catch bond

  • 文章类型: Journal Article
    细胞感知和响应机械力的能力在许多生理和病理过程中是至关重要的。然而,确定力影响细胞内蛋白质功能的机制仍然具有挑战性。受荧光蛋白(FPs)经历荧光可逆机械切换的体外演示的启发,我们研究了是否可以在细胞中观察到FP功能的力敏感变化.以FP机械切换的计算模型为指导,我们开发了一种形式主义,用于在基于Förster共振能量转移(FRET)的生物传感器中进行检测,并证明了其在合成肌动蛋白交联剂和机械接头蛋白vinculin中的细胞中的出现。我们发现,在细胞中,机械转换是可逆的,并且通过操纵细胞力的产生而改变,外部刚度,和生物传感器的力敏键动力学。这项工作描述了评估FP机械稳定性的框架,并提供了一种探测细胞内力敏感蛋白功能的方法。
    The ability of cells to sense and respond to mechanical forces is critical in many physiological and pathological processes. However, determining the mechanisms by which forces affect protein function inside cells remains challenging. Motivated by in vitro demonstrations of fluorescent proteins (FPs) undergoing reversible mechanical switching of fluorescence, we investigated whether force-sensitive changes in FP function could be visualized in cells. Guided by a computational model of FP mechanical switching, we develop a formalism for its detection in Förster resonance energy transfer (FRET)-based biosensors and demonstrate its occurrence in cellulo within a synthetic actin crosslinker and the mechanical linker protein vinculin. We find that in cellulo mechanical switching is reversible and altered by manipulation of cell force generation, external stiffness, and force-sensitive bond dynamics of the biosensor. This work describes a framework for assessing FP mechanical stability and provides a means of probing force-sensitive protein function inside cells.
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  • 文章类型: Journal Article
    了解细胞力传递动力学在机械生物学中至关重要。我们开发了基于DNA的ForceChrono探针来测量力的大小,持续时间,和单分子水平的负载率在活细胞内。ForceChrono探针通过在动态细胞环境中进行直接测量来规避体外单分子力光谱学的局限性。我们的发现显示整合素的力加载速率为0.5-2pN/s,持续时间从新生粘连的数十秒到成熟粘连的约100s。探针的稳健和可逆设计允许在细胞经历形态转变时连续监测这些动态变化。此外,通过分析突变,删除,或药物干预会影响这些参数,我们可以推断特定蛋白质或结构域在细胞机械转导中的功能作用。ForceChrono探测器提供了对机械力动力学的详细见解,提高我们对细胞力学和机械传导的分子机制的理解。
    Understanding cellular force transmission dynamics is crucial in mechanobiology. We developed the DNA-based ForceChrono probe to measure force magnitude, duration, and loading rates at the single-molecule level within living cells. The ForceChrono probe circumvents the limitations of in vitro single-molecule force spectroscopy by enabling direct measurements within the dynamic cellular environment. Our findings reveal integrin force loading rates of 0.5-2 pN/s and durations ranging from tens of seconds in nascent adhesions to approximately 100 s in mature focal adhesions. The probe\'s robust and reversible design allows for continuous monitoring of these dynamic changes as cells undergo morphological transformations. Additionally, by analyzing how mutations, deletions, or pharmacological interventions affect these parameters, we can deduce the functional roles of specific proteins or domains in cellular mechanotransduction. The ForceChrono probe provides detailed insights into the dynamics of mechanical forces, advancing our understanding of cellular mechanics and the molecular mechanisms of mechanotransduction.
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  • 文章类型: Journal Article
    过继细胞疗法涉及将工程免疫细胞注入癌症患者以识别和消除肿瘤细胞。过继细胞疗法,作为一种活的药物,在过去的十年里经历了爆炸性的增长。T细胞受体(TCR)对肿瘤抗原的识别是免疫系统用于消除肿瘤细胞的自然机制之一。TCR-T细胞疗法,这涉及将外源性TCR引入患者的T细胞,是一种新的细胞治疗策略。TCR-T细胞疗法可以靶向癌细胞的整个蛋白质组。用外源性TCR改造T细胞以帮助患者对抗癌症,在临床试验中取得了成功。特别是在治疗实体瘤。在这次审查中,我们研究了过去五年中TCR-T细胞治疗的进展。这包括发现新的肿瘤抗原,TCR的蛋白质工程技术,TCR-T细胞治疗的重编程策略,TCR-T细胞治疗的临床研究,以及中国TCR-T细胞治疗的进展。我们还提出了TCR-T细胞治疗未来发展的几个潜在方向。
    Adoptive cell therapies involve infusing engineered immune cells into cancer patients to recognize and eliminate tumor cells. Adoptive cell therapy, as a form of living drug, has undergone explosive growth over the past decade. The recognition of tumor antigens by the T-cell receptor (TCR) is one of the natural mechanisms that the immune system used to eliminate tumor cells. TCR-T cell therapy, which involves introducing exogenous TCRs into patients\' T cells, is a novel cell therapy strategy. TCR-T cell therapy can target the entire proteome of cancer cells. Engineering T cells with exogenous TCRs to help patients combat cancer has achieved success in clinical trials, particularly in treating solid tumors. In this review, we examine the progress of TCR-T cell therapy over the past five years. This includes the discovery of new tumor antigens, protein engineering techniques for TCR, reprogramming strategies for TCR-T cell therapy, clinical studies on TCR-T cell therapy, and the advancement of TCR-T cell therapy in China. We also propose several potential directions for the future development of TCR-T cell therapy.
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  • 文章类型: Journal Article
    机械力对于αβT细胞受体(TCR)和肽结合的主要组织相容性复合物(pMHC)分子之间的相互作用至关重要,以启动生产性T细胞活化。然而,潜在机制尚不清楚.我们使用全原子分子动力学模拟来检查与HLA-A*02:01结合的A6TCR在不同延伸下呈递激动剂或拮抗剂肽,以模拟施加的负载对复合物的影响,阐明他们不同的生物反应。我们发现TCRα和β链不对称地运动,影响与pMHC的界面,特别是肽传感CDR3环。对于野生型激动剂,复合物以负载依赖的方式稳定,而拮抗剂使其不稳定。CβFG环缺失的模拟,这降低了渔获量的反应,和模拟中的突变肽进一步支持观察到的行为。本结果突出了域间运动的综合作用,波动的力量,和界面接触在通过TCR确定机械响应和精细肽辨别中,从而解决了TCRαβ-pMHC激动剂和拮抗剂复合物几乎相同的晶体结构的难题。
    Mechanical force is critical for the interaction between an αβ T cell receptor (TCR) and a peptide-bound major histocompatibility complex (pMHC) molecule to initiate productive T-cell activation. However, the underlying mechanism remains unclear. We use all-atom molecular dynamics simulations to examine the A6 TCR bound to HLA-A*02:01 presenting agonist or antagonist peptides under different extensions to simulate the effects of applied load on the complex, elucidating their divergent biological responses. We found that TCR α and β chains move asymmetrically, which impacts the interface with pMHC, in particular the peptide-sensing CDR3 loops. For the wild-type agonist, the complex stabilizes in a load-dependent manner while antagonists destabilize it. Simulations of the Cβ FG-loop deletion, which reduces the catch bond response, and simulations with in silico mutant peptides further support the observed behaviors. The present results highlight the combined role of interdomain motion, fluctuating forces, and interfacial contacts in determining the mechanical response and fine peptide discrimination by a TCR, thereby resolving the conundrum of nearly identical crystal structures of TCRαβ-pMHC agonist and antagonist complexes.
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  • 文章类型: Journal Article
    整合素α4β7与粘膜血管地址素细胞粘附分子-1(MAdCAM-1)之间的相互作用促进了炎症性肠病(IBD)中循环淋巴细胞与高内皮静脉表面的粘附。淋巴细胞粘附是涉及系链的多步骤级联反应,滚动,稳定的附着力,爬行,和细胞的迁移,整合素α4β7参与滚动和稳定的粘连。靶向整联蛋白α4β7-MAdCAM-1相互作用可能有助于减少IBD中的炎症。这种相互作用是由武力调节的;然而,潜在的机制仍然未知。这里,我们使用平行板流室和原子力显微镜研究这种机制。结果表明,整合素α4β7-MAdCAM-1相互作用的寿命最初增加,随后随着力的增加而减少。无论Ca2和/或Mg2的可用性如何,这都表现在通过捕获-粘结-滑移-粘结转化调节的两状态曲线中。相比之下,细胞的平均滚动速度最初随着力的增加而降低,然后增加,表明流动增强的附着力。在存在Mg2而不是Ca2的情况下,观察到单键的系链寿命更长,多键介导的滚动速度更低。当检查与用趋化因子CC基序配体25和MAdCAM-1共涂覆的基材的粘附性时,与用单独的MAdCAM-1涂覆的基材相反,获得类似的结果。总之,整联蛋白α4β7-MAdCAM-1相互作用通过离子和细胞因子依赖性流动增强的粘附过程发生,并通过捕获键机制调节。
    The interaction between integrin α4β7 and mucosal vascular addressin cell-adhesion molecule-1 (MAdCAM-1) facilitates the adhesion of circulating lymphocytes to the surface of high endothelial venules in inflammatory bowel diseases (IBDs). Lymphocyte adhesion is a multistep cascade involving the tethering, rolling, stable adhesion, crawling, and migration of cells, with integrin α4β7 being involved in rolling and stable adhesions. Targeting the integrin α4β7-MAdCAM-1 interaction may help decrease inflammation in IBDs. This interaction is regulated by force; however, the underlying mechanism remains unknown. Here, we investigate this mechanism using a parallel plate flow chamber and atomic force microscopy. The results reveal an initial increase in the lifetime of the integrin α4β7-MAdCAM-1 interaction followed by a decrease with an increasing force. This was manifested in a two-state curve regulated via a catch-bond-slip-bond conversion regardless of Ca2+ and/or Mg2+ availability. In contrast, the mean rolling velocity of cells initially decreased and then increased with the increasing force, indicating the flow-enhanced adhesion. Longer tether lifetimes of single bonds and lower rolling velocities mediated by multiple bonds were observed in the presence of Mg2+ rather than Ca2+. Similar results were obtained when examining the adhesion to substrates co-coated with chemokine CC motif ligand 25 and MAdCAM-1, as opposed to substrates coated with MAdCAM-1 alone. In conclusion, the integrin α4β7-MAdCAM-1 interaction occurs via ion- and cytokine-dependent flow-enhanced adhesion processes and is regulated via a catch-bond mechanism.
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  • 文章类型: Journal Article
    许多类型的癌细胞过表达庞大的糖蛋白以形成厚的糖萼层。糖萼将细胞与周围环境物理分离,但是最近的工作表明,糖萼可以矛盾地增加对软组织的粘附,从而促进癌细胞的转移。这种令人惊讶的现象发生是因为糖萼迫使细胞表面的粘附分子(称为整合素)成簇。这些整联蛋白簇具有协同作用,使得它们与周围组织形成比使用相等数量的未聚集的整联蛋白可能更强的粘附。近年来,这些合作机制受到了严格审查。对糖萼介导的粘附的生物物理基础的更细致的理解可以揭示治疗目标,加深我们对癌症转移的一般认识,并阐明远远超出癌症研究领域的一般生物物理过程。这项工作检查了以下假设:糖萼具有增加成簇整合素所经历的机械张力的额外作用。整合素充当机械传感器,进行捕获键合-意味着相对于经历低张力的整合素的寿命,施加适度的张力会增加整合素的键合寿命。在这项工作中,整合素张力的三态化学机械捕获键模型用于研究在庞大的糖萼存在下的捕获键。应用伪稳态近似,这依赖于这样的假设,即整合素键动力学的发生时间比质膜和基材之间的完全粘附力的演变要快得多。力相关的动力学速率常数用于计算高斯形粘附几何形状的整联蛋白-配体键的稳态分布。然后在存在和不存在捕获键的情况下分析系统能量与粘附几何形状之间的关系,以评估捕获键改变粘附形成能量的程度。这个模型表明,一个庞大的糖萼可以轻微地触发捕获结合,将整合素在粘附边缘的结合寿命增加高达100%。对于某些粘附几何形状,粘附内的整联蛋白-配体键的总数预计增加高达~60%。预测捕获键合会降低〜1-4kBT的粘附形成活化能,这意味着粘附成核的动力学速率增加了~3-50倍。这项工作表明,整合素力学和聚类可能都有助于糖萼介导的转移。
    Many types of cancer cells overexpress bulky glycoproteins to form a thick glycocalyx layer. The glycocalyx physically separates the cell from its surroundings, but recent work has shown that the glycocalyx can paradoxically increase adhesion to soft tissues and therefore promote the metastasis of cancer cells. This surprising phenomenon occurs because the glycocalyx forces adhesion molecules (called integrins) on the cell\'s surface into clusters. These integrin clusters have cooperative effects that allow them to form stronger adhesions to surrounding tissues than would be possible with equivalent numbers of un-clustered integrins. These cooperative mechanisms have been intensely scrutinized in recent years. A more nuanced understanding of the biophysical underpinnings of glycocalyx-mediated adhesion could uncover therapeutic targets, deepen our general understanding of cancer metastasis, and elucidate general biophysical processes that extend far beyond the realm of cancer research. This work examines the hypothesis that the glycocalyx has the additional effect of increasing mechanical tension experienced by clustered integrins. Integrins function as mechanosensors that undergo catch bonding-meaning the application of moderate tension increases integrin bond lifetime relative to the lifetime of integrins experiencing low tension. In this work, a three-state chemomechanical catch bond model of integrin tension is used to investigate catch bonding in the presence of a bulky glycocalyx. A pseudo-steady-state approximation is applied, which relies on the assumption that integrin bond dynamics occur on a much faster timescale than the evolution of the full adhesion between the plasma membrane and the substrate. Force-dependent kinetic rate constants are used to calculate a steady-state distribution of integrin-ligand bonds for Gaussian-shaped adhesion geometries. The relationship between the energy of the system and adhesion geometry is then analyzed in the presence and absence of catch bonding in order to evaluate the extent to which catch bonding alters the energetics of adhesion formation. This modeling suggests that a bulky glycocalyx can lightly trigger catch bonding, increasing the bond lifetime of integrins at adhesion edges by up to 100%. The total number of integrin-ligand bonds within an adhesion is predicted to increase by up to ~ 60% for certain adhesion geometries. Catch bonding is predicted to decrease the activation energy of adhesion formation by ~ 1-4 kBT, which translates to a ~ 3-50 × increase in the kinetic rate of adhesion nucleation. This work reveals that integrin mechanics and clustering likely both contribute to glycocalyx-mediated metastasis.
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  • 文章类型: Journal Article
    αβT细胞是机械传感器,可在免疫监视期间利用生物力进行高度敏感和特异性的抗原识别。单分子研究用于描述初始TCRαβ-pMHC结合事件,和各种生物物理参数可以被识别。在盖玻片上分离纯化的TCRαβ和pMHC分子允许直接测量系统中的动力学和构象变化,并沿负载途径去除可能干扰或掩盖细微变化的细胞成分。光学镊子提供高分辨率的位置和力的信息,映射键合轮廓,包括渔获债券,以及测量由力驱动的不同构象变化的能力。本方法描述了单分子光学镊子测定设置,考虑因素,和执行。该模型可用于各种TCR-pMHC对或扩展以测量在多种生物系统中有效的多种受体-配体相互作用。
    αβ T cells are mechanosensors that leverage bioforces during immune surveillance for highly sensitive and specific antigen discrimination. Single-molecule studies are used to profile the initial TCRαβ-pMHC binding event, and various biophysical parameters can be identified. Isolating purified TCRαβ and pMHC molecules on a coverslip allows for direct measurements of the kinetics and conformational changes in the system and removes cellular components along the load pathway that may interfere with or mask subtle changes. Optical tweezers provide high resolution position and force information that map the bonding profile, including catch bond, and the ability to measure distinct conformational changes driven by forces. The present method describes the single-molecule optical tweezers assay setup, considerations, and execution. This model can be used for various TCR-pMHC pairs or expanded to measure a wide variety of receptor-ligand interactions operative in multiple biological systems.
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  • 文章类型: Journal Article
    T细胞抗原受体(TCR)是机械传感器,在配体识别后启动信号级联,导致T细胞分化,稳态,效应和调节功能。与荧光结合的光学陷阱允许响应于在各种浓度的肽结合的主要组织相容性复合物分子(pMHC)下施加的力而直接监测T细胞触发。该技术模拟在免疫监视期间细胞爬行穿过抗原呈递表面时施加的生理剪切力。对单细胞进行的真正的单分子研究轮廓力键寿命,通常被视为捕获键,在力加载时,细胞表面TCR-pMHC键的构象变化。一起,激活和单分子单细胞研究提供了化学和物理触发阈值,以及对单个TCR的捕获键形成和四级结构变化的见解。本方法详细介绍了测定设计,准备,和执行,以及数据分析。这些方法可以应用于广泛的pMHC-TCR相互作用,并且具有适应其他受体-配体系统的潜力。
    T-cell antigen receptors (TCRs) are mechanosensors, which initiate a signaling cascade upon ligand recognition resulting in T-cell differentiation, homeostasis, effector and regulatory functions. An optical trap combined with fluorescence permits direct monitoring of T-cell triggering in response to force application at various concentrations of peptide-bound major histocompatibility complex molecules (pMHC). The technique mimics physiological shear forces applied as cells crawl across antigen-presenting surfaces during immune surveillance. True single molecule studies performed on single cells profile force-bond lifetime, typically seen as a catch bond, and conformational change at the TCR-pMHC bond on the surface of the cell upon force loading. Together, activation and single molecule single cell studies provide chemical and physical triggering thresholds as well as insight into catch bond formation and quaternary structural changes of single TCRs. The present methods detail assay design, preparation, and execution, as well as data analysis. These methods may be applied to a wide range of pMHC-TCR interactions and have potential for adaptation to other receptor-ligand systems.
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  • 文章类型: Journal Article
    皮肤经常暴露于以不同结果修复的损伤中,再生或疤痕。疤痕是由整合素传递的细胞物理力调节的纤维化过程产生的。纤连蛋白(FN)是组装以修复皮肤创伤的临时基质中的主要组分。FN使α5β1/αIIbβ3和αv类整联蛋白与RGD基序的细胞粘附结合。α5/αIIb的另一个连接是位于RGD基序附近的协同位点。损害FN协同作用区(Fn1syn/syn)的突变表明,其缺失允许完全发育。然而,只有与FN协同位点的额外接合,细胞才能有效抵抗物理力。为了测试协同位点介导的粘附如何影响伤口愈合纤维化的过程,我们使用FNsyn上的角质形成细胞和成纤维细胞的皮肤损伤小鼠模型和体外迁移研究。FN协同作用位点的丧失导致由活化角质形成细胞的两个相反的迁移缺陷引起的正常再上皮化,在真皮中,诱导减少纤维化反应,肌成纤维细胞和FN沉积含量较低,TGF-β1介导的细胞信号传导减弱。我们证明,减弱的α5β1介导的FNsyn牵引力会导致TGF-β1从其潜在复合物中的释放减少。
    Skin is constantly exposed to injuries that are repaired with different outcomes, either regeneration or scarring. Scars result from fibrotic processes modulated by cellular physical forces transmitted by integrins. Fibronectin (FN) is a major component in the provisional matrix assembled to repair skin wounds. FN enables cell adhesion binding of α5β1/αIIbβ3 and αv-class integrins to an RGD-motif. An additional linkage for α5/αIIb is the synergy site located in close proximity to the RGD motif. The mutation to impair the FN synergy region (Fn1syn/syn) demonstrated that its absence permits complete development. However, only with the additional engagement to the FN synergy site do cells efficiently resist physical forces. To test how the synergy site-mediated adhesion affects the course of wound healing fibrosis, we used a mouse model of skin injury and in-vitro migration studies with keratinocytes and fibroblasts on FNsyn. The loss of FN synergy site led to normal re-epithelialization caused by two opposing migratory defects of activated keratinocytes and, in the dermis, induced reduced fibrotic responses, with lower contents of myofibroblasts and FN deposition and diminished TGF-β1-mediated cell signalling. We demonstrate that weakened α5β1-mediated traction forces on FNsyn cause reduced TGF-β1 release from its latent complex.
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  • 文章类型: Journal Article
    大肠杆菌的FimH蛋白是一种模型的两结构域粘附素,能够介导细菌细胞附着的变构捕获键机制,其中甘露糖结合凝集素域从与甘露糖快速结合的“非活性”构象转换为与甘露糖缓慢脱离的“活性”构象。因为机械拉力有利于域的分离,因此,FimH激活,已经认为,捕获键只能表现为流体剪切依赖性粘附模式。这里,我们使用具有减弱的结构域间相互作用的重组FimH变体,并显示FimH的快速和持续的变构激活也可以在静态下发生,非剪切条件。此外,似乎凝集素结构域构象激活本质上以恒定的速率发生,独立于其与pilin结构域或甘露糖相互作用的能力。然而,后两个因素控制着FimH的失活率。因此,在广泛的流体动力学条件下,变构捕获键机制可能是一种广泛的现象,涉及快速和强烈的细胞-病原体附着。变形物可以实现更有效的受体-配体相互作用的概念与变形物提供在特定条件下关闭结合的机制的传统观念根本不同。
    The FimH protein of Escherichia coli is a model two-domain adhesin that is able to mediate an allosteric catch bond mechanism of bacterial cell attachment, where the mannose-binding lectin domain switches from an \'inactive\' conformation with fast binding to mannose to an \'active\' conformation with slow detachment from mannose. Because mechanical tensile force favors separation of the domains and, thus, FimH activation, it has been thought that the catch bonds can only be manifested in a fluidic shear-dependent mode of adhesion. Here, we used recombinant FimH variants with a weakened inter-domain interaction and show that a fast and sustained allosteric activation of FimH can also occur under static, non-shear conditions. Moreover, it appears that lectin domain conformational activation happens intrinsically at a constant rate, independently from its ability to interact with the pilin domain or mannose. However, the latter two factors control the rate of FimH deactivation. Thus, the allosteric catch bond mechanism can be a much broader phenomenon involved in both fast and strong cell-pathogen attachments under a broad range of hydrodynamic conditions. This concept that allostery can enable more effective receptor-ligand interactions is fundamentally different from the conventional wisdom that allostery provides a mechanism to turn binding off under specific conditions.
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