coexistence

共存
  • 文章类型: Journal Article
    由于预算限制和这些偏远环境中研究的挑战性,高海拔地区的人与野生动物冲突研究很少见。这项研究调查了尼泊尔山区Gaurishankar保护区(GCA)的人与野生动物冲突(HWC)的患病率和增加趋势,特别关注豹子(Pantherapardus)和喜马拉雅黑熊(Ursusthibetanuslaniger)。该研究分析了十年的HWC报告,并将山羊确定为豹子最关注的牲畜。GCA的Dolakha区收到的报告最多,强调在该地区采取缓解措施的必要性。在GCA,牲畜袭击占赔偿的85%,剩下的15%是人为伤害。我们估计报告的野生动物袭击事件平均每年增长33%,在BS2076(2019年)期间实施新的补偿政策后,每年额外增加57份报告。虽然熊袭击显示规则改变后没有显著变化,豹子攻击报告每年从1个激增到60个,表明补偿的改善可能导致豹子攻击报告率的增加。研究结果强调了HWC对当地社区的经济影响,并提出了增加猎物数量等策略,促进社区教育和意识,加强替代生计选择,发展以社区为基础的保险计划,并实施安全的围栏(畜栏),以最大程度地减少冲突并促进和谐共处。这项研究解决了GCA等高海拔保护区HWC的知识差距,为保护利益相关者提供有价值的见解,并为生物多样性保护以及人类和野生动植物的福祉做出贡献。
    Human-wildlife conflict studies of high-altitude areas are rare due to budget constraints and the challenging nature of research in these remote environments. This study investigates the prevalence and increasing trend of human-wildlife conflict (HWC) in the mountainous Gaurishankar Conservation Area (GCA) of Nepal, with a specific focus on leopard (Panthera pardus) and Himalayan black bear (Ursus thibetanus laniger). The study analyzes a decade of HWC reports and identifies goats as the livestock most targeted by leopards. The Dolakha district of GCA received the highest number of reports, highlighting the need for mitigation measures in the area. In GCA, livestock attacks accounted for 85% of compensation, with the remaining 15% for human injuries. We estimate that the number of reported wildlife attacks grew on average by 33% per year, with an additional increase of 57 reports per year following the implementation of a new compensation policy during BS 2076 (2019 AD). While bear attacks showed no significant change post-rule alteration, leopard attack reports surged from 1 to 60 annually, indicating improved compensation may have resulted in increased leopard-attack reporting rates. The findings emphasize the economic impact of HWC on local communities and suggest strategies such as increasing prey populations, promoting community education and awareness, enhancing alternative livelihood options, developing community-based insurance programs, and implementing secure enclosures (corrals) to minimize conflicts and foster harmonious coexistence. This research addresses a knowledge gap in HWC in high-altitude conservation areas like the GCA, providing valuable insights for conservation stakeholders and contributing to biodiversity conservation and the well-being of humans and wildlife.
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  • 文章类型: Case Reports
    肺隐球菌病(PC)是由新生隐球菌或加替隐球菌引起的常见机会性真菌感染。PC主要侵入呼吸系统,其次是中枢神经系统。很少有临床报告检查PC和肺癌的共存。本研究报告了一名54岁的具有免疫能力的PC患者的肺腺癌。胸部CT提示右肺多发结节,最大的结节位于右下叶的背侧段。18F-FDG正电子发射断层扫描计算机断层扫描(PET-CT)显示右下叶背段葡萄糖代谢升高,这表明肺癌。右下叶基底段和右上叶前段结节代谢水平无异常增高,但不能排除恶性肿瘤的可能性。同时通过电视胸腔镜手术(VATS)切除右下叶背段和基底段的肺结节,最终的组织病理学显示原发性肺腺癌和肺隐球菌感染,分别。手术后,抗真菌治疗3个月.在3年的随访中,对比增强计算机断层扫描(CT)显示两种疾病均未复发。该案例研究强调了在胸部CT上诊断多发肺结节的二元论的可能性,如肺癌与PC共存。对于不易通过穿刺活检诊断的微结节,建议进行手术切除;此外,早期诊断和治疗有助于确保良好的预后。本文报告1例右肺隐球菌感染合并肺腺癌患者的临床诊治情况。包括3年的随访,为临床实践提供参考。
    Pulmonary cryptococcosis (PC) is a common opportunistic fungal infection caused by Cryptococcus neoformans or Cryptococcus gattii. PC primarily invades the respiratory system, followed by the central nervous system. Few clinical reports have examined the coexistence of PC and lung cancer. This study reports the case of a 54-year-old immunocompetent PC patient with lung adenocarcinoma. Chest CT revealed multiple nodules in the right lung, with the largest nodule located in the dorsal segment of the right lower lobe. 18 F‑FDG positron emission tomography-computed tomography (PET-CT) revealed elevated glucose metabolism in the dorsal segment of the right lower lobe, which suggested lung cancer. The metabolism level of the nodule in the basal segment of the right lower lobe and the anterior segment of the right upper lobe was not abnormally increased, but the possibility of a malignant tumour could not be excluded. The pulmonary nodules in the dorsal segment and the basal segment of the right lower lobe were simultaneously resected via video-assisted thoracic surgery (VATS), and the final histopathology revealed primary lung adenocarcinoma and pulmonary cryptococcal infection, respectively. After surgery, antifungal treatment was administered for 3 months. Over the 3-year follow-up, contrast-enhanced computed tomography (CT) revealed no recurrence of either disease. This case study highlights the possibility of dualism in the diagnosis of multiple pulmonary nodules on chest CT, such as the coexistence of lung cancer and PC. Surgical resection is recommended for micronodules that are not easy to diagnose via needle biopsy; in addition, early diagnosis and treatment are helpful for ensuring a good prognosis. This paper reports the clinical diagnosis and treatment of one patient with pulmonary cryptococcal infection of the right lung complicated with lung adenocarcinoma, including 3 years of follow-up, providing a reference for clinical practice.
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  • 文章类型: Journal Article
    饮食专业化程度对悬浮饲养者的生态功能和相互作用具有根本影响。虽然食物粒度的生态位分化在专性悬浮饲养者中很常见,它的作用在兼性中并不明显。在这项研究中,我们的目标是通过关注同胞真菌物种来提供对此事的新见解。由于霉菌使用不同的机制进行猛禽和过滤喂养,它们代表了一个更充分的模型系统,更广泛研究的co足类动物。我们对4种共存的侵袭性Ponto-Caspian霉菌进行了形态学测量,以确定其过滤器的面积和网眼大小。我们还量化了它们在微藻Cryptomonassp上的清除率。在实验室实验中揭示形态差异如何体现在它们的整体过滤能力上。我们发现物种之间的初级过滤面积存在相对较小但一致的差异,表明由于刚毛的封闭位置而导致的形态限制可能会限制分化的可能性。在所有4种(0.69-2.73μm)中,主要的滤网尺寸都很小,具有中等但一致的种内差异,这表明能够捕获小颗粒的好处可能超过分化的压力。观察到的清除率与该物种的形态特征一致,强调辅助过滤器(存在于其中一个物种中,需要进行限制分析)以大大提高过滤能力。我们的研究证实,食物颗粒大小可以促进兼性滤食器的生态位分化,但也表明它们可以容忍比强制性的更高的重叠。观察到的差异与该物种的栖息地偏好和掠夺性潜力有关,这表明不同生态位轴线之间的互补性可能进一步促进它们的共存。
    The degree of dietary specialization has a fundamental impact on the ecological function and interactions of suspension feeders. While niche differentiation by food particle size is common among obligate suspension feeders, its role is not evident in facultative ones. In this study, we aimed at providing new insights on the matter by focusing on sympatric mysid species. As mysids use different mechanisms for raptorial and filter-feeding, they represent a more adequate model system than for example, the more extensively studied copepods. We made morphological measurements on the 4 coexisting invasive Ponto-Caspian mysid species to determine the areas and mesh sizes of their filters. We also quantified their clearance rates on the microalga Cryptomonas sp. in a laboratory experiment to reveal how morphological differences manifest in their overall filtering capacity. We found relatively small but consistent differences in the primary filter area among the species, indicating that morphological constraints due to the enclosed position of the setae might limit the possibility for differentiation. The primary filter mesh sizes were small in all 4 species (0.69-2.73 μm) with moderate but consistent intraspecific differences, suggesting that the benefit of being able to capture small particles might outweigh the pressure for differentiation. The observed clearance rates were in accordance with the morphological characteristics of the species, highlighting that auxiliary filters (present in one of the species, Limnomysis benedeni) are needed to increase filtering capacity considerably. Our study confirmed that food particle size can contribute to the niche differentiation of facultative filter feeders, but also indicated that they can tolerate a higher overlap than obligate ones. The observed differences were related to the habitat preferences and predatory potentials of the species, suggesting that complementarity among the different niche axes might further facilitate their coexistence.
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  • 文章类型: Journal Article
    尽管空间和营养都在竞争,细菌物种通常共存于结构化中,表面附着的群落称为生物膜。虽然这些社区发挥了重要作用,在生态系统中的广泛作用,是人类感染的媒介,了解多种细菌物种如何组装形成这些群落,以及支持多物种生物膜组成的物理过程仍然是一个活跃的研究领域。使用由铜绿假单胞菌组成的三物种群落模型,大肠杆菌,和粪肠球菌,我们用细胞尺度分辨率显示了占主导地位的社区成员的分散,铜绿假单胞菌,防止竞争排斥的发生,导致这三种物种共存。铜绿假单胞菌bqsS缺失突变体不再经历周期性的质量扩散,导致大肠杆菌的局部竞争性排斥。介绍定期,将非对称扩散行为转化为最小模型,仅由最大生长速率和局部密度参数化,支持这样一种直觉,即有偏见地分散否则占主导地位的竞争对手通常可以允许共存。定植实验表明,WT铜绿假单胞菌在定植新区域方面具有优势,与ΔbqsS相比,铜绿假单胞菌,但以当地对大肠杆菌和粪肠杆菌的竞争力下降为代价。总的来说,我们的实验记录了一个物种对竞争-分散-殖民权衡的调制如何继续影响空间结构生态系统中多物种共存的稳定性。
    Despite competition for both space and nutrients, bacterial species often coexist within structured, surface-attached communities termed biofilms. While these communities play important, widespread roles in ecosystems and are agents of human infection, understanding how multiple bacterial species assemble to form these communities and what physical processes underpin the composition of multispecies biofilms remains an active area of research. Using a model three-species community composed of Pseudomonas aeruginosa, Escherichia coli, and Enterococcus faecalis, we show with cellular-scale resolution that biased dispersal of the dominant community member, P. aeruginosa, prevents competitive exclusion from occurring, leading to the coexistence of the three species. A P. aeruginosa bqsS deletion mutant no longer undergoes periodic mass dispersal, leading to the local competitive exclusion of E. coli. Introducing periodic, asymmetric dispersal behavior into minimal models, parameterized by only maximal growth rate and local density, supports the intuition that biased dispersal of an otherwise dominant competitor can permit coexistence generally. Colonization experiments show that WT P. aeruginosa is superior at colonizing new areas, in comparison to ΔbqsS P. aeruginosa, but at the cost of decreased local competitive ability against E. coli and E. faecalis. Overall, our experiments document how one species\' modulation of a competition-dispersal-colonization trade-off can go on to influence the stability of multispecies coexistence in spatially structured ecosystems.
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  • 文章类型: Journal Article
    物种特征和相互作用是进化史的产物。尽管长期以来的假设认为密切相关的物种具有相似的特征,从而经历更激烈的竞争,衡量进化历史对自然群落生态的影响仍然具有挑战性。我们提出了一个新的框架来测试系统发育是否会影响物种组合的共存模式和丰度。在我们的方法中,系统发育树用于参数化物种相互作用,这反过来又决定了给定组合中物种的丰度。我们使用可能性对具有给定系统发育参数的模型进行评分,并将它们与使用随机树构建的模型进行对比,允许我们测试系统发育信息是否有助于预测物种的丰度。我们的统计框架表明,在大量实验植物群落中,相互作用确实是由系统发育构成的。我们的结果证实了进化史可以帮助预测,并有可能管理或保护,复杂生态群落的结构和功能。
    Species\' traits and interactions are products of evolutionary history. Despite the long-standing hypothesis that closely related species possess similar traits, and thus experience stronger competition, measuring the effect of evolutionary history on the ecology of natural communities remains challenging. We propose a novel framework to test whether phylogeny influences patterns of coexistence and abundance of species assemblages. In our approach, phylogenetic trees are used to parameterize species\' interactions, which in turn determine the abundance of species in a given assemblage. We use likelihoods to score models parameterized with a given phylogeny, and contrast them with models built using random trees, allowing us to test whether phylogenetic information helps to predict species\' abundances. Our statistical framework reveals that interactions are indeed structured by phylogeny in a large set of experimental plant communities. Our results confirm that evolutionary history can help predict, and potentially manage or conserve, the structure and function of complex ecological communities.
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  • 文章类型: Journal Article
    生物降解塑料的使用越来越多,可能会导致土壤中与生物炭共存的微塑料污染更加严重。这将影响有机污染物在土壤中的移动和转化。这项工作研究了可生物降解的聚己二酸丁二醇酯-对苯二甲酸酯(PBAT)与在400和700°C(W4和W7)温度下产生的生物炭共存对土壤细菌群落和菲降解的影响。结果表明,与单一添加PBAT或生物炭的土壤相比,PBAT和生物炭颗粒的共存大大提高了诺卡氏菌的相对丰度,同时降低了鞘氨醇单胞菌的相对丰度。土壤Eh值的变化是细菌群落中影响最大的因素(贡献超过40%)。PBAT与W7共存时菲的降解率(39.6±3.6%)与单一W7添加处理(35.0±2.3%,P>0.05),并与土壤中W7吸附态的菲降解有关。相比之下,与W4共存的PBAT中菲的降解率(35.1±3.5%)介于单一PBAT(49.8±0.9%)和W4(13.7±5.8%)之间。这主要是由于实验的初始生物可利用的菲含量的变化。此外,引入蚯蚓后,共存处理中菲的降解率与上述没有蚯蚓的情况下非常相似。除了含有W7的两种处理外,其他处理中菲的降解率由于蚯蚓的存在而增加(高达23%),这与多环芳烃降解剂的相对丰度增加有关。我们的发现表明,PBAT与高温或低温生物炭共存对土壤中细菌群落和菲降解的影响完全不同。
    The increasing use of biodegradable plastics may result in more serious pollution of microplastics which often coexist with biochar in soil, this will affect how organic pollutants move and transform in the soil. This work investigated the effect of biodegradable polybutylene adipate-co-terephthalate (PBAT) coexistence with biochars produced at temperatures of 400 and 700 °C (W4 and W7) on soil bacterial communities and phenanthrene degradation. The results showed that coexistence of PBAT and biochar paticles greatly boosted the relative abundance of Nocardioides while decreased the relative abundance of Sphingomonas as compared to soils with a single addition of PBAT or biochar. Changes in soil Eh values were the most influential factor in bacterial communities (more than 40% contribution). The degradation ratio of phenanthrene when PBAT coexisted with W7 (39.6 ± 3.6%) was not significantly different from the treatment with a single W7 addition (35.0 ± 2.3%, P>0.05), and was related to phenanthrene degradation in the adsorbed state of W7 in soil. In contrast, the degradation ratio of phenanthrene in PBAT coexisting with W4 (35.1 ± 3.5%) was intermediate between that of single PBAT (49.8 ± 0.9%) and W4 (13.7 ± 5.8%) treatments. This was primarily due to changes in the experiment\'s initial bioavailable phenanthrene content. Furthermore, after the introduction of earthworms, phenanthrene degradation ratio in coexistence treatments were very similar to that described above in the absence of earthworms. Except for two treatments that contain W7, phenanthrene degradation ratio in the other treatments was increased by the presence of earthworms (up to 23%), which is related to the enhanced relative abundance of polycyclic aromatic hydrocarbon-degraders. Our findings indicated that PBAT coexistence with high-temperature or low-temperature biochar had a completely different impact on bacterial communities and phenanthrene degradation in soil.
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  • 文章类型: Journal Article
    系统性红斑狼疮(SLE)和银屑病(Ps)是两种发病机制不同的临床疾病。然而,最近的研究表明,在临床表现和发病机制方面有一些相似之处。这两个实体的共存非常罕见,并且尚未得到充分阐明。因此,它仍然是诊断和治疗的挑战。事实上,用于SLE的药物可以诱发银屑病病变,而对Ps有效的光疗是引起SLE患者皮肤病变的重要因素。这项工作的目的是详细讨论常见的致病因素和对两种疾病有效的治疗选择。
    Systemic lupus erythematosus (SLE) and psoriasis (Ps) are two clinically distinct diseases with different pathogenesis. However, recent studies indicate some similarities in both clinical presentation and pathogenetic mechanisms. The coexistence of both entities is very uncommon and has not been fully elucidated. Thus, it remains a diagnostic and therapeutic challenge. In fact, drugs used in SLE can induce psoriatic lesions, whereas phototherapy effective in Ps is an important factor provoking skin lesions in patients with SLE. The aim of this work is to discuss in detail the common pathogenetic elements and the therapeutic options effective in both diseases.
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  • 文章类型: Journal Article
    生物繁殖最终取决于化学自催化。自催化化学循环被认为在生命过程中的化学络合中起着重要作用。有两个,相关问题:什么化学转化允许这样的循环形成,以及它们的运行速度。在这里,我们研究了资源无限批次和资源有限恒化器系统中单独和竞争性自动催化循环的后一个问题。生长速度随着周期的长度而趋于降低。生殖步骤的可逆性导致有利于竞争共存的抛物线生长。资源吸收的可逆性也减缓了增长。通过竞争对手的循环进行单方面帮助倾向于竞争对手(实际上是助手上的寄生虫),呈现共存的可能性不大。我们还表明,深度学习能够仅从拓扑结构和动力学速率常数来预测竞争的结果,前提是训练集足够大。这些研究为研究具有更复杂耦合的自催化循环铺平了道路,如相互催化。
    Biological reproduction rests ultimately on chemical autocatalysis. Autocatalytic chemical cycles are thought to have played an important role in the chemical complexification en route to life. There are two, related issues: what chemical transformations allow such cycles to form, and at what speed they are operating. Here we investigate the latter question for solitary as well as competitive autocatalytic cycles in resource-unlimited batch and resource-limited chemostat systems. The speed of growth tends to decrease with the length of a cycle. Reversibility of the reproductive step results in parabolic growth that is conducive to competitive coexistence. Reversibility of resource uptake also slows down growth. Unilateral help by a cycle of its competitor tends to favour the competitor (in effect a parasite on the helper), rendering coexistence unlikely. We also show that deep learning is able to predict the outcome of competition just from the topology and the kinetic rate constants, provided the training set is large enough. These investigations pave the way for studying autocatalytic cycles with more complicated coupling, such as mutual catalysis.
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  • 文章类型: Journal Article
    蝙蝠携带可以感染其他哺乳动物的高毒力病毒,包括人类,对他们的免疫耐受机制提出质疑。蝙蝠细胞采用多种策略来限制病毒复制和病毒诱导的免疫病理学,但是蝙蝠和致命病毒的共存仍然知之甚少。这里,我们研究了蝙蝠细胞中的抗病毒RNA干扰途径,发现它们具有增强的抗病毒RNAi应答,在人类细胞中缺失的辛德毕斯病毒感染后产生典型的病毒小干扰RNA。Dicer功能的破坏导致蝙蝠细胞中三种不同RNA病毒的病毒载量增加,表明干扰素非依赖性抗病毒途径。此外,我们的发现揭示了Dicer和模式识别受体的同时参与,如维甲酸诱导基因I,双链RNA,这表明Dicer减弱了蝙蝠细胞的干扰素反应。这些见解促进了我们对蝙蝠与病毒共存的独特策略的理解。
    Bats harbor highly virulent viruses that can infect other mammals, including humans, posing questions about their immune tolerance mechanisms. Bat cells employ multiple strategies to limit virus replication and virus-induced immunopathology, but the coexistence of bats and fatal viruses remains poorly understood. Here, we investigate the antiviral RNA interference pathway in bat cells and discover that they have an enhanced antiviral RNAi response, producing canonical viral small interfering RNAs upon Sindbis virus infection that are missing in human cells. Disruption of Dicer function results in increased viral load for three different RNA viruses in bat cells, indicating an interferon-independent antiviral pathway. Furthermore, our findings reveal the simultaneous engagement of Dicer and pattern-recognition receptors, such as retinoic acid-inducible gene I, with double-stranded RNA, suggesting that Dicer attenuates the interferon response initiation in bat cells. These insights advance our comprehension of the distinctive strategies bats employ to coexist with viruses.
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  • 文章类型: Journal Article
    微生物的空气传播是一种普遍存在的迁移机制,允许其他独立的微生物栖息地通过生物质交换相互作用。这里,我们使用细菌-噬菌体相互作用的简单空间模型研究这种对流运输的生态意义:每个栖息地的种群动态由经典的Lotka-Volterra方程描述;然而,物种种群被视为整数,也就是说,一个离散的,存在正的灭绝阈值。空间上,物种可以通过随机空气传播从栖息地传播到栖息地。在任何给定的栖息地,空间生物量交换导致种群密度不断振荡,which,因此,偶尔会导致物种灭绝。局部灭绝事件和扩散引起的迁移之间的平衡使物种能够在全球范围内持续存在,即使竞争排斥会耗尽多样性,本地。因此,生物质分散的破坏性作用增加了微生物多样性,允许系统规模的多种物种共存,这些物种不会在本地共存。
    Airborne dispersal of microorganisms is a ubiquitous migration mechanism, allowing otherwise independent microbial habitats to interact via biomass exchange. Here, we study the ecological implications of such advective transport using a simple spatial model for bacteria-phage interactions: the population dynamics at each habitat are described by classical Lotka-Volterra equations; however, species populations are taken as integer, that is, a discrete, positive extinction threshold exists. Spatially, species can spread from habitat to habitat by stochastic airborne dispersal. In any given habitat, the spatial biomass exchange causes incessant population density oscillations, which, as a consequence, occasionally drive species to extinction. The balance between local extinction events and dispersal-induced migration allows species to persist globally, even though diversity would be depleted by competitive exclusion, locally. The disruptive effect of biomass dispersal thus acts to increase microbial diversity, allowing system-scale coexistence of multiple species that would not coexist locally.
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