balancing weights

平衡配重
  • 文章类型: Journal Article
    当违反积极性假设时,如何分析数据?文献中存在几种可能的解决方案。在本文中,我们考虑了观察性研究中常用的倾向评分(PS)方法,以在违反阳性假设的情况下评估因果治疗效果.我们专注于并研究了逆概率加权(IPW)修剪和截断的四个特定替代解决方案:匹配权重(MW),香农的熵权(EW),重叠重量(OW),和β权重(BW)估计器。我们首先确定他们的目标人群,临床平衡的患者群体,也就是说,我们有足够的PS重叠。然后,我们建立了不同的相应权重(和估计器)之间的联系;这使得我们能够强调这些估计器的共同性质和理论意义。最后,我们引入了他们的增广估计器,该估计器利用倾向评分和结果回归模型来提高治疗效果估计器的偏倚和效率.我们还阐明了OW估计器作为所有这些针对重叠人群的方法的旗舰的作用。我们的分析结果表明,MW,当存在适度或极端(随机或结构)违反积极性假设时,EW优于IPW和某些BW情况。然后我们评估,比较,并通过蒙特卡罗模拟证实上述估计器的有限样本性能。最后,我们使用两个以违反积极性假设为标志的真实世界数据示例来说明这些方法。
    How to analyze data when there is violation of the positivity assumption? Several possible solutions exist in the literature. In this paper, we consider propensity score (PS) methods that are commonly used in observational studies to assess causal treatment effects in the context where the positivity assumption is violated. We focus on and examine four specific alternative solutions to the inverse probability weighting (IPW) trimming and truncation: matching weight (MW), Shannon\'s entropy weight (EW), overlap weight (OW), and beta weight (BW) estimators. We first specify their target population, the population of patients for whom clinical equipoise, that is, where we have sufficient PS overlap. Then, we establish the nexus among the different corresponding weights (and estimators); this allows us to highlight the shared properties and theoretical implications of these estimators. Finally, we introduce their augmented estimators that take advantage of estimating both the propensity score and outcome regression models to enhance the treatment effect estimators in terms of bias and efficiency. We also elucidate the role of the OW estimator as the flagship of all these methods that target the overlap population. Our analytic results demonstrate that OW, MW, and EW are preferable to IPW and some cases of BW when there is a moderate or extreme (stochastic or structural) violation of the positivity assumption. We then evaluate, compare, and confirm the finite-sample performance of the aforementioned estimators via Monte Carlo simulations. Finally, we illustrate these methods using two real-world data examples marked by violations of the positivity assumption.
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  • 文章类型: Journal Article
    在一项集群观察研究中,将治疗分配给组,并且组内的所有单位都暴露于治疗。我们开发了一种使用近似平衡权重在集群观察研究中进行统计调整的新方法,逆倾向得分权重的推广,用于解决凸优化问题,以找到一组直接最小化协变量不平衡度量的权重,受到权重方差的额外惩罚。我们通过得出均方误差的上界并找到最小化该上界的权重,将近似平衡权重优化问题定制为聚类观察研究设置。将协变量平衡的水平与偏差的界限联系起来。我们通过将绑定具体化为随机聚类级别的效果模型来实现该过程,导致方差惩罚,其中包含信噪比,并根据类内相关性不同地惩罚个体的权重和群体的总重量。
    In a clustered observational study, a treatment is assigned to groups and all units within the group are exposed to the treatment. We develop a new method for statistical adjustment in clustered observational studies using approximate balancing weights, a generalization of inverse propensity score weights that solve a convex optimization problem to find a set of weights that directly minimize a measure of covariate imbalance, subject to an additional penalty on the variance of the weights. We tailor the approximate balancing weights optimization problem to the clustered observational study setting by deriving an upper bound on the mean square error and finding weights that minimize this upper bound, linking the level of covariate balance to a bound on the bias. We implement the procedure by specializing the bound to a random cluster-level effects model, leading to a variance penalty that incorporates the signal-to-noise ratio and penalizes the weight on individuals and the total weight on groups differently according to the the intra-class correlation.
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  • 文章类型: Journal Article
    随机对照试验是衡量因果效应的金标准。然而,它们通常并不总是可行的,因果治疗效果必须从观察数据中估计。观察性研究不允许关于因果关系的有力结论,除非统计技术解释了不同组之间预处理混杂因素的不平衡,并且关键假设成立。倾向评分和平衡加权(PSBW)是有用的技术,旨在通过对观察到的混杂因素进行加权来减少治疗组之间观察到的不平衡。值得注意的是,有许多方法可用于估计PSBW。然而,目前尚不清楚先验哪种方法可以在给定应用的协变量平衡和有效样本量之间实现最佳权衡。此外,至关重要的是评估对所需治疗效果进行稳健估计所需的关键假设的有效性,包括重叠和没有不可测量的混杂假设。我们提供了使用PSBW估算因果治疗效果的分步指南,其中包括如何在分析之前评估重叠的步骤。使用多种方法获得PSBW的估计,并选择最优方法,检查多个指标上的协变量平衡,并评估研究结果(估计的治疗效果和统计学意义)对未观察到的混杂因素的敏感性。我们使用案例研究来说明关键步骤,该案例研究检查了物质使用治疗程序的相对有效性,并提供了一个用户友好的Shiny应用程序,该应用程序可以通过二元处理实现任何应用程序的建议步骤。
    Randomized controlled trials are the gold standard for measuring causal effects. However, they are often not always feasible, and causal treatment effects must be estimated from observational data. Observational studies do not allow robust conclusions about causal relationships unless statistical techniques account for the imbalance of pretreatment confounders across groups and key assumptions hold. Propensity score and balance weighting (PSBW) are useful techniques that aim to reduce the observed imbalances between treatment groups by weighting the groups to look alike on the observed confounders. Notably, there are many methods available to estimate PSBW. However, it is unclear a priori which will achieve the best trade-off between covariate balance and effective sample size for a given application. Moreover, it is critical to assess the validity of key assumptions required for robust estimation of the needed treatment effects, including the overlap and no unmeasured confounding assumptions. We present a step-by-step guide to the use of PSBW for estimation of causal treatment effects that includes steps on how to evaluate overlap before the analysis, obtain estimates of PSBW using multiple methods and select the optimal one, check for covariate balance on multiple metrics, and assess sensitivity of findings (both the estimated treatment effect and statistical significance) to unobserved confounding. We illustrate the key steps using a case study examining the relative effectiveness of substance use treatment programs and provide a user-friendly Shiny application that can implement the proposed steps for any application with binary treatments.
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  • 文章类型: Journal Article
    背景:COVID-19大流行的爆发对医疗保健服务的消费产生了重大影响。常规诊断检查使用的变化,急性后COVID-19综合征(PCS)的发病率增加,和其他大流行相关因素可能影响检测到的临床状况。
    目的:本研究旨在分析COVID-19对门诊医学影像服务的使用及其临床发现的影响,特别关注以色列COVID-19疫苗接种运动启动后的时间段。此外,这项研究测试了观察到的异常发现的增加是否可能与PCS或COVID-19疫苗接种有关.
    方法:我们的数据集包括国家卫生组织从2019年1月1日至2021年8月31日的572,480名动态医学成像患者。我们比较了大流行之前和之后的不同医学影像利用指标和临床发现,以确定显着变化。我们还检查了大流行期间在调整医学影像利用变化后异常发现率的变化。最后,对于显示异常发现率增加的成像类,我们测量了SARS-CoV-2感染之间的因果关系,COVID-19相关住院(提示COVID-19并发症),和COVID-19疫苗接种和未来异常发现的风险。为了适应多种混杂因素,我们使用了因果推断方法。
    结果:由于第一次COVID-19波而导致常规医学成像的利用率最初下降后,这些检查的数量有所增加,但老年患者的比例较低,有合并症的患者,女人,和疫苗犹豫的患者。此外,我们观察到异常发现率的显著提高,特别是在肌肉骨骼磁共振(MR-MSK)和脑计算机断层扫描(CT-brain)检查中。在调整医学成像利用率的变化后,这些结果也仍然存在。已证明的因果关联包括:SARS-CoV-2感染增加了CT-脑部检查异常发现的风险(比值比[OR]1.4,95%CI1.1-1.7)和COVID-19相关住院增加了MR-MSK检查异常发现的风险(OR3.1,95%CI1.9-5.3)。
    结论:COVID-19影响了动态影像学检查的使用,在COVID-19并发症风险较高的患者中避免更多:老年患者,有合并症的患者,和未接种疫苗的患者。因果分析结果表明,PCS可能有助于在MR-MSK和CT脑部检查中观察到的异常发现的增加。
    BACKGROUND: The outbreak of the COVID-19 pandemic had a major effect on the consumption of health care services. Changes in the use of routine diagnostic exams, increased incidences of postacute COVID-19 syndrome (PCS), and other pandemic-related factors may have influenced detected clinical conditions.
    OBJECTIVE: This study aimed to analyze the impact of COVID-19 on the use of outpatient medical imaging services and clinical findings therein, specifically focusing on the time period after the launch of the Israeli COVID-19 vaccination campaign. In addition, the study tested whether the observed gains in abnormal findings may be linked to PCS or COVID-19 vaccination.
    METHODS: Our data set included 572,480 ambulatory medical imaging patients in a national health organization from January 1, 2019, to August 31, 2021. We compared different measures of medical imaging utilization and clinical findings therein before and after the surge of the pandemic to identify significant changes. We also inspected the changes in the rate of abnormal findings during the pandemic after adjusting for changes in medical imaging utilization. Finally, for imaging classes that showed increased rates of abnormal findings, we measured the causal associations between SARS-CoV-2 infection, COVID-19-related hospitalization (indicative of COVID-19 complications), and COVID-19 vaccination and future risk for abnormal findings. To adjust for a multitude of confounding factors, we used causal inference methodologies.
    RESULTS: After the initial drop in the utilization of routine medical imaging due to the first COVID-19 wave, the number of these exams has increased but with lower proportions of older patients, patients with comorbidities, women, and vaccine-hesitant patients. Furthermore, we observed significant gains in the rate of abnormal findings, specifically in musculoskeletal magnetic resonance (MR-MSK) and brain computed tomography (CT-brain) exams. These results also persisted after adjusting for the changes in medical imaging utilization. Demonstrated causal associations included the following: SARS-CoV-2 infection increasing the risk for an abnormal finding in a CT-brain exam (odds ratio [OR] 1.4, 95% CI 1.1-1.7) and COVID-19-related hospitalization increasing the risk for abnormal findings in an MR-MSK exam (OR 3.1, 95% CI 1.9-5.3).
    CONCLUSIONS: COVID-19 impacted the use of ambulatory imaging exams, with greater avoidance among patients at higher risk for COVID-19 complications: older patients, patients with comorbidities, and nonvaccinated patients. Causal analysis results imply that PCS may have contributed to the observed gains in abnormal findings in MR-MSK and CT-brain exams.
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  • 文章类型: Journal Article
    比较有效性研究的一个共同目标是评估对患者预设亚群的治疗效果。虽然广泛用于医学研究,这种亚组分析(SGA)的因果推断方法仍然不发达,特别是在观察性研究中。在这篇文章中,我们为因果SGA开发了一套分析方法和可视化工具。首先,我们介绍了亚组加权平均治疗效果的估计和,并提供了相应的倾向评分加权估计.我们证明,子组内的平衡协变量限制了子组因果效应估计器的偏差。第二,我们建议使用重叠加权(OW)方法来实现子组内的精确平衡。我们进一步提出了一种结合OW和LASSO的方法,以平衡SGA中的偏差-方差权衡。最后,我们设计了一个新的诊断图-Connect-S图-用于可视化亚组协变量平衡。进行了广泛的仿真研究,以将所提出的方法与几种现有方法进行比较。我们将提出的方法应用于以患者为中心的子宫肌瘤(COMPARE-UF)注册数据,以评估子宫肌瘤的替代治疗方案,以缓解症状和生活质量。
    A common goal in comparative effectiveness research is to estimate treatment effects on prespecified subpopulations of patients. Though widely used in medical research, causal inference methods for such subgroup analysis (SGA) remain underdeveloped, particularly in observational studies. In this article, we develop a suite of analytical methods and visualization tools for causal SGA. First, we introduce the estimand of subgroup weighted average treatment effect and provide the corresponding propensity score weighting estimator. We show that balancing covariates within a subgroup bounds the bias of the estimator of subgroup causal effects. Second, we propose to use the overlap weighting (OW) method to achieve exact balance within subgroups. We further propose a method that combines OW and LASSO, to balance the bias-variance tradeoff in SGA. Finally, we design a new diagnostic graph-the Connect-S plot-for visualizing the subgroup covariate balance. Extensive simulation studies are presented to compare the proposed method with several existing methods. We apply the proposed methods to the patient-centered results for uterine fibroids (COMPARE-UF) registry data to evaluate alternative management options for uterine fibroids for relief of symptoms and quality of life.
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  • 文章类型: Journal Article
    慢性疾病的管理通常需要适应患者随时间变化的病情的治疗顺序。适应性治疗策略(ATS)由个性化治疗规则组成,该规则将在整个疾病过程中应用,该规则在决策时输入患者的特征并输出推荐的治疗。最佳ATS是定制治疗的序列,其对于具有相似特征的患者产生最佳临床结果。估计最佳适应性治疗策略的方法,必须解开短期和长期治疗效果,从理论上讲可能涉及并且很难向临床医生解释,特别是当要优化的结果是受权利审查的生存时间时。在本文中,我们描述了动态加权生存建模,一种估计具有生存结果的最佳苯丙胺类兴奋剂的方法。使用来自临床实践研究数据链的数据,一个大型的初级保健数据库,我们说明了它如何回答有关2型糖尿病治疗的重要临床问题。我们确定了当二甲双胍单药治疗未达到治疗目标时推荐的ATS药物。
    Sequences of treatments that adapt to a patient\'s changing condition over time are often needed for the management of chronic diseases. An adaptive treatment strategy (ATS) consists of personalized treatment rules to be applied through the course of a disease that input the patient\'s characteristics at the time of decision-making and output a recommended treatment. An optimal ATS is the sequence of tailored treatments that yields the best clinical outcome for patients sharing similar characteristics. Methods for estimating optimal adaptive treatment strategies, which must disentangle short- and long-term treatment effects, can be theoretically involved and hard to explain to clinicians, especially when the outcome to be optimized is a survival time subject to right-censoring. In this paper, we describe dynamic weighted survival modeling, a method for estimating an optimal ATS with survival outcomes. Using data from the Clinical Practice Research Datalink, a large primary-care database, we illustrate how it can answer an important clinical question about the treatment of type 2 diabetes. We identify an ATS pertaining to which drug add-ons to recommend when metformin in monotherapy does not achieve the therapeutic goals.
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