clonal hematopoiesis

克隆造血
  • 文章类型: Journal Article
    不确定潜力(CHIP)的克隆造血与多种衰老相关疾病有关,包括血液系统恶性肿瘤和动脉粥样硬化性心血管疾病(ASCVD)。虽然CHIP在老年人中很常见,推动其发展的潜在因素在很大程度上是未知的。为了解决这个问题,我们对社区动脉粥样硬化风险研究(ARIC)参与者收集的8,374份血液DNA样本进行了全外显子组测序,中位随访时间为21年.在此期间,735名参与者开发了事件芯片。剪接因子基因(SF3B1,SRSF2,U2AF1和ZRSR2)和TET2CHIP的生长速度明显快于DNMT3A非R882克隆。我们发现基线年龄和性别显著影响CHIP的发病率,而ASCVD和其他传统ASCVD危险因素不表现出这种关联。此外,基线同义乘客突变与CHIP状态密切相关,并且可以预测新的CHIP克隆获得和长期随访中的克隆生长。为老化的造血干细胞和祖细胞的克隆动力学提供有价值的见解。这项研究还揭示了种系遗传变异与事件CHIP之间的关联。我们全面的纵向评估可深入了解导致老年人CHIP克隆发育和发展的细胞内在和外在因素。
    Clonal hematopoiesis of indeterminate potential (CHIP) is linked to diverse aging-related diseases, including hematologic malignancy and atherosclerotic cardiovascular disease (ASCVD). While CHIP is common among older adults, the underlying factors driving its development are largely unknown. To address this, we performed whole-exome sequencing on 8,374 blood DNA samples collected from 4,187 Atherosclerosis Risk in Communities Study (ARIC) participants over a median follow-up of 21 years. During this period, 735 participants developed incident CHIP. Splicing factor genes (SF3B1, SRSF2, U2AF1, and ZRSR2) and TET2 CHIP grow significantly faster than DNMT3A non-R882 clones. We find that age at baseline and sex significantly influence the incidence of CHIP, while ASCVD and other traditional ASCVD risk factors do not exhibit such associations. Additionally, baseline synonymous passenger mutations are strongly associated with CHIP status and are predictive of new CHIP clone acquisition and clonal growth over extended follow-up, providing valuable insights into clonal dynamics of aging hematopoietic stem and progenitor cells. This study also reveals associations between germline genetic variants and incident CHIP. Our comprehensive longitudinal assessment yields insights into cell-intrinsic and -extrinsic factors contributing to the development and progression of CHIP clones in older adults.
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  • 文章类型: Journal Article
    造血干细胞(HSC)生物学的主要下一步是增强我们对未受干扰的造血功能所涉及的细胞和进化动力学的定量理解。在这方面,数学模型一直是并将继续是关键,并且在实验参数化并包含足够的生物学复杂性时最强大。在本文中,我们使用来自小鼠标记繁殖实验的数据来参数化造血的数学模型,包括稳态控制机制以及克隆进化。我们发现非线性反馈控制可以极大地改变稳态时动力学估计的解释。这表明短期HSC和多能祖细胞可以动态调整以在没有长期HSC的情况下暂时维持自身。即使它们在不受干扰的体内平衡中分化比自我更新更频繁。此外,模型中反馈控制的存在使系统具有抵抗突变入侵的弹性。入侵障碍,然而,可以通过结合年龄相关的干细胞分化变化和基于突变相关的炎症环境的进化生态位构建动力学来克服。这有助于我们理解例如,TET2或DNMT3A突变体,以及如何潜在地减少突变负担。
    A major next step in hematopoietic stem cell (HSC) biology is to enhance our quantitative understanding of cellular and evolutionary dynamics involved in undisturbed hematopoiesis. Mathematical models have been and continue to be key in this respect, and are most powerful when parameterized experimentally and containing sufficient biological complexity. In this paper, we use data from label propagation experiments in mice to parameterize a mathematical model of hematopoiesis that includes homeostatic control mechanisms as well as clonal evolution. We find that nonlinear feedback control can drastically change the interpretation of kinetic estimates at homeostasis. This suggests that short-term HSC and multipotent progenitors can dynamically adjust to sustain themselves temporarily in the absence of long-term HSCs, even if they differentiate more often than they self-renew in undisturbed homeostasis. Additionally, the presence of feedback control in the model renders the system resilient against mutant invasion. Invasion barriers, however, can be overcome by a combination of age-related changes in stem cell differentiation and evolutionary niche construction dynamics based on a mutant-associated inflammatory environment. This helps us understand the evolution of e.g., TET2 or DNMT3A mutants, and how to potentially reduce mutant burden.
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  • 文章类型: Journal Article
    高血压发病率随年龄增长而增加,是心血管疾病最普遍的危险因素之一。由驱动基因的体细胞突变引起的造血系统中的克隆事件在缺乏明显血液系统疾病的老年人中很普遍。这种情况被称为年龄相关的克隆造血(CH),它是新认识的心血管疾病的危险因素。目前尚不清楚老年人的CH和高血压是否有因果关系,如果是,有什么机械特征。
    采用过继性骨髓移植的小鼠模型来检查Tet2(十11易位甲基胞嘧啶双加氧酶2)CH与高血压之间的相互作用。在这个模型中,AngII(血管紧张素II)的降压剂量最早在激发后1天导致收缩压和舒张压升高.这些条件导致Tet2缺陷的促炎单核细胞和骨髓祖细胞群的扩增。Tet2缺乏促进肾脏CCL5趋化因子表达和巨噬细胞浸润到肾脏。与巨噬细胞参与一致,当用抑制剂剂量的AngII治疗小鼠时,骨髓细胞中的Tet2缺乏会促进高血压。造血Tet2-/-条件导致钠潴留,肾炎性体激活,IL(白细胞介素)-1β和IL-18水平升高。钠转运蛋白的分析表明NCC(Na+-Cl-协同转运蛋白)和NKCC2分别在残基Thr53和Ser105处活化。NLRP3炎性体抑制剂MCC950的给药逆转了高血压状态,钠潴留,和肾转运蛋白激活。
    Tet2介导的CH使小鼠对高血压刺激敏感。机械上,由于肾免疫细胞浸润和NLRP3炎性体的激活,造血Tet2缺陷细胞的扩增促进高血压,对钠潴留的影响。这些数据表明TET2CH的携带者可能处于高血压发展的高风险中,并且免疫调节剂可用于治疗该患者人群的高血压。
    UNASSIGNED: Hypertension incidence increases with age and represents one of the most prevalent risk factors for cardiovascular disease. Clonal events in the hematopoietic system resulting from somatic mutations in driver genes are prevalent in elderly individuals who lack overt hematologic disorders. This condition is referred to as age-related clonal hematopoiesis (CH), and it is a newly recognized risk factor for cardiovascular disease. It is not known whether CH and hypertension in the elderly are causally related and, if so, what are the mechanistic features.
    UNASSIGNED: A murine model of adoptive bone marrow transplantation was employed to examine the interplay between Tet2 (ten-eleven translocation methylcytosine dioxygenase 2) CH and hypertension. In this model, a subpressor dose of Ang II (angiotensin II) resulted in elevated systolic and diastolic blood pressure as early as 1 day after the challenge. These conditions led to the expansion of Tet2-deficient proinflammatory monocytes and bone marrow progenitor populations. Tet2-deficiency promoted renal CCL5 chemokine expression and macrophage infiltration into the kidney. Consistent with macrophage involvement, Tet2-deficiency in myeloid cells promoted hypertension when mice were treated with a subpressor dose of Ang II. The hematopoietic Tet2-/- condition led to sodium retention, renal inflammasome activation, and elevated levels of IL (interleukin)-1β and IL-18. Analysis of the sodium transporters indicated NCC (Na+-Cl- cotransporter) and NKCC2 activation at residues Thr53 and Ser105, respectively. Administration of the NLRP3 inflammasome inhibitor MCC950 reversed the hypertensive state, sodium retention, and renal transporter activation.
    UNASSIGNED: Tet2-mediated CH sensitizes mice to a hypertensive stimulus. Mechanistically, the expansion of hematopoietic Tet2-deficient cells promotes hypertension due to elevated renal immune cell infiltration and activation of the NLRP3 inflammasome, with consequences on sodium retention. These data indicate that carriers of TET2 CH could be at elevated risk for the development of hypertension and that immune modulators could be useful in treating hypertension in this patient population.
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  • 文章类型: Letter
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  • 文章类型: Journal Article
    关于能够驱动造血干细胞中与年龄相关的克隆性扩增的突变集合没有普遍共识,称为克隆造血。当前的变体分类通常依赖于从专家知识中得出的规则。在本期癌症发现中,Damajo及其同事在没有克隆造血驱动突变的先验知识的情况下训练和验证了机器学习模型,以纯数据驱动的方式对血液中的12个基因的体细胞突变进行分类。参见Demajo等人的相关文章。,第1717(9)页。
    There is no general consensus on the set of mutations capable of driving the age-related clonal expansions in hematopoietic stem cells known as clonal hematopoiesis, and current variant classifications typically rely on rules derived from expert knowledge. In this issue of Cancer Discovery, Damajo and colleagues trained and validated machine learning models without prior knowledge of clonal hematopoiesis driver mutations to classify somatic mutations in blood for 12 genes in a purely data-driven way. See related article by Demajo et al., p. 1717 (9).
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  • 文章类型: Journal Article
    影像学的最新进展表明,造血细胞在其骨髓微环境(生态位)中的空间组织调节细胞扩增,治理进步,和血液克隆疾病的白血病转化。然而,我们在癌前条件下询问利基的能力是有限的,因为这些疾病的标准小鼠模型很大程度上依赖于将突变克隆移植到骨髓微环境受损的条件小鼠中。这里,我们利用活体动物显微镜和超低剂量全身或局灶性照射来捕获单细胞,并在功能保留的微环境中早期扩增良性/癌前克隆。与非条件对照相比,0.5Gy全身照射(WBI)允许细胞稳定植入超过30周。微环境的体内跟踪和功能分析显示血管完整性没有变化,细胞活力,和基质细胞的HSC支持功能,表明放射性损伤后炎症轻微.该方法实现了Tet2+/-及其健康对应物的体内成像,显示在共享微环境中的优先定位,同时形成离散的微生态位。值得注意的是,与生态位的固定关联仅发生在细胞亚群中,如果没有实时成像,则无法识别。该策略可广泛应用于在空间背景下研究克隆疾病。
    Recent advances in imaging suggested that spatial organization of hematopoietic cells in their bone marrow microenvironment (niche) regulates cell expansion, governing progression, and leukemic transformation of hematological clonal disorders. However, our ability to interrogate the niche in pre-malignant conditions has been limited, as standard murine models of these diseases rely largely on transplantation of the mutant clones into conditioned mice where the marrow microenvironment is compromised. Here, we leveraged live-animal microscopy and ultralow dose whole body or focal irradiation to capture single cells and early expansion of benign/pre-malignant clones in the functionally preserved microenvironment. 0.5 Gy whole body irradiation (WBI) allowed steady engraftment of cells beyond 30 weeks compared to non-conditioned controls. In-vivo tracking and functional analyses of the microenvironment showed no change in vessel integrity, cell viability, and HSC-supportive functions of the stromal cells, suggesting minimal inflammation after the radiation insult. The approach enabled in vivo imaging of Tet2+/- and its healthy counterpart, showing preferential localization within a shared microenvironment while forming discrete micro-niches. Notably, stationary association with the niche only occurred in a subset of cells and would not be identified without live imaging. This strategy may be broadly applied to study clonal disorders in a spatial context.
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  • 文章类型: Clinical Study
    背景:心脏手术会触发无菌的先天免疫反应,导致术后并发症。克隆造血(CH)与心脏手术后短期炎症介导的结果有关。CH对长期术后结局的影响尚不清楚。
    结果:在这项队列研究中,纳入了2017年1月至2019年9月接受择期心脏手术的患者.使用19个基因的预定基因组筛选患者的CH。记录的临床事件为全因死亡,主要心脏和大脑不良事件,包括心血管死亡,心肌梗死或非计划冠状动脉血运重建,中风,和急性心力衰竭住院治疗。主要研究结果是达到复合标准的时间,包括全因死亡率和主要不良心脑事件。在314名基因分型患者中(中位年龄:67岁;四分位距59-74岁),139(44%)提供CH,基于变异等位基因频率≥1%。CH携带者有房颤病史的患者比例较高(CH为26%,非CH携带者为17%,P=0.022)。最常见的突变基因是DNMT3A,TET2和ASXL1。经过1203[813-1435]天的中位随访,主要结局发生在50例患者中.经过多变量调整后,CH与主要结局的较高风险独立相关(风险比,1.88[95%CI,1.05-3.41],P=0.035)。大多数不良事件发生在携带TET2变体的患者中。
    结论:在接受心脏手术的患者中,CH是常见的,并且与主要不良临床结局的长期风险增加2倍相关。CH是长期心脏手术后并发症的新风险因素,可能有助于个性化管理决策。
    背景:URL:https://www。clinicaltrials.gov;唯一标识符:NCT03376165。
    BACKGROUND: Cardiac surgery triggers sterile innate immune responses leading to postoperative complications. Clonal hematopoiesis (CH) is associated with short-term inflammation-mediated outcomes after cardiac surgery. The impact of CH on long-term postoperative outcomes remains unknown.
    RESULTS: In this cohort study, patients undergoing elective cardiac surgery were included from January 2017 to September 2019. Patients were screened for CH using a predefined gene panel of 19 genes. Recorded clinical events were all-cause death, major adverse cardiac and cerebral events including cardiovascular death, myocardial infarction or nonscheduled coronary revascularization, stroke, and hospitalization for acute heart failure. The primary study outcome was time to a composite criterion including all-cause mortality and major adverse cardiac and cerebral events. Among 314 genotyped patients (median age: 67 years; interquartile range 59-74 years), 139 (44%) presented with CH, based on a variant allelic frequency ≥1%. Carriers of CH had a higher proportion of patients with a history of atrial fibrillation (26% for CH versus 17% for non-CH carriers, P=0.022). The most frequently mutated genes were DNMT3A, TET2, and ASXL1. After a median follow-up of 1203 [813-1435] days, the primary outcome occurred in 50 patients. After multivariable adjustment, CH was independently associated with a higher risk for the primary outcome (hazard ratio, 1.88 [95% CI, 1.05-3.41], P=0.035). Most adverse events occurred in patients carrying TET2 variants.
    CONCLUSIONS: In patients undergoing cardiac surgery, CH is frequent and associated with a 2-fold increased long-term risk for major adverse clinical outcomes. CH is a novel risk factor for long-term postcardiac surgery complications and might be useful to personalize management decisions.
    BACKGROUND: URL: https://www.clinicaltrials.gov; Unique identifier: NCT03376165.
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  • 文章类型: News
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  • 文章类型: Journal Article
    不确定潜能(CHIP)的克隆造血作用是通过在没有明显血液恶性肿瘤的情况下白细胞中存在与癌症相关的体细胞突变来定义的。它最常见于表观遗传调节因子DNMT3A和TET2中的功能缺失突变。CHIP易患人类血液系统恶性肿瘤和动脉粥样硬化性心血管疾病。在这里,我们证明了骨髓细胞中Dnmt3a的丢失会增加鼠动脉粥样硬化,其程度与之前Tet2的丢失相似。Dnmt3a的缺失在体外增强了巨噬细胞中的炎症,并在体内产生了不同的外膜巨噬细胞群,其将常驻巨噬细胞谱与炎性细胞因子签名合并。这些变化令人惊讶地表现出Tet2丢失的影响。我们的结果确定了一个共同的途径,促进先天免疫细胞激活增强,其中任何一个基因的丢失,为这两种最普遍的CHIP突变的携带者中过量的动脉粥样硬化疾病负担提供生物学基础。
    Clonal hematopoiesis of indeterminate potential (CHIP) is defined by the presence of a cancer-associated somatic mutation in white blood cells in the absence of overt hematological malignancy. It arises most commonly from loss-of-function mutations in the epigenetic regulators DNMT3A and TET2. CHIP predisposes to both hematological malignancies and atherosclerotic cardiovascular disease in humans. Here we demonstrate that loss of Dnmt3a in myeloid cells increased murine atherosclerosis to a similar degree as previously seen with loss of Tet2. Loss of Dnmt3a enhanced inflammation in macrophages in vitro and generated a distinct adventitial macrophage population in vivo which merges a resident macrophage profile with an inflammatory cytokine signature. These changes surprisingly phenocopy the effect of loss of Tet2. Our results identify a common pathway promoting heightened innate immune cell activation with loss of either gene, providing a biological basis for the excess atherosclerotic disease burden in carriers of these two most prevalent CHIP mutations.
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  • 文章类型: Journal Article
    不确定潜能(CHIP)的克隆造血是由造血干细胞中的体细胞突变引起的,并且与心力衰竭患者的预后较差有关。携带CHIP突变的患者显示炎症增强。然而,目前尚不清楚这些特征是否来自相对较少数量的携带突变的细胞,或者是与CHIP相关的全身性促炎激活的指标.在这里,我们评估CHIP突变细胞在心力衰竭患者中的细胞内在作用。使用改进的单细胞测序流水线(MutDetect-Seq),我们显示DNMT3A突变单核细胞,CD4+T细胞和NK细胞表现出改变的基因表达谱。虽然单核细胞显示与炎症和吞噬作用相关的基因增加,T细胞和NK细胞呈现增加的活化特征和效应子功能。在突变和野生型单核细胞和T细胞之间预测和验证了增加的旁分泌信号通路。放大炎症回路。总之,这些数据为CHIP如何促进心力衰竭患者预后恶化提供了新的见解.
    Clonal hematopoiesis of indeterminate potential (CHIP) is caused by somatic mutations in hematopoietic stem cells and associates with worse prognosis in patients with heart failure. Patients harboring CHIP mutations show enhanced inflammation. However, whether these signatures are derived from the relatively low number of cells harboring mutations or are indicators of systemic pro-inflammatory activation that is associated with CHIP is unclear. Here we assess the cell-intrinsic effects of CHIP mutant cells in patients with heart failure. Using an improved single-cell sequencing pipeline (MutDetect-Seq), we show that DNMT3A mutant monocytes, CD4+ T cells and NK cells exhibit altered gene expression profiles. While monocytes showed increased genes associated with inflammation and phagocytosis, T cells and NK cells present increased activation signatures and effector functions. Increased paracrine signaling pathways are predicted and validated between mutant and wild-type monocytes and T cells, which amplify inflammatory circuits. Altogether, these data provide novel insights into how CHIP might promote a worse prognosis in patients with heart failure.
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