aquatic

水生
  • 文章类型: Journal Article
    纳米植物修复是一种从环境中去除有毒污染物的新型绿色技术。体外再生的花叶草(L.)在二氧化钛纳米颗粒(TiO2NP)存在的情况下,将植物暴露于不同浓度的铬(Cr)和暴露时间。响应面法用于多种统计分析,如回归分析和优化图。NPs的补充显着影响水中的Cr和Cr的去除(%),而NP×暴露时间(T)在统计上调节所有输出参数。萤火虫元启发式算法和随机森林(Firefly-RF)机器学习算法被合并以优化超参数,旨在实现预测模型的最高精度。水中Cr的R2得分记录为0.956,电厂Cr为0.987,生物富集系数(BCF)为0.992,通过Firefly-RF模型去除Cr为0.957。研究结果表明,与响应面方法相比,随机森林模型具有出色的预测性能。结论是金属基纳米粒子(NPs)可以有效地用于重金属的纳米植物修复。这项研究揭示了纳米颗粒在纳米植物修复中的应用前景。这项研究有望为未来的研究铺平道路,促进进一步探索各种纳米颗粒,并全面评估其在水生生态系统中的潜力。
    Nano-phytoremediation is a novel green technique to remove toxic pollutants from the environment. In vitro regenerated Ceratophyllum demersum (L.) plants were exposed to different concentrations of chromium (Cr) and exposure times in the presence of titania nanoparticles (TiO2NPs). Response surface methodology was used for multiple statistical analyses like regression analysis and optimizing plots. The supplementation of NPs significantly impacted Cr in water and Cr removal (%), whereas NP × exposure time (T) statistically regulated all output parameters. The Firefly metaheuristic algorithm and the random forest (Firefly-RF) machine learning algorithms were coalesced to optimize hyperparameters, aiming to achieve the highest level of accuracy in predicted models. The R2 scores were recorded as 0.956 for Cr in water, 0.987 for Cr in the plant, 0.992 for bioconcentration factor (BCF), and 0.957 for Cr removal through the Firefly-RF model. The findings illustrated superior prediction performance from the random forest models when compared to the response surface methodology. The conclusion is drawn that metal-based nanoparticles (NPs) can effectively be utilized for nano-phytoremediation of heavy metals. This study has uncovered a promising outlook for the utilization of nanoparticles in nano-phytoremediation. This study is expected to pave the way for future research on the topic, facilitating further exploration of various nanoparticles and a thorough evaluation of their potential in aquatic ecosystems.
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  • 文章类型: Journal Article
    识别人为影响的影响需要实施生物指标,以量化自然陆地和水生生态系统对扰动和转化的敏感性和脆弱性。尽管巴西的法律法规承认生物指标在监测水质方面的价值,土壤条件的贬值尚未得到足够的重视。因此,我们的研究旨在评估牙齿动物(蜻蜓和豆娘)作为两栖生物指标的潜力,以反映牧场为主的景观中水生和陆地栖息地退化之间的相关性。我们评估了Odonata的生物指数与巴西大草原40条溪流中与人为改变的牧场相邻的保留河岸景观的保护状况之间的关系。我们的结果支持以下假设:Odonata物种组成可能是土壤和水完整性的替代指标,使它们成为有前途的哨兵,以检测环境退化并指导人类改变的景观中的保护策略。重要的是,虽然Zygoptera/Anisoptera物种比率是巴西森林中有用的生物指示工具,在这里开放的大草原上效果较差,因此需要一个替代索引。重要的是,虽然Zygoptera/Anisoptera物种比率是巴西森林中有用的生物指示工具,在这里开放的大草原上效果较差,因此需要一个替代索引。另一方面,我们的结果表明,蜻蜓生物指数是评估巴西大草原淡水栖息地的合适工具。我们还在环境完整性谱的两端确定了某些生物指示物种。
    Discerning the impact of anthropogenic impacts requires the implementation of bioindicators that quantify the susceptibilities and vulnerabilities of natural terrestrial and aquatic ecosystems to perturbation and transformation. Although legal regulations in Brazil recognize the value of bioindicators in monitoring water quality, the depreciation of soil conditions has yet to receive adequate attention. Thus, our study aimed to evaluate the potential of odonates (dragonflies and damselflies) as amphibiotic bioindicators to reflect the correlation between the degradation of aquatic and terrestrial habitats in pasture-dominated landscapes. We assessed the relationship between the biotic indices of Odonata and the conservation status of preserved riparian landscapes adjacent to anthropogenically altered pastures in 40 streams in the Brazilian savannah. Our results support the hypothesis that Odonata species composition may be a surrogate indicator for soil and water integrity, making them promising sentinels for detecting environmental degradation and guiding conservation strategies in human-altered landscapes. Importantly, while the Zygoptera/Anisoptera species ratio is a useful bioindicator tool in Brazilian forest, it is less effective in the open savannah here, and so an alternative index is required. Importantly, while the Zygoptera/Anisoptera species ratio is a useful bioindicator tool in Brazilian forest, it is less effective in the open savannah here, and so an alternative index is required. On the other hand, our results showed the Dragonfly Biotic Index to be a suitable tool for assessing freshwater habitats in Brazilian savannah. We also identified certain bioindicator species at both ends of the environment intactness spectrum.
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  • 文章类型: Journal Article
    亚马逊河流域非凡的社会生态系统由不同的水阶段维持,通量,和横跨热带安第斯山脉的商店,亚马逊低地,和大西洋。这种“安第斯山脉-亚马逊-大西洋”(AAA)途径是一个复杂的水文气候系统,由区域水循环通过大气环流和大陆水文学联系在一起。这里,我们的目标是阐明AAA水文气候途径作为研究的基础系统,管理,养护,以及亚马逊河流域水生系统的治理。我们将AAA通路识别并描述为相互依存的,多方向,和多尺度水文气候系统。然后,我们对AAA途径的最近(1981年至2020年)变化进行了评估,主要反映了水文通量速率的加速(即,水循环强化)。我们讨论了不断变化的AAA途径如何协调和影响社会生态系统。最后,我们提出了正在进行的研究中AAA途径可持续性的四项建议,管理,养护,和治理。
    The Amazon River Basin\'s extraordinary social-ecological system is sustained by various water phases, fluxes, and stores that are interconnected across the tropical Andes mountains, Amazon lowlands, and Atlantic Ocean. This \"Andes-Amazon-Atlantic\" (AAA) pathway is a complex hydroclimatic system linked by the regional water cycle through atmospheric circulation and continental hydrology. Here, we aim to articulate the AAA hydroclimate pathway as a foundational system for research, management, conservation, and governance of aquatic systems of the Amazon Basin. We identify and describe the AAA pathway as an interdependent, multidirectional, and multiscale hydroclimate system. We then present an assessment of recent (1981 to 2020) changes in the AAA pathway, primarily reflecting an acceleration in the rates of hydrologic fluxes (i.e., water cycle intensification). We discuss how the changing AAA pathway orchestrates and impacts social-ecological systems. We conclude with four recommendations for the sustainability of the AAA pathway in ongoing research, management, conservation, and governance.
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  • 文章类型: Journal Article
    目前,在巴西,所有参与动物实验的研究人员都必须接受实验动物科学培训,以保持生物学的最新信息,方法论,伦理,以及与使用动物有关的法律考虑。本研究中提出的培训计划不仅旨在履行法律义务,而且还旨在培训学生和专业人员有效地照顾他们的生物模型。它试图帮助他们理解这种护理的重要性,为了动物的福利和他们项目的结果。总的来说,58名参与者参加了活动(活动前和全日制课程)。这些参与者包括来自11个机构和5个不同国家的学生和专业人士。这些数字表明在科学界成功实现了所需的毛细管作用以及知识的后期传播。通过这门课程,有可能培训参与者并提高他们对在日常实践中应用科学知识来维护动物的重要性的认识,确保模型的福利,完善研究。最后,这项研究中提出的方案,以及所采取的策略,可以作为其他旨在实现类似结果的机构的典范。
    Currently, in Brazil, all researchers involved in animal experimentation must undergo training in laboratory animal science to stay updated on biology, methodology, ethics, and legal considerations related to the use of animals. The training program presented in this study not only aims to fulfill a legal obligation but also intends to train students and professionals to effectively care for their biomodels. It seeks to help them understand the importance of this care, both for the welfare of the animals and for the results of their projects. In total, 58 participants were present at the event (pre-event and full-time course). These participants consisted students and professionals from 11 institutions and 5 different countries. These numbers demonstrate the successful attainment of the desired capillarity in the scientific community and the posterior dissemination of knowledge. Through this course, it was possible to train the participants and raise their awareness about the importance of applying scientific knowledge in their daily practices to maintain the animals, ensuring the welfare of the models and refining the research. Finally, the program presented in this study, as well as the strategies adopted, can serve as a model for other institutions aiming to achieve similar results.
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  • 文章类型: Journal Article
    对水生动物健康重要的病原体中的抗菌素耐药性(AMR)日益受到关注,但研究不足。抗微生物疗法用于治疗和预防鱼类的细菌性疾病,对于可行的水产养殖业和维持野生鱼类种群至关重要。不幸的是,对于从水生动物宿主中回收的细菌,表型抗菌药物敏感性测试在技术上是困难的,导致使用传统方法进行耐药性监测面临挑战。全基因组测序为研究推定抗性提供了一种有吸引力的方法。作为FDACVMVet-LIRN监测AMR的持续努力的一部分,源实验室培养并初步鉴定了从2019年从美国各地收集的各种鱼类中分离出的致病菌。使用全基因组测序评估了61个细菌分离株。我们在这里介绍组装的基因组草案,AMR基因,预测的抗性表型,和61个分离株的毒力因子,并讨论源实验室使用基质辅助激光解吸/飞行时间质谱进行鉴定的一致性。
    Antimicrobial resistance (AMR) in pathogens important to aquatic animal health is of increasing concern but vastly understudied. Antimicrobial therapy is used to both treat and prevent bacterial disease in fish and is critical for a viable aquaculture industry and for maintenance of wild fish populations. Unfortunately, phenotypic antimicrobial susceptibility testing is technically difficult for bacteria recovered from aquatic animal hosts resulting in challenges in resistance monitoring using traditional methods. Whole-genome sequencing provides an appealing methodology for investigation of putative resistance. As part of the ongoing efforts of the FDA CVM Vet-LIRN to monitor AMR, source laboratories cultured and preliminarily identified pathogenic bacteria isolated from various fish species collected in 2019 from across the United States. Sixty-one bacterial isolates were evaluated using whole-genome sequencing. We present here the assembled draft genomes, AMR genes, predicted resistance phenotypes, and virulence factors of the 61 isolates and discuss concurrence of the identifications made by source laboratories using matrix-assisted laser desorption/time-of-flight mass spectrometry.
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  • 文章类型: Journal Article
    菌株LB-N7T,一个新的革兰氏阴性,橙色,半透明,滑翔,杆状细菌,在2015年的黄细菌感染爆发期间,从智利一个养鱼场的大西洋鲑鱼(Salmosalar)的开放系统中收集的水样中分离出来。基于16SrRNA序列(1337bp)的系统发育分析显示,菌株LB-N7T属于黄杆菌属,与阿黄杆菌属A2-1T(98.8%)和黄瓜黄杆菌属R2A45-3T(96.75%)密切相关。菌株LB-N7T的基因组大小为2.93Mb,DNAGC含量为32.6mol%。基因组比较将菌株LB-N7T与鸡黄杆菌NJ-26T分组,恶臭黄杆菌HXWNR29T,乳酸黄杆菌TH16-21T和速生黄杆菌TWA-26T。LB-N7T菌株与最密切相关的黄杆菌属菌株之间计算的数字DNA-DNA杂交值为23.3%,平均核苷酸同一性值为71.52%至79.39%。甲基萘醌MK-6是主要的呼吸醌,其次是MK-7。主要脂肪酸为iso-C15:0和antiso-C15:0。检测到的主要极性脂质包括9种身份不明的脂质,两种量的氨基磷脂和磷脂,和少量的氨基脂质。表型,基因组,和化学分类学数据表明,菌株LB-N7T(=CECT30406T=RGM3221T)是一种新的细菌物种,为此命名为精神黄杆菌sp。11月。是提议的。
    Strain LB-N7T, a novel Gram-negative, orange, translucent, gliding, rod-shaped bacterium, was isolated from water samples collected from an open system of Atlantic salmon (Salmo salar) smolts in a fish farm in Chile during a flavobacterial infection outbreak in 2015. Phylogenetic analysis based on 16S rRNA sequences (1337 bp) revealed that strain LB-N7T belongs to the genus Flavobacterium and is closely related to the type strains Flavobacterium ardleyense A2-1T (98.8 %) and Flavobacterium cucumis R2A45-3T (96.75 %). The genome size of strain LB-N7T was 2.93 Mb with a DNA G+C content 32.6 mol%. Genome comparisons grouped strain LB-N7T with Flavobacterium cheniae NJ-26T, Flavobacterium odoriferum HXWNR29T, Flavobacterium lacisediminis TH16-21T and Flavobacterium celericrescens TWA-26T. The calculated digital DNA-DNA hybridization values between strain LB-N7T and the closest related Flavobacterium strains were 23.3 % and the average nucleotide identity values ranged from 71.52 to 79.39 %. Menaquinone MK-6 was the predominant respiratory quinone, followed by MK-7. The major fatty acids were iso-C15 : 0 and anteiso-C15 : 0. The primary polar lipids detected included nine unidentified lipids, two amounts of aminopospholipid and phospholipids, and a smaller amount of aminolipid. Phenotypic, genomic, and chemotaxonomic data suggest that strain LB-N7T (=CECT 30406T=RGM 3221T) represents as a novel bacterial species, for which the name Flavobacterium psychraquaticum sp. nov. is proposed.
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  • 文章类型: Journal Article
    本文阐明了水生环境中令人担忧的抗生素耐药性(ABR)问题,探索其对生态系统和公共卫生的不利影响。它研究了抗生素在水产养殖中的多方面作用,农业径流,和工业废物促进抗性细菌的发展和传播。各种环境因素之间错综复杂的相互作用,水平基因转移,全面讨论了细菌胞外囊泡(BEV)在加速ABR传播中的作用。各种携带抗性基因的BEV,如blaCTX-M,tetA,floR,和sul/I,以及它们对多重耐药细菌的主导地位的贡献,被突出显示。探讨了BEV作为对抗ABR的威胁和工具的潜力,有希望的策略,如靶向抗菌药物递送系统和益生菌衍生的电动汽车,具有显著的前景。本文强调了了解水生环境中BEV和ABR之间复杂相互作用的紧迫性。通过解开这些看不见的武器,我们为制定有效的策略来缓解ABR的传播铺平道路,倡导包括严格法规在内的多学科方法,强化废水处理,以及在水产养殖中采用可持续的做法。
    This paper sheds light on the alarming issue of antibiotic resistance (ABR) in aquatic environments, exploring its detrimental effects on ecosystems and public health. It examines the multifaceted role of antibiotic use in aquaculture, agricultural runoff, and industrial waste in fostering the development and dissemination of resistant bacteria. The intricate interplay between various environmental factors, horizontal gene transfer, and bacterial extracellular vesicles (BEVs) in accelerating the spread of ABR is comprehensively discussed. Various BEVs carrying resistance genes like blaCTX-M, tetA, floR, and sul/I, as well as their contribution to the dominance of multidrug-resistant bacteria, are highlighted. The potential of BEVs as both a threat and a tool in combating ABR is explored, with promising strategies like targeted antimicrobial delivery systems and probiotic-derived EVs holding significant promise. This paper underscores the urgency of understanding the intricate interplay between BEVs and ABR in aquatic environments. By unraveling these unseen weapons, we pave the way for developing effective strategies to mitigate the spread of ABR, advocating for a multidisciplinary approach that includes stringent regulations, enhanced wastewater treatment, and the adoption of sustainable practices in aquaculture.
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  • 文章类型: Journal Article
    微小核病毒科是甲壳类动物感染病毒,被认为会导致水生生物群落的死亡。三个来自Carcinusmaenas,Panulirusargus,和Dikerogammarus血吸虫。我们从44种两栖动物物种中筛选了202种SRA数据集(NCBI)的新型微小核病毒。来自Gammaruslacustris的三个转移组数据集包含与Dikerogammarus血吸虫微小核病毒相似的序列。大会产生了19份成绩单,16个被推定为多顺反子。假定的Gammaruslacustris微小核病毒与其他微小核病毒共有46个同源物(相似性范围:24.07-78.2%)。来自该推定病毒的转录物突出了其与微小核病毒科的可能关联。
    The Mininucleoviridae are crustacean-infecting viruses thought to drive mortality across aquatic biomes. Three have been characterised from Carcinus maenas, Panulirus argus, and Dikerogammarus haemobaphes. We screened 202 SRA datasets (NCBI) for novel mininucleoviruses from 44 amphipod species. Three metatranscriptome datasets from Gammarus lacustris contained sequences with similarity to Dikerogammarus haemobaphes mininucleovirus. Assembly resulted in 19 transcripts, 16 were putatively polycistronic. The putative Gammarus lacustris mininucleovirus shares 46 homologues with other mininucleoviruses (similarity range: 24.07 - 78.2 %). The transcripts from this putative virus highlight its likely association with the Mininucleoviridae.
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  • 文章类型: Journal Article
    水球运动员在保持对对手的战术位置时会受益于更大的成功几率。本研究评估了复制该技能的水基抗性测试的可靠性和有效性。33名水球运动员参加了这项研究(19名男性和14名女性,14名来自高级国家队,19名来自初级国家队)。数据是在两次定期培训期间收集的,相隔一周,使用称重传感器来测量游泳池甲板上的重量堆叠电阻设置。性能参数,如平均力,最大力,使用自定义Python脚本定义平均峰值力和总冲量。使用类内相关性(ICCl3,1)评估重测信度。在男女球员之间进行了小组比较。显著性水平设定为p<0.05。平均力的可靠性结果高到非常高,最大力,平均峰值力,行程间范围,和总冲动(ICC0.85-0.93,p<0.01)。组比较显示,对于这些变量(p<0.01,ES=1.05-9.36),男性球员的值明显更大,效果大小很大。然而,性别之间的耐力没有显着差异(p=0.88,ES=0.04)。这项研究提出了一种使用简单且价格合理的设备进行现场应用的具有令人满意的计量质量的方法。与水球队一起工作的从业者可以很容易地在各种训练环境中复制本研究中提供的测试设备。教练可以使用这种方法来评估单个球员的进度或比较一组水球球员的表现。
    Water polo players benefit from greater odds of success when maintaining their tactical position against their opponents. This study evaluated the reliability and validity of a water-based resistance test to replicate this skill.Thirty-three water polo players participated in this study (19 males and 14 females, 14 from senior and 19 from junior national teams). Data were collected during two regular training sessions, separated by one week, using a load cell to instrument a weight stack resistance setup on the pool deck. Performance parameters such as mean force, maximum force, mean peak force and total impulse were defined with custom Python scripts. Test-retest reliability was assessed using intra-class correlations (ICC3,1). Group comparisons were explored between male and female players. Level of significance was set at p < 0.05. The reliability findings were high to very high for the mean force, maximum force, mean peak force, inter-stroke range, and total impulse (ICC 0.85-0.93, p < 0.01). Group comparisons showed significantly greater values in male players for these variables (p < 0.01, ES = 1.05-9.36) with large to very large effect sizes. However, there was no significant difference in endurance measured between sexes (p = 0.88, ES = 0.04). This study presents a methodology with satisfactory metrological qualities for field applications using simple and affordable equipment. The testing apparatus presented in this study can readily be replicated in a variety of training environments by practitioners working with water polo teams. Coaches can use this approach to evaluate individual player progress or to compare performance across a group of water polo players.
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  • 文章类型: Journal Article
    在本研究中,使用来自CapeFold山(CFM)和大悬崖(Drakensberg山脉)的物种的mtDNA序列数据,检查了淡水蟹(Potamonautes)山枝中的进化关系。我们进行了系统发育分析,发散时间估计,以及祖先地区的重建,以探索该高原进化枝的形成时期并了解其生物地理历史。此外,我们使用ASAP应用了四种物种划界方法,bPTP,bGMYC,和后一种进化枝的STACEY。贝叶斯系统发育分析检索到了由两个主要姐妹进化枝组成的单系淡水蟹进化枝,一个由CapeFold(进化枝A)组成,两个由Drakensberg山脉(进化枝B)组成。发散时间估计表明,这两个进化枝经历了Mio/上新世枝层形成。在CFM进化枝(A)内,P.amathole(Amathola山脉)是P.parvispina(Cederberg和Kouebokkeveld山脉)的姐妹,后者是P.parvicorpus(开普半岛,Jonkershoek,和Helderberg山脉)的姐姐P.tuerkayi(奥弗伯格山脉)和P.brincki(霍滕托特荷兰山脉)。在Drakensberg山进化枝(B)内,我们观察到原位多样化。来自德拉肯斯堡山脉中南部的标本(DargleForest,因贾苏提,Karkloof,和Impendle)代表一个新的未描述的谱系Potamonautessp。11月。1.来自北部德拉肯斯堡的第二个进化枝,代表P.Clarus,是中央德拉肯斯堡山脉进化枝的姐妹,该进化枝包括P.depressus,而P.depressus又是来自东开普省的P.baziya的姐妹。物种定界方法的应用普遍高估了物种的数量。生物地理分析表明,东开普省是最有可能的祖先地区。进化枝A(CapeFoldMountains)和进化枝B(DrakensbergMountains)的代表物种的生态位模型表明,温度和降雨是区分这两个进化枝的主要非生物驱动因素。我们的数据支持山脉梯度形态假说。
    During the present study, the evolutionary relationship within a clade of mountain clade of freshwater crabs (Potamonautes) was examined using mtDNA sequence data for species from the Cape Fold Mountain (CFM) and Great Escarpment (Drakensberg Mountain range). We undertook phylogenetic analyses, divergence time estimation, and an ancestral area reconstruction to explore the period of cladogenesis and understand the biogeographic history in this high-altitude clade. Furthermore, we applied four species delimitation methods using ASAP, bPTP, bGMYC, and STACEY on the latter clade. Bayesian phylogenetic analyses retrieved a monophyletic freshwater crab clade comprised of two major sister clades, one comprised of the Cape Fold (clade A) and two comprised of Drakensberg Mountains (clade B) species. Divergence time estimation indicated that the two clades underwent Mio/Pliocene cladogenesis. Within the CFM clade (A), P. amathole (Amathola Mountains) was sister to P. parvispina (Cederberg and Kouebokkeveld Mountains) and the latter species were sister to P. parvicorpus (Cape Peninsula, Jonkershoek, and Helderberg Mountains) sister to P. tuerkayi (Overberg Mountains) and P. brincki (Hottentots Holland Mountains). Within the Drakensberg Mountain clade (B), we observed in situ diversification. Specimens from the southcentral Drakensberg Mountains (Dargle Forest, Injasuti, Karkloof, and Impendle) represent a new undescribed lineage Potamonautes sp. nov. 1. The second clade from the northern Drakensberg, representing P. clarus, was sister to a central Drakensberg Mountain clade that comprised P. depressus that was in turn sister to P. baziya from the Eastern Cape Province. The application of species delimitation methods generally overestimated the number of species. The biogeographic analyses indicated that the Eastern Cape Province is the most likely ancestral range area. Ecological niche modelling of representative species in clades A (Cape Fold Mountains) and B (Drakensberg Mountains) demonstrated that temperature and rainfall were the major abiotic drivers that differentiated the two clades. Our data favours the mountain gradient speciation hypothesis.
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