泛素化PAICS招募泛素相关蛋白2(UBAP2),一种泛素结合蛋白,具有多个内在无序区域,从而诱导相分离以触发嘌呤体组装以增强DNPS途径通量。在人类黑色素瘤中,ASB11高表达以促进组成型嘌呤体形成,使黑色素瘤细胞成瘾以支持其增殖,生存能力,和异种移植模型中的肿瘤发生。我们的研究确定了purinosome组装响应细胞压力的驱动机制,并揭示了purinosome形成对人类恶性肿瘤的影响。
    Purinosomes serve as metabolons to enhance de novo purine synthesis (DNPS) efficiency through compartmentalizing DNPS enzymes during stressed conditions. However, the mechanism underpinning purinosome assembly and its pathophysiological functions remains elusive. Here, we show that K6-polyubiquitination of the DNPS enzyme phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthetase (PAICS) by cullin-5/ankyrin repeat and SOCS box containing 11 (Cul5/ASB11)-based ubiquitin ligase plays a driving role in purinosome assembly. Upon several purinosome-inducing cues, ASB11 is upregulated by relieving the H3K9me3/HP1α-mediated transcriptional silencing, thus stimulating PAICS polyubiquitination. The polyubiquitinated PAICS recruits ubiquitin-associated protein 2 (UBAP2), a ubiquitin-binding protein with multiple stretches of intrinsically disordered regions, thereby inducing phase separation to trigger purinosome assembly for enhancing DNPS pathway flux. In human melanoma, ASB11 is highly expressed to facilitate a constitutive purinosome formation to which melanoma cells are addicted for supporting their proliferation, viability, and tumorigenesis in a xenograft model. Our study identifies a driving mechanism for purinosome assembly in response to cellular stresses and uncovers the impact of purinosome formation on human malignancies.
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  • 文章类型: Journal Article
    肿瘤细胞需要经历代谢重编程以快速发育和进展,癌细胞的代谢特征之一是核苷酸的过度合成和利用。异常增加的核苷酸及其代谢物不仅直接加速肿瘤细胞的进展,而且还通过旁分泌方式间接作用于肿瘤微环境(TME)中的基质细胞以调节肿瘤的进展。嘌呤核苷酸主要通过肿瘤细胞中的从头核苷酸合成产生;因此,干预它们的合成已成为抗肿瘤治疗中一种有前途的策略。从头嘌呤合成是由六种酶催化的10步反应,以合成肌苷5-单磷酸(IMP)并随后合成AMP和GMP。磷酸核糖基氨基咪唑羧化酶/磷酸-bossylaminamino咪唑琥珀羧酰胺合成酶(PAICS)是催化从头嘌呤合成的双功能酶。各种肿瘤中PAICS表达异常升高与不良预后相关。有证据表明,PAICS及其催化产物,N-琥珀酰甲酰胺-5-氨基咪唑核糖核苷酸(SAICAR),抑制肿瘤细胞凋亡,促进肿瘤细胞生长,上皮-间质转化(EMT),入侵,和转移通过调节信号通路如丙酮酸激酶M2(PKM2),细胞外信号相关激酶1和2(ERK1/2),粘着斑激酶(FAK)等。这篇综述总结了结构,PAICS在癌症发展中的生物学功能和分子机制,并讨论其作为肿瘤治疗靶点的潜力。
    Tumor cells are required to undergo metabolic reprogramming for rapid development and progression, and one of the metabolic characteristics of cancer cells is the excessive synthesis and utilization of nucleotides. Abnormally increased nucleotides and their metabolites not only directly accelerate tumor cell progression but also indirectly act on stromal cells in the tumor microenvironment (TME) via a paracrine manner to regulate tumor progression. Purine nucleotides are mainly produced via de novo nucleotide synthesis in tumor cells; therefore, intervening in their synthesis has emerged as a promising strategy in anti-tumor therapy. De novo purine synthesis is a 10-step reaction catalyzed by six enzymes to synthesize inosine 5-monophosphate (IMP) and subsequently synthesize AMP and GMP. Phosphoribosylaminoimidazole carboxylase/phosphori-bosylaminoimidazole succinocarboxamide synthetase (PAICS) is a bifunctional enzyme that catalyzes de novo purine synthesis. Aberrantly elevated PAICS expression in various tumors is associated with poor prognosis. Evidence suggests that PAICS and its catalytic product, N-succinylcarboxamide-5-aminoimidazole ribonucleotide (SAICAR), could inhibit tumor cell apoptosis and promote the growth, epithelial-mesenchymal transition (EMT), invasion, and metastasis by regulating signaling pathways such as pyruvate kinase M2 (PKM2), extracellular signal-related kinases 1 and 2 (ERK1/2), focal adhesion kinase (FAK) and so on. This review summarizes the structure, biological functions and the molecular mechanisms of PAICS in cancer development and discusses its potential to be a target for tumor therapy.
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  • 文章类型: Journal Article
    血管平滑肌细胞(VSMC)的增殖是动脉疾病的标志,尤其是血管成形术或支架置入后的动脉再狭窄。VSMC重新编程它们的代谢以满足增加的脂质需求,蛋白质,和核苷酸的增殖。从头嘌呤合成是核苷酸合成的关键途径之一。然而,其在这些动脉疾病中VSMC增殖中的作用尚未确定。
    通过液相色谱-串联质谱法评估增殖性VSMC中的从头嘌呤合成。ATIC(5-氨基咪唑-4-甲酰胺核糖核苷酸甲酰基转移酶/肌苷一磷酸环水解酶)的表达,从头嘌呤合成途径最后两步中的关键双功能酶,在增生性动脉新内膜的VSMC中进行评估。产生Atic小鼠的全局和VSMC特异性敲除,并用于检查ATIC相关嘌呤代谢在动脉新内膜和动脉粥样硬化病变形成中的作用。
    在这项研究中,我们发现在增殖性VSMC中嘌呤从头合成增加。嘌呤合成上调基因,包括ATIC,在小鼠和人类的受伤血管和动脉粥样硬化病变的新内膜中观察到。VSMC中Atic的全局或特异性敲除抑制细胞增殖,在小鼠动脉粥样硬化和动脉再狭窄模型中减弱动脉新生内膜。
    这些结果表明嘌呤从头合成在动脉疾病的VSMC增殖中起重要作用。这些发现表明靶向ATIC是对抗动脉疾病的有希望的治疗方法。
    Proliferation of vascular smooth muscle cells (VSMCs) is a hallmark of arterial diseases, especially in arterial restenosis after angioplasty or stent placement. VSMCs reprogram their metabolism to meet the increased requirements of lipids, proteins, and nucleotides for their proliferation. De novo purine synthesis is one of critical pathways for nucleotide synthesis. However, its role in proliferation of VSMCs in these arterial diseases has not been defined.
    De novo purine synthesis in proliferative VSMCs was evaluated by liquid chromatography-tandem mass spectrometry. The expression of ATIC (5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/inosine monophosphate cyclohydrolase), the critical bifunctional enzyme in the last 2 steps of the de novo purine synthesis pathway, was assessed in VSMCs of proliferative arterial neointima. Global and VSMC-specific knockout of Atic mice were generated and used for examining the role of ATIC-associated purine metabolism in the formation of arterial neointima and atherosclerotic lesions.
    In this study, we found that de novo purine synthesis was increased in proliferative VSMCs. Upregulated purine synthesis genes, including ATIC, were observed in the neointima of the injured vessels and atherosclerotic lesions both in mice and humans. Global or specific knockout of Atic in VSMCs inhibited cell proliferation, attenuating the arterial neointima in models of mouse atherosclerosis and arterial restenosis.
    These results reveal that de novo purine synthesis plays an important role in VSMC proliferation in arterial disease. These findings suggest that targeting ATIC is a promising therapeutic approach to combat arterial diseases.
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  • 文章类型: Case Reports
    背景:AICA(5-氨基咪唑-4-甲酰胺)ribosiduria是嘌呤生物合成中的先天性错误,是由于位于染色体2q35上的5-氨基咪唑-4-甲酰胺核糖核苷酸-甲酰转移酶/imp环水解酶(ATIC)基因的双等位基因致病变体引起的。ATIC编码了一种双功能酶,AICAR转化酶和肌苷一磷酸(IMP)环水解酶,催化嘌呤从头合成的最后两步。这种疾病以前在全球仅有4例报道,在这里,我们报道第一个来自印度。
    方法:呈现全球发育迟缓的先证者,发育性髋关节发育不良(DDH),无花性心脏病和眼球震颤样眼球运动。全外显子组测序(WES)鉴定了ATIC中的复合杂合致病变体。一种新的剪接位点变体;c.1321-2A>G和先前报道的错义变体;c.127A>G(p。Lys426Arg)被鉴定。父母的分离分析表明,父亲是剪接位点变异的杂合携带者,母亲,错义变体的杂合载体。
    结论:这种罕见的ATIC缺乏症嘌呤生物合成遗传疾病是印度报道的首例病例。早期诊断导致早期介入治疗和遗传咨询。
    BACKGROUND: AICA (5-aminoimidazole-4-carboxamide) ribosiduria is an inborn error in purine biosynthesis caused due to biallelic pathogenic variants in the 5-aminoimidazole-4-carboxamide ribonucleotide-formyltransferase/imp cyclohydrolase (ATIC) gene located on chromosome 2q35. ATIC codes for a bifunctional enzyme, AICAR transformylase and inosine monophosphate (IMP) cyclohydrolase, which catalyse the last two steps of de novo purine synthesis. This disorder has been previously reported in only 4 cases worldwide, and herein, we report the first from India.
    METHODS: The proband presented with global developmental delay, developmental hip dysplasia (DDH), acyanotic heart disease and nystagmoid eye movements. Whole exome sequencing (WES) identified compound heterozygous pathogenic variants in the ATIC. A novel splice site variant; c.1321-2A > G and a previously reported missense variant; c.1277A > G (p.Lys426Arg) were identified. Segregation analysis of parents showed the father to be a heterozygous carrier for the splice site variant and the mother, a heterozygous carrier for the missense variant.
    CONCLUSIONS: This case of a rare genetic disorder of purine biosynthesis of ATIC deficiency is the first case reported from India. Early diagnosis lead to early interventional therapy and genetic counselling.
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  • 文章类型: Journal Article
    细胞代谢改变是癌细胞生物学的标志,和癌细胞的适应性代谢策略最近引起了许多研究小组的兴趣。代谢重编程已被确定为神经胶质细胞转化的关键步骤,并且已经研究了抗代谢物对胶质母细胞瘤的使用。一碳(1-C)代谢及其相关的生物合成途径,特别是嘌呤核苷酸合成,对于快速增殖至关重要,并且在许多癌症中都发生了改变。嘌呤代谢也已被确定为神经胶质瘤肿瘤发生所必需的。此外,已确定1-C介导的嘌呤合成的改变通常存在于脑肿瘤起始细胞(BTIC)中,并且可以作为负责肿瘤复发的细胞的表型标记。需要进一步的研究来阐明BTIC中可能出现代谢脆弱性的机制以及治疗靶向这些代谢过程的潜在方法。这篇综述旨在总结1-C代谢相关漏洞在胶质母细胞瘤肿瘤发生和发展中的作用,并探讨靶向该途径与其他治疗策略的治疗潜力。
    Altered cell metabolism is a hallmark of cancer cell biology, and the adaptive metabolic strategies of cancer cells have been of recent interest to many groups. Metabolic reprogramming has been identified as a critical step in glial cell transformation, and the use of antimetabolites against glioblastoma has been investigated. One-carbon (1-C) metabolism and its associated biosynthetic pathways, particularly purine nucleotide synthesis, are critical for rapid proliferation and are altered in many cancers. Purine metabolism has also been identified as essential for glioma tumourigenesis. Additionally, alterations of 1-C-mediated purine synthesis have been identified as commonly present in brain tumour initiating cells (BTICs) and could serve as a phenotypic marker of cells responsible for tumour recurrence. Further research is required to elucidate mechanisms through which metabolic vulnerabilities may arise in BTICs and potential ways to therapeutically target these metabolic processes. This review aims to summarize the role of 1-C metabolism-associated vulnerabilities in glioblastoma tumourigenesis and progression and investigate the therapeutic potential of targeting this pathway in conjunction with other treatment strategies.
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  • 文章类型: Journal Article
    条块分割对于多层次的生物系统至关重要,包括新陈代谢中的生化反应。基于细胞器的区室,如线粒体和过氧化物酶体隔离负责的酶,提高新陈代谢的效率,同时保护细胞免受危险的中间体,如自由基氧。最近的研究表明细胞内的核苷酸,如ATP和GTP,在层状和丝状突起处高浓度的细胞中异质分布,或前沿。然而,嘌呤核苷酸酶的细胞内分布仍不清楚。这里,我们报道了GTP生物合成酶的增强定位,包括肌苷一磷酸脱氢酶(IMPDH同种型1和2),GMP合成酶(GMPS),鸟苷酸激酶(GUK1)和核苷二磷酸激酶-A(NDPK-A)在肾细胞癌细胞中处于前沿。它们在膜亚结构域显示出显著的共定位,它们在细胞膜上的共定位模式与细胞体不同。而其他嘌呤核苷酸生物合成酶也显示出显著的定位在前沿,它们与IMPDH的共同定位模式是不同的。相比之下,一种关键的糖酵解酶,甘油醛-3-磷酸脱氢酶(GAPDH),主要位于细胞质中。机械上,我们发现IMPDH同工酶的质膜定位需要活性肌动蛋白聚合。我们的结果表明,在前缘形成了局部嘌呤生物合成的离散代谢区室,这可能促进局部核苷酸代谢,用于癌症中的细胞迁移和转移。
    Compartmentalization is vital for biological systems at multiple levels, including biochemical reactions in metabolism. Organelle-based compartments such as mitochondria and peroxisomes sequester the responsible enzymes and increase the efficiency of metabolism while simultaneously protecting the cell from dangerous intermediates, such as radical oxygen species. Recent studies show intracellular nucleotides, such as ATP and GTP, are heterogeneously distributed in cells with high concentrations at the lamellipodial and filopodial projections, or leading edge. However, the intracellular distribution of purine nucleotide enzymes remains unclear. Here, we report the enhanced localization of GTP-biosynthetic enzymes, including inosine monophosphate dehydrogenase (IMPDH isotype 1 and 2), GMP synthase (GMPS), guanylate kinase (GUK1) and nucleoside diphosphate kinase-A (NDPK-A) at the leading edge in renal cell carcinoma cells. They show significant co-localization at the membrane subdomain, and their co-localization pattern at the membrane is distinct from that of the cell body. While other purine nucleotide biosynthetic enzymes also show significant localization at the leading edge, their co-localization pattern with IMPDH is divergent. In contrast, a key glycolytic enzyme, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), predominantly localized in the cytoplasm. Mechanistically, we found that plasma membrane localization of IMPDH isozymes requires active actin polymerization. Our results demonstrate the formation of a discrete metabolic compartment for localized purine biosynthesis at the leading edge, which may promote localized nucleotide metabolism for cell migration and metastasis in cancers.
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  • 文章类型: Journal Article
    Human inosine 5\'-monophosphate dehydrogenase 2 (hIMPDH2), being an age-old target, has attracted attention recently for anticancer drug development. Mycophenolic acid (MPA), a well-known immunosuppressant drug, was used a lead structure to design and develop modestly potent and selective analogues. The steep structure-activity relationship (SAR) requirements of the lead molecule left little scope to synthesise newer analogues. Here, newer MPA amides were designed, synthesised and evaluated for hIMPDH2 inhibition and cellular efficacy in breast, prostate and glioblastoma cell lines. Few title compounds exhibited cellular activity profile better than MPA itself. The observed differences in the overall biological profile could be attributed to improved structural and physicochemical properties of the analogues over MPA. This is the first report of the activity of MPA derivatives in glioblastoma, the most aggressive brain cancer.
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  • 文章类型: Journal Article
    嘌呤是核酸合成的必需分子,是所有生物体中最常见的化学能载体。嘌呤的细胞库通过从头合成(DNPS)之间的平衡来维持,回收和降解。DNPS包括由六种酶催化的十个反应。迄今为止,已经描述了两种由基因决定的DNPS酶紊乱,和其他缺陷的存在表现为神经症状和DNPS中间体在体液中的积累是高度可推测的。在目前的研究中,我们制备了特定的重组DNPS酶,并将其用于其商业上不可用的底物的生化制备。这些化合物用作开发和验证定量液相色谱-串联质谱(LC-MS/MS)的标准品。为了模拟DNPS的已知和推定缺陷的表现,我们准备了CRISPR-Cas9基因组编辑的HeLa细胞,这些细胞缺乏DNPS(CR细胞)的各个步骤,评估了细胞裂解物和生长培养基中的底物积累,并测试了突变如何影响嘌呤体的组装,DNPS酶的多酶复合物。在所有模型细胞系中,除了一个,鉴定了敲除酶的底物的积累。形成嘌呤体的能力降低。我们得出的结论是,体液中DNPS酶的去磷酸化底物的LC-MS/MS分析可用于选择性筛选已知和推定的DNPS疾病。在病因不明的神经和神经肌肉表现的受影响个体中应考虑这种方法。制备的体外人体模型系统可用于各种研究,旨在更好地表征和理解DNPS的生理学和病理学。研究每种DNPS蛋白在嘌呤体形成中的作用,并代表筛选潜在治疗剂的有趣方法。
    Purines are essential molecules for nucleic acid synthesis and are the most common carriers of chemical energy in all living organisms. The cellular pool of purines is maintained by the balance between their de novo synthesis (DNPS), recycling and degradation. DNPS includes ten reactions catalysed by six enzymes. To date, two genetically determined disorders of DNPS enzymes have been described, and the existence of other defects manifested by neurological symptoms and the accumulation of DNPS intermediates in bodily fluids is highly presumable. In the current study, we prepared specific recombinant DNPS enzymes and used them for the biochemical preparation of their commercially unavailable substrates. These compounds were used as standards for the development and validation of quantitative liquid chromatography-tandem mass spectrometry (LC-MS/MS). To simulate manifestations of known and putative defects of DNPS we prepared CRISPR-Cas9 genome-edited HeLa cells deficient for the individual steps of DNPS (CR-cells), assessed the substrates accumulation in cell lysates and growth media and tested how the mutations affect assembly of the purinosome, the multi-enzyme complex of DNPS enzymes. In all model cell lines with the exception of one, an accumulation of the substrate(s) for the knocked out enzyme was identified. The ability to form the purinosome was reduced. We conclude that LC-MS/MS analysis of the dephosphorylated substrates of DNPS enzymes in bodily fluids is applicable in the selective screening of the known and putative DNPS disorders. This approach should be considered in affected individuals with neurological and neuromuscular manifestations of unknown aetiology. Prepared in vitro human model systems can serve in various studies that aim to provide a better characterization and understanding of physiology and pathology of DNPS, to study the role of each DNPS protein in the purinosome formation and represent an interesting way for the screening of potential therapeutic agents.
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