colonized

定殖
  • 文章类型: Journal Article
    背景技术医疗设施中多药耐药(MDR)生物体尤其是革兰氏阴性菌(GNB)的发病率的增加是引起关注的严重原因。这项研究确定了这些MDRGNB感染的危险因素,如鲍曼不动杆菌,肺炎克雷伯菌,铜绿假单胞菌,和大肠杆菌,以告知医护人员有关其遏制策略。方法在三甲医院进行病例对照研究,将100例因MDRGNB引起的医疗保健相关感染(入院后48小时出现感染)的患者与两个对照组进行比较。即,100例由非MDRGNB(不符合MDR标准)引起的医疗保健相关感染患者和100例未由GNB引起的感染患者。MDR细菌被定义为对三种或更多种抗生素中的至少一种抗生素不敏感的细菌。使用描述性统计(分类变量的频率和百分比)分析数据。进行多因素回归分析以确定MDRGNB的重要预测因子。计算95%置信区间的赔率比,并且在p值<0.05时确定显著性水平。结果在4个月内(2015年1-4月)共分离到332例患者中的388株生物。56(17%)的患者感染了一种以上的生物体。在MDR细菌中,最主要的MDR生物是鲍曼不动杆菌(38%),其次是K。肺炎(31%),铜绿假单胞菌(20%),和大肠杆菌(11%)。在非MDR生物中,最主要的是铜绿假单胞菌(47%),其次是大肠杆菌(32%),K.肺炎(18%),和鲍曼不动杆菌(3%)。MDR生物体患者与第一对照组(非MDR生物体患者)相比,显示先前使用抗生素(p值:0.001),重症监护病房(ICU)入院(p值:0.001),和留置医疗器械(p值:0.005)是MDR感染的重要危险因素。还发现,在第二对照组(未感染的患者)中,MDRGNB感染的危险因素相同:先前使用过抗生素(p值:0.002),ICU入院(p值:0.001),和留置医疗器械(p值:0.03)。根据两个对照组的比较,住院时间超过五天(p值:0.001),免疫抑制治疗(p值:0.02),60岁以上(p值:0.02)是非MDR感染的重要危险因素。结论本研究确定的危险因素可为医务人员预防和控制MDRGNB提供指导。
    Background The increase in the incidence of multidrug-resistant (MDR) organisms especially Gram-negative bacteria (GNB) in healthcare facilities is a serious cause of concern. This study identified risk factors for the infection with these MDR GNB, such as Acinetobacter baumannii, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Escherichia coli to inform healthcare workers about strategies for their containment. Methods A case-control study was carried out at a tertiary care hospital where 100 patients with healthcare-associated infections (infections arising 48 hours after admission) caused by MDR GNB were compared with two control groups, i.e., 100 patients with healthcare-associated infections caused by non-MDR GNB (not meeting the criteria of MDR) and 100 patients without infection caused by GNB. MDR bacteria were defined as the ones that were non-susceptible to at least one antibiotic in three or more classes of antibiotics. The data were analyzed using descriptive statistics (frequency and percentage of categorical variables). Multivariate regression analysis was undertaken to identify significant predictors of MDR GNB. Odds ratios with 95% confidence intervals were calculated, and the level of significance was determined at p-value < 0.05. Results A total of 388 organisms were isolated during four months (January-April 2015) from 332 patients. Fifty-six (17%) of the patients were infected with more than one organism. Among the MDR bacteria, the most dominant MDR organism was A. baumannii (38%), followed by K. pneumoniae (31%), P. aeruginosa (20%), and E. coli (11%). Among the non-MDR organisms, the most dominant was P. aeruginosa (47%), followed by E. coli (32%), K. pneumoniae (18%), and A. baumannii (3%). Patients with MDR organisms compared with the first control group (patients with non-MDR organisms) showed that prior antibiotic use (p-value: 0.001), intensive care unit (ICU) admission (p-value: 0.001), and indwelling medical devices (p-value: 0.005) were significant risk factors for MDR infections. It was also found that the risk factors for MDR GNB infection were the same in the second control group (patients without infection): prior antibiotic use (p-value: 0.002), ICU admission (p-value: 0.001), and indwelling medical devices (p-value: 0.03). Based on the comparison of the two control groups, prolonged hospital stays of more than five days (p-value: 0.001), immunosuppressive therapy (p-value: 0.02), and over 60 years of age (p-value: 0.02) were significant risk factors for non-MDR infection. Conclusion  The risk factors identified in our study provide guidance to healthcare workers for the prevention and containment of MDR GNB.
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  • 文章类型: Journal Article
    在这项研究中,我们的目的是调查耐甲氧西林金黄色葡萄球菌(MRSA)和耐甲氧西林假中介葡萄球菌(MRSP)临床分离株的分子流行病学,以及在犬和猫中的定植分离株,以分析与其分离相关的影响因素.在2015年至2017年之间,从狗和猫身上收集了鼻腔和直肠样本,以鉴定定殖分离株。从昆士兰大学兽医诊断实验室检索了2003年至2016年之间收集的临床分离株。使用标准微生物学和分子方法鉴定所有分离物,并通过全基因组测序进行表征。研究了系统发育关系和流行病学因素的差异。在1,460个定殖样品中鉴定出72个MRSP分离株和9个MRSP临床分离株。没有分离出MRSA。ST496和ST749是具有不同SCCmec类型的最常见的分离序列类型。ST496克隆在沿海和更多的内陆传播,ST749更集中在布里斯班。两种序列类型之间的抗性和毒力因子显着不同。ST496定殖和临床分离株具有类似的多重耐药性。ST749定殖和临床分离株的毒力基因相似,因为两者都包含唾液酸酶的nanB基因。主要序列类型之间的个体和临床因素没有差异。大多数分离株出现高水平的抗菌素耐药性,这是人类和兽医健康的潜在关注。来自本研究的分离株和先前在国家/地区确定的其他分离株的系统发育聚类,尤其是新西兰,澳大利亚有大量的宠物运动可能暗示克隆的进口,这需要进一步调查。
    In this study, we aimed to investigate the molecular epidemiology of methicillin-resistant Staphylococcus aureus (MRSA) and methicillin-resistant Staphylococcus pseudintermedius (MRSP) clinical and colonizing isolates of dogs and cats to profile contributing factors associated with their isolation. Nasal and rectal samples were collected from dogs and cats between 2015 and 2017 to identify colonizing isolates. Clinical isolates collected between 2003 and 2016 were retrieved from a Queensland university veterinary diagnostic laboratory. All isolates were identified using standard microbiological and molecular methods and were characterized by whole genome sequencing. Phylogenetic relationships and differences in epidemiological factors were investigated. Seventy-two MRSP isolates out of 1,460 colonizing samples and nine MRSP clinical isolates were identified. No MRSA was isolated. ST496 and ST749 were the most commonly isolated sequence types with different SCCmec types. ST496 clones spread both along the coast and more inland where ST749 was more centered in Brisbane. The resistance and virulence factors differed significantly between the two sequence types. ST496 colonizing and clinical isolates were similarly multidrug resistant. The virulence genes of ST749 colonizing and clinical isolates were similar as both contained the gene nanB for sialidase. There were no differences in the individual and clinical factors between predominant sequence types. High levels of antimicrobial resistance occurred in the majority of isolates, which is of potential concern to human and veterinary health. The phylogenetic clustering of isolates from this study and others previously identified in countries, particularly New Zealand, with which Australia has high volume of pet movements could suggest the importation of clones, which needs further investigation.
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  • 文章类型: Journal Article
    Our goal was to optimize infection control of paired environmental control interventions within hospitals to reduce methicillin-resistant Staphylococcus aureus (MRSA), carbapenem-resistant Enterobacteriaceae (CRE), and vancomycin-resistant Enterococci (VRE).
    The most widely used infection control interventions are deployment of handwashing (HW) stations, control of relative humidity (RH), and negative pressure (NP) treatment rooms. Direct costs of multidrug-resistant organism (MDRO) infections are typically not included in the design of such interventions.
    We examined the effectiveness of pairing HW with RH and HW with NP. We used the following three data sets: A meta-analysis of progression rates from uncolonized to colonized to infected, 6 years of MDRO treatment costs from 400 hospitals, and 8 years of MDRO incidence rates at nine army hospitals. We used these data as inputs into an Infection De-Escalation Model with varying budgets to obtain optimal intervention designs. We then computed the infection and prevention rates and cost savings resulting from these designs.
    The average direct cost of an MDRO infection was $3,289, $1,535, and $1,067 for MRSA, CRE, and VRE. The mean annual incidence rates per facility were 0.39%, 0.034%, and 0.011% for MRSA, CRE, and VRE. After applying the cost-minimizing intervention pair to each scenario, the percentage reductions in infections (and annual direct cost savings) in large, community, and small acute care hospitals were 69% ($1.5 million), 73% ($631K), 60% ($118K) for MRSA, 52% ($460.5K), 58% ($203K), 50% ($37K) for CRE, and 0%, 0%, and 50% ($12.8K) for VRE.
    The application of this Infection De-Escalation Model can guide cost-effective decision making in hospital built environment design to improve control of MDRO infections.
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    文章类型: Journal Article
    UNASSIGNED: Colonization of Candida species is common in pediatric patients admitted to hematology-oncology wards. The aim of this study was to identify colonized Candida species and their susceptibility patterns in hematologic pediatric patients.
    UNASSIGNED: Samples were collected from mouth, nose, urine and stool of the patients admitted to five university hospitals and cultured on sabouraud dextrose agar. The isolates were identified by API 20 C AUX system and their susceptibility patterns were evaluated by CLSI M27-A3 and S4.
    UNASSIGNED: From 650 patients, 320 (49.2%) were colonized with 387 Candida species. Candida albicans was the most prevalent isolated species, followed by Candida glabrata, Candida tropicalis, Candida famata, Candida kefyr and Candida kuresi. The epidemiological cut off value (ECV) for all Candida species to amphotericin B was ≤0.25 μg except C. krusei (4 μg). The resistance rate to fluconazole in this study in C. albicans was 4.9% with ECV 8 μg/ml, followed by C. tropicalis 8.8% with ECV 0.5 μg/ml. Voriconazole and posaconazole were effective antifungal agents for all Candida isolates. The ECV of C. albicans, Candida parapsilosis, C. tropicalis, C. glabrata and C. krusei for itraconazole were 0.5, 0.25, 0.5, 1 and 2 μg, respectively. The resistant and intermediate rates of Candida species to caspofungin in this study were 2.9%, 5.9%, 18.8%, 47.9%, 0.0% and 16.7% in C. tropicalis, C. glabrata and C. parapsilosis respectively.
    UNASSIGNED: C. albicans was the most prevalent species in pediatric colonized patients. New azole agents like voriconazole and posaconazole are effective against non-albicans Candida species. Increase in intermediate species is alarming to future emerging resistant species.
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