brain MRI

脑部 MRI
  • 文章类型: Case Reports
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  • 文章类型: Journal Article
    背景:定量磁化率图(QSM)是一种后处理技术,可创建通过组织磁化率反映金属负荷的脑磁化率图。我们评估了有和没有威尔逊病(WD)的参与者之间磁化率的地形差异,将这些发现与临床严重程度相关联,脑容量,和生物流体铜和铁指数。
    方法:共有43例WD患者和20例未受影响的对照组,被招募。QSM图像来自3TMRI扫描仪。使用最小统一威尔逊病评定量表(M-UWDRS)和蒙特利尔认知评估评分来定义临床严重程度。使用一般线性回归模型评估组间磁化率的差异,调整年龄和性别。使用Spearman方法分析敏感性与临床评分之间的相关性。
    结果:在年龄和性别调整分析中,与对照组相比,WD患者的磁化率值增加,包括尾状核,壳核,苍白球,黑质(均p<0.01)。最初的神经精神表现(n=25)比最初的肝功能障碍(n=18;p=0.04)更大。几乎所有地形区域的易感性变化与区域脑体积呈负相关。血清铁蛋白,但不是血清铜或铜蓝蛋白,与尾状核的磁化率水平呈正相关(p=0.04),壳核(p=0.04)和海马(p=0.03)。皮质区域的磁化率高于皮质下区域的优势与M-UWDRS评分相关(p<0.01)。
    结论:磁化率变化可以作为WD患者的替代指标。
    BACKGROUND: Quantitative susceptibility mapping (QSM) is a post-processing technique that creates brain susceptibility maps reflecting metal burden through tissue magnetic susceptibility. We assessed topographic differences in magnetic susceptibility between participants with and without Wilson\'s disease (WD), correlating these findings with clinical severity, brain volume, and biofluid copper and iron indices.
    METHODS: A total of 43 patients with WD and 20 unaffected controls, were recruited. QSM images were derived from a 3T MRI scanner. Clinical severity was defined using the minimal Unified Wilson\'s Disease Rating Scale (M-UWDRS) and Montreal Cognitive Assessment scoring. Differences in magnetic susceptibilities between groups were evaluated using general linear regression models, adjusting for age and sex. Correlations between the susceptibilities and clinical scores were analyzed using Spearman\'s method.
    RESULTS: In age- and sex-adjusted analyses, magnetic susceptibility values were increased in WD patients compared with controls, including caudate nucleus, putamen, globus pallidus, and substantia nigra (all p < 0.01). Putaminal susceptibility was greater with an initial neuropsychiatric presentation (n = 25) than with initial hepatic dysfunction (n = 18; p = 0.04). Susceptibility changes correlated negatively with regional brain volume in almost all topographic regions. Serum ferritin, but not serum copper or ceruloplasmin, correlated positively with magnetic susceptibility level in the caudate nucleus (p = 0.04), putamen (p = 0.04) and the hippocampus (p = 0.03). The dominance of magnetic susceptibility in cortical over subcortical regions correlated with M-UWDRS scores (p < 0.01).
    CONCLUSIONS: The magnetic susceptibility changes could serve as a surrogate marker for patients with WD.
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  • 文章类型: Journal Article
    扩散概率模型(DPM)在计算机视觉任务中表现出显著的有效性,特别是在图像生成方面。然而,他们显著的表现在很大程度上依赖于标记的数据集,由于相关的高成本注释限制了它们在医学图像中的应用。当前医学成像中与DPM相关的病变检测方法,可以分为两种不同的方法,主要依赖于图像级注释。第一种方法,基于异常检测,涉及学习参考健康的大脑表示,并根据推理结果的差异识别异常。相比之下,第二种方法,类似于分割任务,仅使用原始大脑多模态作为生成像素级注释的先验信息。在本文中,我们提出的模型-差异分布医学扩散(DDMD)-用于脑部MRI中的病变检测,通过结合独特的差异特征引入了一种新颖的框架,偏离了对图像级注释或原始大脑模式的传统直接依赖。在我们的方法中,图像级注释中的不一致性被转化为异质样本之间的分布差异,同时保留了同质样本中的信息。此属性保留了像素方面的不确定性,并促进了分割的隐式集成,最终提高整体检测性能。在包含用于脑肿瘤检测的多模态MRI扫描的BRATS2020基准数据集上进行的彻底实验表明,与最先进的方法相比,我们的方法具有出色的性能。
    Diffusion probabilistic models (DPMs) have exhibited significant effectiveness in computer vision tasks, particularly in image generation. However, their notable performance heavily relies on labelled datasets, which limits their application in medical images due to the associated high-cost annotations. Current DPM-related methods for lesion detection in medical imaging, which can be categorized into two distinct approaches, primarily rely on image-level annotations. The first approach, based on anomaly detection, involves learning reference healthy brain representations and identifying anomalies based on the difference in inference results. In contrast, the second approach, resembling a segmentation task, employs only the original brain multi-modalities as prior information for generating pixel-level annotations. In this paper, our proposed model - discrepancy distribution medical diffusion (DDMD) - for lesion detection in brain MRI introduces a novel framework by incorporating distinctive discrepancy features, deviating from the conventional direct reliance on image-level annotations or the original brain modalities. In our method, the inconsistency in image-level annotations is translated into distribution discrepancies among heterogeneous samples while preserving information within homogeneous samples. This property retains pixel-wise uncertainty and facilitates an implicit ensemble of segmentation, ultimately enhancing the overall detection performance. Thorough experiments conducted on the BRATS2020 benchmark dataset containing multimodal MRI scans for brain tumour detection demonstrate the great performance of our approach in comparison to state-of-the-art methods.
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  • 文章类型: Journal Article
    脑磁共振成像(MRI)在临床上广泛用于疾病诊断。然而,由于硬件的不同,在不同部位获得的MRI扫描可能具有不同的外观,脉冲序列,和成像参数。重要的是通过脑MRI协调来减少或消除这种跨位点变化,以便一致地执行下游图像处理和分析。先前关于协调问题的工作需要从感兴趣的站点获取的数据进行模型训练。但是在现实世界的场景中,在模型训练后,可以有来自新的感兴趣站点的测试数据,并且在训练模型时,来自新站点的训练数据不可用。在这种情况下,以前的方法不能最佳地处理来自新的看不见的站点的测试数据。为了解决这个问题,在这项工作中,我们探索了用于脑MRI协调的领域概括,并提出了站点混合(SiMix)。我们假设在一些现有站点获取旅行对象的图像以进行模型训练。为了使训练数据更好地表示来自看不见的站点的测试数据,我们首先建议随机混合属于不同地点的训练图像,这大大增加了训练数据的多样性,同时保持了混合训练图像的真实性。第二,在测试时间,当来自看不见的网站的测试图像被给出时,我们提出了一种多视图策略,该策略以保留的真实性干扰测试图像,并整合了干扰图像的协调结果,以提高协调质量。要验证SiMix,我们对公开的SRPBS数据集和MUSHAC数据集进行了实验,这些数据集包括在9个和2个不同地点获得的脑MRI,分别。结果表明,SiMix改善了未知部位的脑MRI协调,这也有利于现有网站的统一。
    Brain magnetic resonance imaging (MRI) is widely used in clinical practice for disease diagnosis. However, MRI scans acquired at different sites can have different appearances due to the difference in the hardware, pulse sequence, and imaging parameter. It is important to reduce or eliminate such cross-site variations with brain MRI harmonization so that downstream image processing and analysis is performed consistently. Previous works on the harmonization problem require the data acquired from the sites of interest for model training. But in real-world scenarios there can be test data from a new site of interest after the model is trained, and training data from the new site is unavailable when the model is trained. In this case, previous methods cannot optimally handle the test data from the new unseen site. To address the problem, in this work we explore domain generalization for brain MRI harmonization and propose Site Mix (SiMix). We assume that images of travelling subjects are acquired at a few existing sites for model training. To allow the training data to better represent the test data from unseen sites, we first propose to mix the training images belonging to different sites stochastically, which substantially increases the diversity of the training data while preserving the authenticity of the mixed training images. Second, at test time, when a test image from an unseen site is given, we propose a multiview strategy that perturbs the test image with preserved authenticity and ensembles the harmonization results of the perturbed images for improved harmonization quality. To validate SiMix, we performed experiments on the publicly available SRPBS dataset and MUSHAC dataset that comprised brain MRI acquired at nine and two different sites, respectively. The results indicate that SiMix improves brain MRI harmonization for unseen sites, and it is also beneficial to the harmonization of existing sites.
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  • 文章类型: Journal Article
    目的:合成的FLAIR(流体衰减反转恢复)图像的图像质量通常不如常规图像,尤其是病变对比不匹配。这项工作旨在通过混合方法改善病变外观。
    方法:我们将全脑5分钟MR-STAT采集和FLAIR合成步骤与超采样的常规FLAIR序列相结合,并对患者数据集和健康志愿者进行了该方法的回顾性和前瞻性分析。
    结果:建议的混合FLAIR图像在患者数据集上的所有性能指标均显着高于基于物理的FLAIR图像(p<0.005),与传统FLAIR图像相当。健康志愿者的前瞻性和回顾性分析之间的微小差异证明了针对患者数据集提出的混合方法的回顾性分析的有效性。
    结论:与基于物理学的FLAIR图像相比,拟议的混合FLAIR在神经系统疾病的临床病例中获得了改善的病变外观,未来对患者数据的前瞻性工作将通过对更大的患者队列中的新图像进行放射学检查,从诊断的角度解决该方法的验证。
    OBJECTIVE: The image quality of synthetized FLAIR (fluid attenuated inversion recovery) images is generally inferior to its conventional counterpart, especially regarding the lesion contrast mismatch. This work aimed to improve the lesion appearance through a hybrid methodology.
    METHODS: We combined a full brain 5-min MR-STAT acquisition followed by FLAIR synthetization step with an ultra-under sampled conventional FLAIR sequence and performed the retrospective and prospective analysis of the proposed method on the patient datasets and a healthy volunteer.
    RESULTS: All performance metrics of the proposed hybrid FLAIR images on patient datasets were significantly higher than those of the physics-based FLAIR images (p < 0.005), and comparable to those of conventional FLAIR images. The small difference between prospective and retrospective analysis on a healthy volunteer demonstrated the validity of the retrospective analysis of the hybrid method as presented for the patient datasets.
    CONCLUSIONS: The proposed hybrid FLAIR achieved an improved lesion appearance in the clinical cases with neurological diseases compared to the physics-based FLAIR images, Future prospective work on patient data will address the validation of the method from a diagnostic perspective by radiological inspection of the new images over a larger patient cohort.
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  • 文章类型: Case Reports
    孤立性纤维瘤(SFTs)是一种罕见的间充质肿瘤,可发生在脑室,提出诊断和管理挑战。我们描述了一个没有明显病史的21岁男性,他出现间歇性头痛和呕吐,持续的症状。神经系统检查无异常。脑部MRI显示左侧侧脑室枕角有等强度病变,诊断为SFT。经皮质手术切除是成功的,术后放疗。这个案例突出了诊断和治疗脑室内SFT的复杂性,强调需要全面评估和多式联运管理策略。
    Solitary fibrous tumors (SFTs) are rare mesenchymal neoplasms that can occur intraventricularly, presenting diagnostic and management challenges. We describe a case of a 21-year-old male with no significant medical history who presented with intermittent headaches and vomiting, progressing to continuous symptoms. Neurological examination was unremarkable. Brain MRI revealed an isointense lesion in the occipital horn of the left lateral ventricle, diagnosed as an SFT. Surgical excision via a transcortical approach was successful, followed by postoperative radiotherapy. This case highlights the complexities in diagnosing and treating intraventricular SFTs, emphasizing the need for comprehensive evaluation and multimodal management strategies.
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  • 文章类型: Case Reports
    由ATP结合盒亚家族D成员1(ABCD1)基因缺陷引起的X连锁肾上腺脑白质营养不良(X-ALD)是最常见的遗传性过氧化物酶体疾病。主要涉及小脑和脑干的女性小脑-脑干优势型非常罕见。我们报告了一名40岁的女性,主要通过磁共振成像(MRI)和遗传分析被诊断为罕见疾病。她的最初症状是进行性言语不清和写作障碍。她的脑部MRI显示脑干和小脑明显萎缩。她没有肾上腺功能不全。遗传分析表明ABCD1编码区外显子4杂合错义突变(c.125C>T,p.Arg418Trp)。这是关于这种特殊突变与X-ALD的小脑-脑干显性表型相关的第一份报告,以及在(杂合)女性患者中对该X-ALD变体的首次描述。对于进展缓慢的共济失调和构音障碍的中青年患者,应考虑X-ALD。
    X-linked adrenoleukodystrophy (X-ALD) caused by ATP-binding cassette subfamily D member 1 (ABCD1) gene defects is the most common inherited peroxisomal disorder.The female cerebello-brainstem dominant type in which cerebellum and brainstem are mainly involved is very rare. We report a 40-year-old female who was diagnosed as the rare disorder with magnetic resonance imaging (MRI) and genetic analysis mainly. Her initial symptoms were progressive slurred speech and writing disturbance. Her brain MRI showed obvious atrophy of brainstem and cerebellum. She did not have adrenal insufficiency. Genetic analysis showed a heterozygous missense mutation in exon 4 of the coding region of ABCD1 (c.1252C > T, p.Arg418Trp).This is the first report of this particular mutation being associated with the cerebello-brainstem dominant phenotype of X-ALD, as well as the first description of this X-ALD variant in a (heterozygous) female patient.X-ALD should be considered in young and middle-aged patients with slow-progressing ataxia and dysarthria.
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  • 文章类型: Letter
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  • 文章类型: Journal Article
    先前对自闭症谱系障碍(ASD)的研究表明小脑和脑干的重要体积改变。然而,大多数这些研究仅限于临床样本较小的病例对照研究,主要包括儿童或青少年。在这里,我们旨在探索累积遗传负荷(多基因风险评分,PRS)用于ASD和小脑和脑干的体积改变,以及人口水平的成年人大脑的整体脑组织体积。我们利用了精神病学遗传学协会对ASD的最新全基因组关联研究(18,381例,27,969个对照),并在一个独立的队列中构建了ASDPRS,英国生物银行进行了回归分析,以进行多重比较,错误发现率(FDR)为5%,以调查约31,000名参与者中ASDPRS与44种脑磁共振成像(MRI)表型之间的关联。主要分析包括16种MRI表型:大脑总体积,脑脊液(CSF),灰质(GM),白质(WM),整个小脑的GM,脑干,和小脑的十个区域(I_IV,V,VI,VIIb,VIIIa,VIIIb,IX,X,克鲁斯和克鲁斯二世)。次要分析包括28种MRI表型:小脑的亚区域体积,包括Vermis的GM以及每个小脑区域的左右小叶。ASDPRS与七个大脑区域的体积显着相关,较高的PRS与整个大脑的体积减少有关,WM,脑干,和小脑I-IV区,IX,X,和CSF的体积增加。三个次区域体积,包括左小脑小叶I-IV,小脑vermesVIIIb,和X与ASDPRS呈显著负相关。这项研究强调了ASD易感性之间的实质性联系,其潜在的遗传病因,和成人大脑的神经解剖学改变。
    Previous research on autism spectrum disorders (ASD) have showed important volumetric alterations in the cerebellum and brainstem. Most of these studies are however limited to case-control studies with small clinical samples and including mainly children or adolescents. Herein, we aimed to explore the association between the cumulative genetic load (polygenic risk score, PRS) for ASD and volumetric alterations in the cerebellum and brainstem, as well as global brain tissue volumes of the brain among adults at the population level. We utilized the latest genome-wide association study of ASD by the Psychiatric Genetics Consortium (18,381 cases, 27,969 controls) and constructed the ASD PRS in an independent cohort, the UK Biobank. Regression analyses controlled for multiple comparisons with the false-discovery rate (FDR) at 5% were performed to investigate the association between ASD PRS and forty-four brain magnetic resonance imaging (MRI) phenotypes among ~ 31,000 participants. Primary analyses included sixteen MRI phenotypes: total volumes of the brain, cerebrospinal fluid (CSF), grey matter (GM), white matter (WM), GM of whole cerebellum, brainstem, and ten regions of the cerebellum (I_IV, V, VI, VIIb, VIIIa, VIIIb, IX, X, CrusI and CrusII). Secondary analyses included twenty-eight MRI phenotypes: the sub-regional volumes of cerebellum including the GM of the vermis and both left and right lobules of each cerebellar region. ASD PRS were significantly associated with the volumes of seven brain areas, whereby higher PRS were associated to reduced volumes of the whole brain, WM, brainstem, and cerebellar regions I-IV, IX, and X, and an increased volume of the CSF. Three sub-regional volumes including the left cerebellar lobule I-IV, cerebellar vermes VIIIb, and X were significantly and negatively associated with ASD PRS. The study highlights a substantial connection between susceptibility to ASD, its underlying genetic etiology, and neuroanatomical alterations of the adult brain.
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  • 文章类型: Journal Article
    由于存在正流形(所有认知测试均呈正相关),因此检查特定认知能力的潜在神经结构相关性实际上和理论上都很复杂:如果大脑结构与认知任务相关,其中有多少与认知领域唯一相关,以及有多少是由于与所有其他领域的测试的协方差(由一般认知功能捕获,也被称为一般智力,or\'g\')?WequantitallyaddressthisquestionbyexaminingassociationbetweenbrainstructuralanddiffusionMRImeasures(globalorganizationvolumes,白质高强度,全局白质扩散分数各向异性和平均扩散率,和FreeSurfer处理的顶点皮层体积,在20mmfwhm处平滑)与g和认知域(处理速度,结晶能力,记忆,视觉空间能力)。使用验证性因子分析对认知域进行建模,以使用13项认知测试对来自洛锡安出生队列1936年研究的697名参与者进行分层和双因素解决方案(平均年龄72.5岁;SD=.7)。为每个领域提取的认知因子得分和g之间的关联计算了每个大脑测量值的年龄协方差,性别和颅内体积,并纠正了错误发现率。认知域和全局MRI脑结构测量之间存在一系列显著关联(r范围.008至.269,p<.05)。顶点区域皮质体积所涉及的区域包括额叶的大量内侧和外侧区域,颞叶和顶叶。然而,在全球和区域层面,大部分领域-MRI关联是共有的(统计学上由g表示).从认知域中消除g相关方差会使与全局脑MRI测量值的关联幅度降低27.9-59.7%(M=46.2%),只有处理速度保留所有重要的关联。在区域皮层水平,g似乎占区域特定领域关联的大多数(范围22.1-88.4%;在认知领域中M=52.8%)。结晶和记忆域几乎没有独特的皮质相关,而处理速度和视觉空间能力保留了有限的皮质体积关联。认知域的最大空间重叠(用g表示)存在于内侧和外侧颞叶,外侧顶叶和外侧额叶区域。
    Examining underlying neurostructural correlates of specific cognitive abilities is practically and theoretically complicated by the existence of the positive manifold (all cognitive tests positively correlate): if a brain structure is associated with a cognitive task, how much of this is uniquely related to the cognitive domain, and how much is due to covariance with all other tests across domains (captured by general cognitive functioning, also known as general intelligence, or \'g\')? We quantitatively address this question by examining associations between brain structural and diffusion MRI measures (global tissue volumes, white matter hyperintensities, global white matter diffusion fractional anisotropy and mean diffusivity, and FreeSurfer processed vertex-wise cortical volumes, smoothed at 20mm fwhm) with g and cognitive domains (processing speed, crystallised ability, memory, visuospatial ability). The cognitive domains were modelled using confirmatory factor analysis to derive both hierarchical and bifactor solutions using 13 cognitive tests in 697 participants from the Lothian Birth Cohort 1936 study (mean age 72.5 years; SD = .7). Associations between the extracted cognitive factor scores for each domain and g were computed for each brain measure covarying for age, sex and intracranial volume, and corrected for false discovery rate. There were a range of significant associations between cognitive domains and global MRI brain structural measures (r range .008 to .269, p < .05). Regions implicated by vertex-wise regional cortical volume included a widespread number of medial and lateral areas of the frontal, temporal and parietal lobes. However, at both global and regional level, much of the domain-MRI associations were shared (statistically accounted for by g). Removing g-related variance from cognitive domains attenuated association magnitudes with global brain MRI measures by 27.9-59.7% (M = 46.2%), with only processing speed retaining all significant associations. At the regional cortical level, g appeared to account for the majority (range 22.1-88.4%; M = 52.8% across cognitive domains) of regional domain-specific associations. Crystallised and memory domains had almost no unique cortical correlates, whereas processing speed and visuospatial ability retained limited cortical volumetric associations. The greatest spatial overlaps across cognitive domains (as denoted by g) were present in the medial and lateral temporal, lateral parietal and lateral frontal areas.
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