clinical information

临床信息
  • 文章类型: Journal Article
    教医学生获得所需的技能,解释,apply,沟通临床信息是医学教育不可或缺的一部分。此过程的一个关键方面涉及为学生提供有关其自由文本临床笔记质量的反馈。
    本研究的目标是评估大型语言模型ChatGPT3.5的能力,对医学生的自由文本历史和身体笔记进行评分。
    这是一个单一的机构,回顾性研究。标准化的患者学到了预先指定的临床病例,作为病人,与医学生互动。每个学生都写了自由文本历史和他们互动的物理笔记。学生的笔记由标准化患者和ChatGPT使用由85个案例元素组成的预先指定的评分规则进行独立评分。准确度的度量是正确的百分比。
    研究人群由168名一年级医学生组成。总共有14,280分。ChatGPT错误得分率为1.0%,标准化患者错误评分率为7.2%。ChatGPT错误率为86%,低于标准化患者错误率。ChatGPT平均不正确得分为12(SD11)显着低于标准化患者平均不正确得分为85(SD74;P=0.002)。
    与标准化患者相比,ChatGPT显示出较低的错误率。这是第一项评估生成预训练变压器(GPT)计划对医学生的标准化基于患者的免费文本临床笔记进行评分的能力的研究。预计,在不久的将来,大型语言模型将为执业医师提供有关其自由文本注释的实时反馈。GPT人工智能程序代表了医学教育和医学实践的重要进步。
    UNASSIGNED: Teaching medical students the skills required to acquire, interpret, apply, and communicate clinical information is an integral part of medical education. A crucial aspect of this process involves providing students with feedback regarding the quality of their free-text clinical notes.
    UNASSIGNED: The goal of this study was to assess the ability of ChatGPT 3.5, a large language model, to score medical students\' free-text history and physical notes.
    UNASSIGNED: This is a single-institution, retrospective study. Standardized patients learned a prespecified clinical case and, acting as the patient, interacted with medical students. Each student wrote a free-text history and physical note of their interaction. The students\' notes were scored independently by the standardized patients and ChatGPT using a prespecified scoring rubric that consisted of 85 case elements. The measure of accuracy was percent correct.
    UNASSIGNED: The study population consisted of 168 first-year medical students. There was a total of 14,280 scores. The ChatGPT incorrect scoring rate was 1.0%, and the standardized patient incorrect scoring rate was 7.2%. The ChatGPT error rate was 86%, lower than the standardized patient error rate. The ChatGPT mean incorrect scoring rate of 12 (SD 11) was significantly lower than the standardized patient mean incorrect scoring rate of 85 (SD 74; P=.002).
    UNASSIGNED: ChatGPT demonstrated a significantly lower error rate compared to standardized patients. This is the first study to assess the ability of a generative pretrained transformer (GPT) program to score medical students\' standardized patient-based free-text clinical notes. It is expected that, in the near future, large language models will provide real-time feedback to practicing physicians regarding their free-text notes. GPT artificial intelligence programs represent an important advance in medical education and medical practice.
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  • 文章类型: Journal Article
    脑出血(ICH)是一种以高发率为特征的危重症,相当高的死亡率,和不可预测的临床结果,对人类健康造成严重威胁。改善预后评估的及时性和准确性对于最大程度地减少与ICH相关的死亡率和长期残疾至关重要。由于ICH的复杂性,ICH在临床实践中的诊断在很大程度上依赖于医生的专业知识和临床经验.传统的预后方法在很大程度上取决于医疗保健专业人员的专业知识和主观判断。同时,现有的人工智能(AI)方法,主要利用计算机断层扫描(CT)扫描的特征,未能捕捉到ICH的多面性。尽管现有方法能够整合临床信息和CT图像以进行预后,这种融合过程的有效性仍然需要改进。为了克服这些限制,本研究引入了一种新的人工智能框架,称为ICH网络(ICH-Net),它采用联合注意力交叉模式网络来协同临床文本数据与CT成像特征。ICH-Net的体系结构由三个组成部分组成:特征提取模块,从临床和影像学数据中处理和提取显著特征,功能融合模块,融合了不同的数据流,和分类模块,它解释融合的特征以提供预后预测。我们的评价,通过严格的五次交叉验证过程进行,证明ICH-Net达到了高达87.77%的令人称道的准确度,优于我们研究中详述的其他最先进的方法。这一证据强调了ICH-Net作为预测ICH的强大工具的潜力,有望在临床决策和患者护理方面取得重大进展。
    Intracerebral hemorrhage (ICH) is a critical condition characterized by a high prevalence, substantial mortality rates, and unpredictable clinical outcomes, which results in a serious threat to human health. Improving the timeliness and accuracy of prognosis assessment is crucial to minimizing mortality and long-term disability associated with ICH. Due to the complexity of ICH, the diagnosis of ICH in clinical practice heavily relies on the professional expertise and clinical experience of physicians. Traditional prognostic methods largely depend on the specialized knowledge and subjective judgment of healthcare professionals. Meanwhile, existing artificial intelligence (AI) methodologies, which predominantly utilize features derived from computed tomography (CT) scans, fall short of capturing the multifaceted nature of ICH. Although existing methods are capable of integrating clinical information and CT images for prognosis, the effectiveness of this fusion process still requires improvement. To surmount these limitations, the present study introduces a novel AI framework, termed the ICH Network (ICH-Net), which employs a joint-attention cross-modal network to synergize clinical textual data with CT imaging features. The architecture of ICH-Net consists of three integral components: the Feature Extraction Module, which processes and abstracts salient characteristics from the clinical and imaging data, the Feature Fusion Module, which amalgamates the diverse data streams, and the Classification Module, which interprets the fused features to deliver prognostic predictions. Our evaluation, conducted through a rigorous five-fold cross-validation process, demonstrates that ICH-Net achieves a commendable accuracy of up to 87.77%, outperforming other state-of-the-art methods detailed within our research. This evidence underscores the potential of ICH-Net as a formidable tool in prognosticating ICH, promising a significant advancement in clinical decision-making and patient care.
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  • 文章类型: Journal Article
    背景:大型语言模型(LLM)在自然语言处理(NLP)中显示出非凡的能力,特别是在标记数据稀缺或昂贵的领域,例如临床领域。然而,为了解开隐藏在这些LLM中的临床知识,我们需要设计有效的提示,引导他们在没有任何任务特定训练数据的情况下执行特定的临床NLP任务.这被称为上下文学习,这是一门艺术和科学,需要了解不同LLM的优势和劣势,并迅速采用工程方法。
    目的:本研究的目的是评估各种即时工程技术的有效性,包括2个新引入的类型-启发式和合奏提示,使用预训练的语言模型进行零射和少射临床信息提取。
    方法:这项全面的实验研究评估了不同的提示类型(简单的前缀,简单的完形填空,思想链,预期,启发式,和合奏)跨越5个临床NLP任务:临床意义消歧,生物医学证据提取,共同参照决议,药物状态提取,和药物属性提取。使用3种最先进的语言模型评估了这些提示的性能:GPT-3.5(OpenAI),双子座(谷歌),和LLaMA-2(Meta)。该研究将零射与少射提示进行了对比,并探讨了合奏方法的有效性。
    结果:研究表明,针对特定任务的提示定制对于LLM在零射临床NLP中的高性能至关重要。在临床意义上的消歧,GPT-3.5在启发式提示下达到0.96的准确性,在生物医学证据提取中达到0.94的准确性。启发式提示,伴随着一连串的思想提示,跨任务非常有效。在复杂的场景中,很少有机会提示提高性能,和集合方法利用了多种即时优势。GPT-3.5在任务和提示类型上的表现始终优于Gemini和LLaMA-2。
    结论:本研究对即时工程方法进行了严格的评估,并介绍了临床信息提取的创新技术,证明了临床领域上下文学习的潜力。这些发现为未来基于提示的临床NLP研究提供了明确的指导方针。促进非NLP专家参与临床NLP进步。据我们所知,这是在这个生成人工智能时代,对临床NLP的不同提示工程方法进行实证评估的首批作品之一,我们希望它能激励和指导未来在这一领域的研究。
    BACKGROUND: Large language models (LLMs) have shown remarkable capabilities in natural language processing (NLP), especially in domains where labeled data are scarce or expensive, such as the clinical domain. However, to unlock the clinical knowledge hidden in these LLMs, we need to design effective prompts that can guide them to perform specific clinical NLP tasks without any task-specific training data. This is known as in-context learning, which is an art and science that requires understanding the strengths and weaknesses of different LLMs and prompt engineering approaches.
    OBJECTIVE: The objective of this study is to assess the effectiveness of various prompt engineering techniques, including 2 newly introduced types-heuristic and ensemble prompts, for zero-shot and few-shot clinical information extraction using pretrained language models.
    METHODS: This comprehensive experimental study evaluated different prompt types (simple prefix, simple cloze, chain of thought, anticipatory, heuristic, and ensemble) across 5 clinical NLP tasks: clinical sense disambiguation, biomedical evidence extraction, coreference resolution, medication status extraction, and medication attribute extraction. The performance of these prompts was assessed using 3 state-of-the-art language models: GPT-3.5 (OpenAI), Gemini (Google), and LLaMA-2 (Meta). The study contrasted zero-shot with few-shot prompting and explored the effectiveness of ensemble approaches.
    RESULTS: The study revealed that task-specific prompt tailoring is vital for the high performance of LLMs for zero-shot clinical NLP. In clinical sense disambiguation, GPT-3.5 achieved an accuracy of 0.96 with heuristic prompts and 0.94 in biomedical evidence extraction. Heuristic prompts, alongside chain of thought prompts, were highly effective across tasks. Few-shot prompting improved performance in complex scenarios, and ensemble approaches capitalized on multiple prompt strengths. GPT-3.5 consistently outperformed Gemini and LLaMA-2 across tasks and prompt types.
    CONCLUSIONS: This study provides a rigorous evaluation of prompt engineering methodologies and introduces innovative techniques for clinical information extraction, demonstrating the potential of in-context learning in the clinical domain. These findings offer clear guidelines for future prompt-based clinical NLP research, facilitating engagement by non-NLP experts in clinical NLP advancements. To the best of our knowledge, this is one of the first works on the empirical evaluation of different prompt engineering approaches for clinical NLP in this era of generative artificial intelligence, and we hope that it will inspire and inform future research in this area.
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  • 文章类型: Journal Article
    背景:转诊是放射科医生评估模态的基础,协议和紧迫性,信息不足可能威胁患者安全。这项研究的目的是评估下肢静脉双工超声检查(LEVDUS)和计算机断层扫描肺动脉造影(CTPA)转诊的完整性,并调查所提供的临床信息之间的关联,包括风险因素,转诊的症状和实验室结果以及深静脉血栓形成(DVT)和肺栓塞(PE)的阳性结果,分别。
    方法:获得2016年至2019年进行的LEVDUS(801)和CTPA(800)转诊。记录了来自转诊者的三类临床信息:症状,危险因素和实验室结果,以及静脉血栓栓塞(VTE)的阳性影像学发现。根据转诊提供的临床信息的类别,转诊完整性从零到三。
    结果:在LEVDUS和CTPA的转诊中,有15%和25%提供了来自所有三个临床信息类别的信息,分别,而2%和10%的转诊不包含任何临床信息。症状最常见(LEVDUS为85%,CTPA为94%)。提供有关风险因素的信息与LEVDUS的阳性结果显着相关,(p=0.02)和CTPA(p<0.001)。
    结论:绝大多数转诊未能提供一个或多个类别的临床信息。危险因素与LEVDUS和CTPA的VTE阳性相关。
    结论:改善转诊中的临床信息可能会改善合理性,患者安全和放射学服务质量。
    BACKGROUND: The referral is the basis for radiologists\' assessment of modality, protocol and urgency, and insufficient information may threaten patient safety. The aim of this study was to assess the completeness of referrals for lower extremity venous duplex ultrasonography (LEVDUS) and computed tomography pulmonary angiography (CTPA), and to investigate associations between the provided clinical information including risk factors, symptoms and lab results in the referrals and positive findings of deep vein thrombosis (DVT) and pulmonary embolism (PE), respectively.
    METHODS: Referrals for LEVDUS (801) and CTPA (800) performed from 2016 to 2019 were obtained. Three categories of clinical information from the referrals were recorded: symptoms, risk factors and laboratory results, as well as positive imaging findings of venous thromboembolism (VTE). Referral completeness was rated from zero to three according to how many categories of clinical information the referral provided.
    RESULTS: Information from all three clinical information categories was provided in 15% and 25% of referrals for LEVDUS and CTPA, respectively, while 2% and 10% of referrals did not contain any clinical information. Symptoms were provided most often (85% for LEVDUS and 94% for CTPA). Provided information about risk factors was significantly associated with positive findings for LEVDUS, (p = 0.02) and CTPA (p < 0.001).
    CONCLUSIONS: A great majority of referrals failed to provide one or more categories of clinical information. Risk factors were associated with a positive finding of VTE on LEVDUS and CTPA.
    CONCLUSIONS: Improving clinical information in referrals may improve justification, patient safety and quality of radiology services.
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  • 文章类型: Journal Article
    Stevens-Johnson综合征和中毒性表皮坏死松解症(SJS/TEN)是潜在威胁生命的严重皮肤药物不良反应。这些疾病很罕见,由于它们的特殊反应性,它们的发作很难预测。日本严重不良反应研究小组,由国家健康科学研究所领导,自2006年以来,一直在全国范围内收集SJS/TEN患者的临床信息和基因组样本。这项研究评估了日本SJS/TEN患者的临床症状与后遗症和特定致病药物/药物组的关系,以确定SJS/TEN治疗和预后的临床线索。对乙酰氨基酚,抗生素,和carcisteine与严重眼部症状和眼部后遗症的高频率相关(p<0.05)。对于红斑和侵蚀区域,解热镇痛药比其他药物有更高的皮肤症状影响<10%的皮肤,提示病变较窄(p<0.004)。肝功能障碍,在SJS和TEN中都很常见,与其他药物组相比,抗癫痫药物具有更高的肝功能障碍风险(p=0.0032)。这项研究表明,SJS/TEN的临床表现因致病药物而异。
    Stevens-Johnson syndrome and toxic epidermal necrolysis (SJS/TEN) are potentially life-threatening severe cutaneous adverse drug reactions. These diseases are rare, and their onset is difficult to predict because of their idiosyncratic reactivity. The Japan Severe Adverse Reactions Research Group, led by the National Institute of Health Sciences, has operated a nationwide to collect clinical information and genomic samples from patients with SJS/TEN since 2006. This study evaluated the associations of clinical symptoms with sequelae and specific causative drugs/drug groups in Japanese patients with SJS/TEN to identify clinical clues for SJS/TEN treatment and prognosis. Acetaminophen, antibiotics, and carbocisteine were linked to high frequencies of severe ocular symptoms and ocular sequelae (p < 0.05). For erythema and erosion areas, antipyretic analgesics had higher rates of skin symptom affecting <10% of the skin than the other drugs, suggesting narrower lesions (p < 0.004). Hepatic dysfunction, was common in both SJS and TEN, and antiepileptic drugs carried higher risks of hepatic dysfunction than the other drug groups (p = 0.0032). This study revealed that the clinical manifestations of SJS/TEN vary according to the causative drugs.
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  • 文章类型: Journal Article
    背景:雅温得中心医院(YCH),位于喀麦隆首都,是喀麦隆领先的转诊医院之一。医院有几个科室,包括妇产科(以下简称“产妇”)。该临床科室在临床信息化管理方面面临着诸多问题,包括缺乏高质量和可靠的临床信息,无法获得这些信息,以及对这些信息的不良使用。
    目的:我们的目标是改善在YCH产房产生的临床信息的管理,并描述挑战,成功因素,以及在实施和使用过程中吸取的教训。
    方法:基于开源医院信息系统(HIS),该干预措施在YCH的孕产妇处实施了临床信息系统(CIS),并使用HERMES模型进行-第一部分旨在涵盖门诊咨询,billing,和产妇的现金管理。日内瓦大学医院支持这个项目,最后测量了几个结果。评估了以下结果:项目管理,技术和组织方面,领导力,变更管理,用户培训,和系统使用。
    项目的第一部分已经完成,CIS被部署在YCH的孕产妇中。主要技术活动是采用开源的HIS来管理门诊咨询并开发集成的账单和现金管理软件。除了技术方面,我们实施了其他几项活动。它们包括实施适当的项目治理或管理,改善产妇的组织流程,促进当地数字医疗领导力和变革管理绩效,并实施用户的培训和支持。尽管在项目期间遇到了障碍,6个月评估显示,前6个月CIS得到了有效使用.
    结论:在喀麦隆等资源有限的环境中实施HIS或CIS是可行的。TheCIS是根据YCH孕产妇的良好做法实施的。这个项目取得了成功,但也面临许多挑战。除了项目管理和技术和财务方面,在非洲实施卫生信息系统或HIS的其他主要问题在于数字卫生领导,治理,和变更管理。这个数字健康领导,治理,和变革管理应优先考虑数据作为提高生产力和管理卫生机构的工具,并在卫生专业人员中促进数据文化,以支持思维方式的改变和信息管理技能的获取。此外,在像我们这样高度集权政治制度的国家,这类项目往往需要一个高层次的战略和政治支柱,以保证它们的成功。
    BACKGROUND: Yaoundé Central Hospital (YCH), located in the capital of Cameroon, is one of the leading referral hospitals in Cameroon. The hospital has several departments, including the Department of Gynecology-Obstetrics (hereinafter referred to as \"the Maternity\"). This clinical department has faced numerous problems with clinical information management, including the lack of high-quality and reliable clinical information, lack of access to this information, and poor use of this information.
    OBJECTIVE: We aim to improve the management of clinical information generated at the Maternity at YCH and to describe the challenges, success factors, and lessons learned during its implementation and use.
    METHODS: Based on an open-source hospital information system (HIS), this intervention implemented a clinical information system (CIS) at the Maternity at YCH and was carried out using the HERMES model-the first part aimed to cover outpatient consultations, billing, and cash management of the Maternity. Geneva University Hospitals supported this project, and several outcomes were measured at the end. The following outcomes were assessed: project management, technical and organizational aspects, leadership, change management, user training, and system use.
    UNASSIGNED: The first part of the project was completed, and the CIS was deployed in the Maternity at YCH. The main technical activities were adapting the open-source HIS to manage outpatient consultations and develop integrated billing and cash management software. In addition to technical aspects, we implemented several other activities. They consisted of the implementation of appropriate project governance or management, improvement of the organizational processes at the Maternity, promotion of the local digital health leadership and performance of change management, and implementation of the training and support of users. Despite barriers encountered during the project, the 6-month evaluation showed that the CIS was effectively used during the first 6 months.
    CONCLUSIONS: Implementation of the HIS or CIS is feasible in a resource-limited setting such as Cameroon. The CIS was implemented based on good practices at the Maternity at YCH. This project had successes but also many challenges. Beyond project management and technical and financial aspects, the other main problems of implementing health information systems or HISs in Africa lie in digital health leadership, governance, and change management. This digital health leadership, governance, and change management should prioritize data as a tool for improving productivity and managing health institutions, and promote a data culture among health professionals to support a change in mindset and the acquisition of information management skills. Moreover, in countries with a highly centralized political system like ours, a high-level strategic and political anchor for such projects is often necessary to guarantee their success.
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  • 文章类型: Journal Article
    Radiological reporting errors have a direct negative impact on patient treatment. The purpose of this study was to investigate the contribution of clinical information (CI) in radiological reporting of oncological imaging and the dependence on the radiologists’ experience level (EL). Sixty-four patients with several types of carcinomas and twenty patients without tumors were enrolled. Computed tomography datasets acquired in primary or follow-up staging were independently analyzed by three radiologists (R) with different EL (R1: 15 years; R2: 10 years, R3: 1 year). Reading was initially performed without and 3 months later with CI. Overall, diagnostic accuracy and sensitivity for primary tumor detection increased significantly when receiving CI from 77% to 87%; p = 0.01 and 73% to 83%; p = 0.01, respectively. All radiologists benefitted from CI; R1: 85% vs. 92%, p = 0.15; R2: 77% vs. 83%, p = 0.33; R3: 70% vs. 86%, p = 0.02. Overall, diagnostic accuracy and sensitivity for detecting lymphogenous metastases increased from 80% to 85% (p = 0.13) and 42% to 56% (p = 0.13), for detection of hematogenous metastases from 85% to 86% (p = 0.61) and 46% to 60% (p = 0.15). Specificity remained stable (>90%). Thus, CI in oncological imaging seems to be essential for correct radiological reporting, especially for residents, and should be available for the radiologist whenever possible.
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  • 文章类型: Journal Article
    背景:在2011年东日本大地震之后,在日本启动了用于临床信息的备份系统。宫城县的系统称为宫城县医疗和福利信息网络(MMWIN),用作健康信息交换网络,可在选择加入的患者的各种医疗机构之间共享临床信息。专门从事慢性肾衰竭的医院和诊所在血液透析期间需要患者的数据和记录,以促进日常临床活动和灾难准备中的沟通。
    目的:本研究旨在促进不同血液透析机构之间血液透析患者临床数据的共享。
    方法:我们引入了一个文件共享系统,以便在MMWIN上提供血液透析报告。我们还招募了医院和诊所,以分享患者的血液透析报告,并促进了急诊和透析诊所之间网络的发展。
    结果:除了基本患者信息和诊断信息,处方,实验室数据,住院治疗,过敏,和来自不同设施的图像数据,有关于血液透析的具体信息,以及为灾难做准备时不可或缺的信息备份。截至2021年6月1日,宫城68家透析机构的12家诊所和10家医院参加了MMWIN。宫城接受血液透析的患者数量增加了40%以上。
    结论:我们的备份系统成功开发了血液透析设施网络。我们积累了有助于防止患者信息碎片化的数据,并有助于在不可预测的灾难期间有效地转移患者。
    BACKGROUND: After the Great East Japan Earthquake in 2011, backup systems for clinical information were launched in Japan. The system in Miyagi Prefecture called the Miyagi Medical and Welfare Information Network (MMWIN) is used as a health information exchange network to share clinical information among various medical facilities for patients who have opted in. Hospitals and clinics specializing in chronic renal failure require patients\' data and records during hemodialysis to facilitate communication in daily clinical activity and preparedness for disasters.
    OBJECTIVE: This study aimed to facilitate the sharing of clinical data of patients undergoing hemodialysis among different hemodialysis facilities.
    METHODS: We introduced a document-sharing system to make hemodialysis reports available on the MMWIN. We also recruited hospitals and clinics to share the hemodialysis reports of their patients and promoted the development of a network between emergency and dialysis clinics.
    RESULTS: In addition to basic patient information as well as information on diagnosis, prescription, laboratory data, hospitalization, allergy, and image data from different facilities, specific information about hemodialysis is available, as well as a backup of indispensable information in preparation for disasters. As of June 1, 2021, 12 clinics and 10 hospitals of 68 dialysis facilities in Miyagi participated in the MMWIN. The number of patients who underwent hemodialysis in Miyagi increased by more than 40%.
    CONCLUSIONS: Our backup system successfully developed a network of hemodialysis facilities. We have accumulated data that are beneficial to prevent the fragmentation of patient information and would be helpful in transferring patients efficiently during unpredictable disasters.
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  • 文章类型: Journal Article
    评价基于纹理特征的机器学习方法在多参数磁共振成像(mpMRI)中鉴别恶性和良性软组织肿瘤的性能。
    我们纳入了163例经病理证实的软组织肿瘤患者(71例恶性,92良性)。所有患者均行mpMRI。在T1加权成像(T1WI)上评估了十二个直方图和纹理参数,T2加权成像,弥散加权成像,表观扩散系数图,和对比增强T1WI成像。我们使用Welcht检验比较了来自恶性和良性肿瘤的所有序列的平均信号。预测模型是通过机器学习技术(支持向量机)使用每个序列的纹理特征开发的,临床资料(性别+年龄+肿瘤大小),以及包含所有特征的组合模型。使用五次交叉验证计算这些模型的接收器工作特征曲线(AUC)下的面积。
    临床信息模型(AUC0.85)的诊断能力不亚于具有每个序列的纹理特征的模型(AUC0.79-0.84)。组合模型显示出最高的诊断能力(AUC0.89)。组合模型的AUC(0.89)与两名董事会认证的放射科医生的AUC(0.89和0.87)相当。
    基于mpMRI和临床信息的纹理特征的机器学习方法提供了足够的诊断性能来区分恶性和良性软组织肿瘤。
    To evaluate the performance of a machine learning method to differentiate malignant from benign soft tissue tumors based on textural features on multiparametric magnetic resonance imaging (mpMRI).
    We enrolled 163 patients with soft tissue tumors whose diagnosis was pathologically proven (71 malignant, 92 benign). All patients underwent mpMRI. Twelve histographic and textural parameters were assessed on T1-weighted imaging (T1WI), T2-weighted imaging, diffusion-weighted imaging, apparent diffusion coefficient maps, and contrast-enhanced T1WI imaging. We compared mean signals of all sequences from the malignant and benign tumors using Welch\'s t-test. Prediction models were developed via a machine learning technique (support vector machine) using textural features of each sequence, clinical information (sex + age + tumor size), and the combined model incorporating all features. Areas under the receiver operating characteristic curves (AUCs) of these models were calculated using fivefold cross validation.
    The diagnostic ability of clinical information model (AUC 0.85) was not inferior to the model with textural features of each sequence (AUC 0.79-0.84). The combined model showed the highest diagnostic ability (AUC 0.89). The AUC of the combined model (0.89) was comparable to those of two board-certified radiologists (0.89 and 0.87).
    Machine learning methods based on textural features on mpMRI and clinical information offer adequate diagnostic performance to differentiate between malignant and benign soft tissue tumors.
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  • 文章类型: Journal Article
    目的:阿尔茨海默病是最常见的不可逆神经退行性疾病。它的症状范围从记忆障碍到多种认知能力的退化和最终死亡。轻度认知障碍(MCI)是发生在正常衰老和早期痴呆之间的最早可检测阶段,即使MCI受试者有机会恢复认知正常甚至保持不变,他们的病情每年都有进展为阿尔茨海默病(AD)的风险。因此,预测MCI受试者中的AD对于在进展的情况下在适当的时间开始治疗至关重要。如果保持稳定,对一致的医学观察的需求将消除。因此,我们的目标是通过利用一类称为卷积神经网络(CNN)的深度学习(DL)方法来诊断从MCI到AD的可能转换。
    方法:我们提出了一种三维CNN(3D-CNN)来组合和分析静息状态功能磁共振成像(rs-fMRI),临床评估结果,和人口统计信息,以预测从MCI到AD的转化,平均间隔为5年。最初,3D-CNN是基于来自81名受试者的266个样本的fMRI单卷开发的;然后,我们使用神经元层将临床数据与功能磁共振成像相结合,以改善结果.
    结果:首先,CNN模型的AUC为87.67%,准确率为85.7%,然后结合临床和rs-fMRI特征,我们观察到以下改进的分数:91.72%的AUC,准确率为87.6%,敏感性为75.58%,特异性为92.57%。
    结论:我们开发的算法成功地预测从MCI到AD的预后,证明了DL方法在解决问题方面的潜力以及根据所提出的方法将临床信息与成像整合的效率。
    OBJECTIVE: Alzheimer\'s is the most common irreversible neurodegenerative disease. Its symptoms range from memory impairments to degradation of multiple cognitive abilities and ultimately death. Mild cognitive impairment (MCI) is the earliest detectable stage that happens between normal aging and early dementia, and even though MCI subjects have a chance of changing back to cognitively normal or even staying the same, there is a risk that their condition progresses to Alzheimer\'s disease (AD) annually. Therefore predicting AD among MCI subjects is pivotal for starting treatments at an opportune time in case of progression, and if staying stable is the case, the need for consistent medical observations would eliminate. Thus, we aim to diagnose possible conversion from MCI to AD by exploiting a class of deep learning (DL) methods called convolutional neural network (CNN).
    METHODS: We proposed a three-dimensional CNN (3D-CNN) to combine and analyze resting-state functional magnetic resonance imaging (rs-fMRI), clinical assessment results, and demographic information to predict conversion from MCI to AD in an average 5-years interval. Initially, a 3D-CNN was developed based on fMRI single volumes of 266 samples from 81 subjects; then, we used neuron layers to combine clinical data with fMRI to improve the results.
    RESULTS: At first, the CNN model demonstrated an AUC of 87.67% and an accuracy of 85.7%, then after combining clinical and rs-fMRI features, we observed the following improved scores: an AUC of 91.72%, an accuracy of 87.6%, a sensitivity of 75.58% and a specificity of 92.57%.
    CONCLUSIONS: Our developed algorithm managed to predict prognosis from MCI to AD with high levels of accuracy, proving the potential of DL approaches in solving the matter and the efficiency of integrating clinical information with imaging according to the proposed method.
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