d(S)

d (S)
  • 文章类型: Journal Article
    毒液由于其强大的生理效应和动态进化而引起了极大的关注,包括用于毒液表达的同源基因的趋同募集。在这里,我们为甲壳动物高血糖激素(CHH)和节肢动物离子运输肽(ITP)超家族招募基因以在黑寡妇蜘蛛中表达毒液提供了新的证据。我们从西方黑寡妇蜘蛛(Latrodectushesperus)的毒腺cDNA中鉴定了latrodectin肽,棕色寡妇(Latrodectusgeometricus)和橱柜蜘蛛(Steatodagrossa)。这些序列与其他蜘蛛同源物的系统发育分析,蝎子和黄蜂毒液cDNA,以及CHH/ITP神经肽,将latrodectin显示为CHH/ITP超家族的衍生成员。这些分析表明,CHH/ITP同源物在蜘蛛毒液中更广泛,并招募了另外两个节肢动物谱系的毒液表达。我们还发现latrodectin2基因和几乎所有的CHH/ITP基因在同一位置包含2相内含子,支持latrodectin在CHH/ITP超家族中的放置。latrodectin的进化分析表明,沿某些序列谱系的阳性选择发作,以及特定密码子的阳性和纯化选择,支持其在寡妇毒液中的功能重要性。我们考虑这种对latrodectin进化的改进理解如何为其在黑寡妇毒液中的作用以及其在节肢动物中毒液表达的潜在趋同招募提供功能假设。
    Venoms have attracted enormous attention because of their potent physiological effects and dynamic evolution, including the convergent recruitment of homologous genes for venom expression. Here we provide novel evidence for the recruitment of genes from the Crustacean Hyperglycemic Hormone (CHH) and arthropod Ion Transport Peptide (ITP) superfamily for venom expression in black widow spiders. We characterized latrodectin peptides from venom gland cDNAs from the Western black widow spider (Latrodectus hesperus), the brown widow (Latrodectus geometricus) and cupboard spider (Steatoda grossa). Phylogenetic analyses of these sequences with homologs from other spider, scorpion and wasp venom cDNAs, as well as CHH/ITP neuropeptides, show latrodectins as derived members of the CHH/ITP superfamily. These analyses suggest that CHH/ITP homologs are more widespread in spider venoms, and were recruited for venom expression in two additional arthropod lineages. We also found that the latrodectin 2 gene and nearly all CHH/ITP genes include a phase 2 intron in the same position, supporting latrodectin\'s placement within the CHH/ITP superfamily. Evolutionary analyses of latrodectins suggest episodes of positive selection along some sequence lineages, and positive and purifying selection on specific codons, supporting its functional importance in widow venom. We consider how this improved understanding of latrodectin evolution informs functional hypotheses regarding its role in black widow venom as well as its potential convergent recruitment for venom expression across arthropods.
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  • 文章类型: Journal Article
    Ťahyňa virus (TAHV), a member of the Bunyaviridae family (California complex), is an important but neglected human mosquito-borne pathogen. The virus genome is composed of three segments, i.e., small (S), medium (M), and large (L). Previous studies on genetic variability of viruses within the California complex were focused on S and M segments, but the L segment remains relatively unstudied. To assess the genetic variation and the relation to virus phenotype we analyzed the L segment sequences of biologically diverse TAHV strains isolated in the Czech Republic and Slovakia. Phylogenetic analysis covering all available sequences of the L segment of TAHV clearly revealed two distinguished lineages, tentatively named as \"European\" and \"Asian\". The L segment strains within the European lineage are highly conserved (identity 99.3%), whilst Asian strains are more genetically diverse (identity 97%). Based on sequence comparison with other bunyaviruses, several non-synonymous nucleotide substitutions unique for TAHV in the L segment were identified. We also identified specific residue substitutions in the endonuclease domain of TAHV compared with the La Crosse virus. Since the endonuclease domain of the La Crosse virus has been resolved, we employed an all energy landscape algorithm to analyze the ligand migration of a viral polymerase inhibitor. This allowed us to demonstrate, at the atomic level, that this viral polymerase inhibitor randomly explored the specific residue substitutions in the endonuclease domain of the TAHV L segment.
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  • 文章类型: Journal Article
    开发了一种新颖而强大的分布式底栖微生物燃料电池(DBMFC),以解决海洋学传感器网络应用的能源供应问题。特别是在水生生物的冲刷和生物扰动下。DBMFC系统中采用了多阳极/阴极配置,以增强恶劣海洋环境中的鲁棒性和稳定性。结果表明,DBMFC系统的峰值功率和电流密度分别为190mW/m(2)和125mA/m(2)。稳定性表征测试表明,具有多个阳极的DBMFC比具有单个阳极的系统实现了更高的发电量。一个计算模型,集成物理,MFC的电化学和生物因子被开发来验证DBMFC系统的整体性能。模型模拟与实验结果吻合良好,并证实了使用多阳极/阴极MFC配置导致可靠和稳健的发电的假设。
    A novel and robust distributed benthic microbial fuel cell (DBMFC) was developed to address the energy supply issues for oceanographic sensor network applications, especially under scouring and bioturbation by aquatic life. Multi-anode/cathode configuration was employed in the DBMFC system for enhanced robustness and stability in the harsh ocean environment. The results showed that the DBMFC system achieved peak power and current densities of 190mW/m(2) and 125mA/m(2) respectively. Stability characterization tests indicated the DBMFC with multiple anodes achieved higher power generation over the systems with single anode. A computational model that integrated physical, electrochemical and biological factors of MFCs was developed to validate the overall performance of the DBMFC system. The model simulation well corresponded with the experimental results, and confirmed the hypothesis that using a multi anode/cathode MFC configuration results in reliable and robust power generation.
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  • 文章类型: Journal Article
    In this study, the association between MH-DAB gene polymorphism and disease resistance was evaluated by challenging grass carp (Ctenopharyngodon idellus) with Flavobacterium columnare. Eight genotypes and six alleles were found, and named by common nomenclature. The genotypes AA, BB, EE, and DE, and the alleles Ctid-DAB1*0101, Ctid-DAB1*0201 and Ctid-DAB1*0401 were more preponderant in fish. The genotype BB was associated with higher resistance to F. columnare, as well as two alleles Ctid-DAB*0101 and Ctid-DAB*0201. Allele Ctid-DAB*0102 has decreased resistance to F. columnare. The expression of MH-DAB gene was decreased in the liver, kidney, and intestine but not in the spleen, gill, and skin at 2 days post infection (dpi), versus to that in the control group. MH-DAB gene expression was up-regulated in most tissues but remained at normal levels in the intestine at 15 days post infection. Our data suggested that MH-DAB polymorphism can be used as a potential genetic marker for disease resistance breeding of grass carp in the future.
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