alpha-Crystallin B Chain

α - 晶体蛋白 B 链
  • 文章类型: Journal Article
    在荷兰家庭中,新发现的αB-晶状体蛋白(αB-晶状体蛋白)的致病变异体(A527G)与先天性白内障和年轻发作的扩张型心肌病(DCM)有关。尽管疾病机制尚不清楚。从三名携带A527G变体的有症状患者中产生了四个人诱导多能干细胞(hiPSC)克隆,和一个健康的先证者。使用无整合的仙台病毒多能性载体重新编程外周血单核细胞(PBMC)。建立的hiPSCs克隆表现出规则的ESC样形态,多能性标记的表达,和正常的核型分析。这些hiPSC细胞系可以促进未来的研究,以了解伴侣功能及其在DCM疾病进展中的作用。
    A newly identified pathogenic variant (A527G) in alpha B-crystallin (αB-crystallin) has been linked to congenital cataract and young-onset dilated cardiomyopathy (DCM) within a Dutch family, although the disease mechanism remains unclear. Four human induced pluripotent stem cell (hiPSC) clones were generated from three symptomatic patients carrying the A527G variant, and one healthy proband. Peripheral blood mononuclear cells (PBMCs) were reprogrammed using integration-free Sendai viral pluripotency vectors. The established hiPSCs clones exhibited regular ESC-like morphology, expression of pluripotency markers, and normal karyotyping. These hiPSC lines can facilitate future studies to understand the chaperone function and its role in DCM disease progression.
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  • 文章类型: Journal Article
    淀粉样蛋白斑在阿尔茨海默病(AD)患者脑中的沉积是该疾病的标志。AD斑块主要由β-淀粉样蛋白(Aβ)肽组成,但可以含有其他因素,例如脂质,蛋白聚糖,和监护人。到目前为止,目前尚不清楚细胞环境如何调节原纤维多态性以及原纤维结构的差异如何影响细胞活力。小的热休克蛋白(sHSP)α-B-晶体蛋白(αBC)在AD患者的大脑中含量丰富,并与Aβ淀粉样蛋白斑块共定位。使用固态NMR光谱,我们表明,在sHSP存在下,Aβ40原纤维种子结构不会复制。αBC阻止致密原纤维结构的产生并导致具有动态N末端的新多晶型物的形成。我们发现,Aβ40原纤维核心中的N末端模糊涂层和C末端残基的稳定性会影响原纤维的化学和热力学稳定性,并影响其播种能力。我们相信我们的结果能更好地理解sHSP,比如αBC,是蜂窝环境的一部分,可以影响与淀粉样蛋白疾病中细胞变性相关的原纤维结构。
    Deposition of amyloid plaques in the brains of Alzheimer\'s disease (AD) patients is a hallmark of the disease. AD plaques consist primarily of the beta-amyloid (Aβ) peptide but can contain other factors such as lipids, proteoglycans, and chaperones. So far, it is unclear how the cellular environment modulates fibril polymorphism and how differences in fibril structure affect cell viability. The small heat-shock protein (sHSP) alpha-B-Crystallin (αBC) is abundant in brains of AD patients, and colocalizes with Aβ amyloid plaques. Using solid-state NMR spectroscopy, we show that the Aβ40 fibril seed structure is not replicated in the presence of the sHSP. αBC prevents the generation of a compact fibril structure and leads to the formation of a new polymorph with a dynamic N-terminus. We find that the N-terminal fuzzy coat and the stability of the C-terminal residues in the Aβ40 fibril core affect the chemical and thermodynamic stability of the fibrils and influence their seeding capacity. We believe that our results yield a better understanding of how sHSP, such as αBC, that are part of the cellular environment, can affect fibril structures related to cell degeneration in amyloid diseases.
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  • 文章类型: Journal Article
    目的:胶质瘤相关癫痫影响相当比例的胶质瘤患者,导致疾病进展和生存率下降。然而,缺乏可靠的术前癫痫发作预测因子阻碍了有效的手术计划.这项研究调查了αB晶状体蛋白(CRYAB)血浆水平作为神经胶质瘤患者癫痫发作的预测生物标志物的潜力。
    方法:从75名参与者中获取血浆样本,包括21例术前癫痫的胶质瘤患者,14例术前无癫痫的胶质瘤患者,和21名年龄和性别匹配的对照受试者。此外,11例特发性癫痫患者和8例难治性癫痫患者作为阳性疾病对照组。该研究利用ELISA准确定量所有参与者的血浆样品中CRYAB的循环水平。
    结果:分析显示,患有术前癫痫和特发性癫痫的神经胶质瘤患者血浆CRYAB水平显着降低。接收器工作特性(ROC)曲线分析显示出令人印象深刻的性能,表明整个患者队列的AUC为0.863(95%CI,0.810-0.916)。此外,血浆CRYAB水平表现出强大的诊断能力,AUC为0.9135,灵敏度为100.0%,特异性为73.68%,有效区分有术前癫痫和无癫痫的胶质瘤患者。决策曲线分析(DCA)强调了血浆CRYAB水平在预测神经胶质瘤术前癫痫中的临床相关性。
    结论:研究结果表明,降低的CRYAB水平可能有助于预测神经胶质瘤患者的癫痫发作。尽管未来的大规模前瞻性研究是有必要的.
    OBJECTIVE: Glioma-associated epilepsy affects a significant proportion of glioma patients, contributing to disease progression and diminished survival rates. However, the lack of a reliable preoperative seizure predictor hampers effective surgical planning. This study investigates the potential of Alpha B crystallin protein (CRYAB) plasma levels as a predictive biomarker for epilepsy seizures in glioma patients.
    METHODS: Plasma samples were obtained from 75 participants, including 21 glioma patients with pre-operative epilepsy, 14 glioma patients without pre-operative epilepsy, and 21 age- and sex-matched control subjects. Additionally, 11 idiopathic epilepsy patients and 8 intractable epilepsy patients served as positive disease control groups. The study utilized ELISA to accurately quantify the circulating levels of CRYAB in the plasma samples of all participants.
    RESULTS: The analysis revealed a significant reduction in plasma CRYAB levels in glioma patients with pre-operative epilepsy and idiopathic epilepsy. The receiver operating characteristic (ROC) curve analysis displayed an impressive performance, indicating an AUC of 0.863 (95% CI, 0.810-0.916) across the entire patient cohort. Furthermore, plasma CRYAB levels exhibited a robust diagnostic capability, with an AUC of 0.9135, a sensitivity of 100.0%, and a specificity of 73.68%, effectively distinguishing glioma patients with preoperative epilepsy from those without epilepsy. The Decision Curve Analysis (DCA) underscored the clinical relevance of plasma CRYAB levels in predicting pre-operative epilepsy in glioma.
    CONCLUSIONS: The findings imply that the reduced levels of CRYAB may assist in prediction of seizure occurrence in glioma patients, although future large-scale prospective studies are warranted.
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  • 文章类型: Journal Article
    背景:骨形成和体内平衡在很大程度上依赖于人骨髓干细胞(BMSCs)的成骨分化。因此,揭示BMSCs成骨分化的潜在机制将为骨质疏松症提供新的候选治疗靶点。
    方法:通过分析ALP活性和成骨标志物的表达水平来检测BMSCs的成骨分化。应用细胞Fe和ROS水平以及细胞活力来评估BMSCs的铁凋亡。qRT-PCR,西方印迹,并利用免疫共沉淀试验研究其分子机制。
    结果:骨质疏松症患者血浆中CRYAB的mRNA水平降低。CRYAB的过表达增加了包括OCN在内的成骨标志物的表达,OPN,RUNX2和COLI,也增强了BMSCs的ALP活性,相反,敲除CRYAB有相反的效果。IP-MS技术鉴定了与CRYAB相互作用的蛋白质,并进一步发现CRYAB与铁蛋白重链1(FTH1)相互作用并通过蛋白酶体机制维持FTH1的稳定性。机械上,我们揭示了CRYAB以依赖于乳酸化的方式调节FTH1蛋白的稳定性.敲除FTH1抑制BMSCs成骨分化,并增加了细胞铁和ROS的水平,并最终促进了铁性凋亡。拯救实验表明,CRYAB通过调节FTH1抑制BMSCs的铁凋亡,促进BMSCs的成骨分化。骨质疏松症患者血浆中FTH1的mRNA水平降低。
    结论:CRYAB的下调促进FTH1降解并增加细胞Fe和ROS水平,最终改善了BMSCs的铁凋亡,减少了BMSCs的成骨分化。
    Bone formation and homeostasis are greatly dependent on the osteogenic differentiation of human bone marrow stem cells (BMSCs). Therefore, revealing the mechanisms underlying osteogenic differentiation of BMSCs will provide new candidate therapeutic targets for osteoporosis.
    The osteogenic differentiation of BMSCs was measured by analyzing ALP activity and expression levels of osteogenic markers. Cellular Fe and ROS levels and cell viability were applied to evaluate the ferroptosis of BMSCs. qRT-PCR, Western blotting, and co-immunoprecipitation assays were harnessed to study the molecular mechanism.
    The mRNA level of CRYAB was decreased in the plasma of osteoporosis patients. Overexpression of CRYAB increased the expression of osteogenic markers including OCN, OPN, RUNX2, and COLI, and also augmented the ALP activity in BMSCs, on the contrary, knockdown of CRYAB had opposite effects. IP-MS technology identified CRYAB-interacted proteins and further found that CRYAB interacted with ferritin heavy chain 1 (FTH1) and maintained the stability of FTH1 via the proteasome mechanism. Mechanically, we unraveled that CRYAB regulated FTH1 protein stability in a lactylation-dependent manner. Knockdown of FTH1 suppressed the osteogenic differentiation of BMSCs, and increased the cellular Fe and ROS levels, and eventually promoted ferroptosis. Rescue experiments revealed that CRYAB suppressed ferroptosis and promoted osteogenic differentiation of BMSCs via regulating FTH1. The mRNA level of FTH1 was decreased in the plasma of osteoporosis patients.
    Downregulation of CRYAB boosted FTH1 degradation and increased cellular Fe and ROS levels, and finally improved the ferroptosis and lessened the osteogenic differentiation of BMSCs.
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  • 文章类型: Journal Article
    阿尔茨海默病(AD)是一个全球性的医学挑战。研究表明,由β-淀粉样蛋白(Aβ)病理性聚集引起的神经毒性是导致AD的重要因素。因此,抑制Aβ的病理性聚集是治疗AD的关键。我们小组在前期制备的重组人HspB5-ACD结构域蛋白(AHspB5)已被证明具有抗淀粉样蛋白聚集作用,但是它无法穿透生物膜限制了它的发展。在这项研究中,我们制备了TAT和AHspB5的重组融合蛋白(T-AHspB5)。体外实验表明,T-AHspB5抑制Aβ1-42原原纤维的形成,具有穿透血脑屏障的能力;在细胞实验中,T-AHspB5可预防Aβ1-42诱导的氧化应激损伤,凋亡,神经元细胞的炎症反应,其作用机制与小胶质细胞活化和线粒体依赖性凋亡途径有关。在动物实验中,T-AHspB5改善APP/PS1小鼠记忆和认知功能障碍,抑制AD病理变化。总之,本文旨在揭示T-AHspB5对Aβ1-42病理性聚集的干预机制和生物学效应,为T-AHspB5的未来发展和应用奠定基础。
    Alzheimer\'s disease (AD) is a global medical challenge. Studies have shown that neurotoxicity caused by pathological aggregation of β-amyloid (Aβ) is an important factor leading to AD. Therefore, inhibiting the pathological aggregation of Aβ is the key to treating AD. The recombinant human HspB5-ACD structural domain protein (AHspB5) prepared by our group in the previous period has been shown to have anti-amyloid aggregation effects, but its inability to penetrate biological membranes has limited its development. In this study, we prepared a recombinant fusion protein (T-AHspB5) of TAT and AHspB5. In vitro experiments showed that T-AHspB5 inhibited the formation of Aβ1-42 protofibrils and had the ability to penetrate the blood-brain barrier; in cellular experiments, T-AHspB5 prevented Aβ1-42-induced oxidative stress damage, apoptosis, and inflammatory responses in neuronal cells, and its mechanism of action was related to microglia activation and mitochondria-dependent apoptotic pathway. In animal experiments, T-AHspB5 improved memory and cognitive dysfunction and inhibited pathological changes of AD in APP/PS1 mice. In conclusion, this paper is expected to reveal the intervention mechanism and biological effect of T-AHspB5 on pathological aggregation of Aβ1-42, provide a new pathway for the treatment of AD, and lay the foundation for the future development and application of T-AHspB5.
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    文章类型: English Abstract
    目的:探讨CRYAB与前列腺癌(PCa)预后的关系及可能机制。
    方法:使用R软件进行生物信息学分析,包括差异基因表达和临床相关分析,接收机工作特性(ROC)曲线和Kaplan-Meier(KM)曲线生成。使用RT-qPCR检测基因表达,使用蛋白质印迹验证蛋白质表达。扩散,凋亡,用CCK8、TUNEL、Transwell迁移,和入侵检测。
    结果:根据TCGA和GEO数据库,与正常组织相比,PCa组织中CRYABmRNA表达下调(P<0.05),与RWPE1细胞相比,PCa细胞中CRYABmRNA和蛋白表达下调(P<0.05)。细胞功能实验表明,上调CRYAB能够抑制细胞增殖,入侵,和前列腺癌细胞的迁移,促进细胞凋亡(P<0.05),并且在CRYAB上调的细胞系中上调CDH1表达同时下调CDH2表达。此外,CRYABmRNA表达与Gleason评分相关(P<0.01)。ROC曲线下面积为0.914,KM曲线显示CRYAB对无进展生存期(P=0.008)和疾病特异性生存期(P=0.032)具有预后价值。
    结论:CRYAB在PCa组织中下调,与PCa细胞的抗肿瘤功能有关。它可能通过调节上皮-间质转化分子影响前列腺癌细胞的转移能力。CRYABmRNA在PCa中具有重要的诊断和预后价值。
    OBJECTIVE: To explore the relationship between CRYAB and the prognosis of prostate cancer (PCa) as well as the potential mechanism.
    METHODS: Bioinformatics analysis was performed using R software, including differential gene expression and clinical correlation analysis, receiver operating characteristic (ROC) curve and Kaplan-Meier (KM) curve generation. Gene expression was detected using RT-qPCR, and protein expression was validated using Western Blot. The proliferation, apoptosis, and metastatic ability of PCa cells were detected using CCK8, TUNEL, Transwell migration, and invasion assays.
    RESULTS: According to the TCGA and GEO databases, CRYAB mRNA expression was down-regulated in PCa tissue compared with normal tissue (P< 0.05), and CRYAB mRNA and protein were down-regulated in PCa cells compared with RWPE1 cells (P< 0.05). Cell function experiments showed that up-regulated CRYAB could inhibit the proliferation, invasion, and migration of prostate cancer cells, promote apoptosis (P< 0.05), and up-regulate CDH1 expression while down-regulating CDH2 expression in the CRYAB-upregulated cell line. In addition, CRYAB mRNA expression was correlated with Gleason score (P< 0.01). The area under the ROC curve was 0.914, the KM curve showed that CRYAB had prognostic value for progression-free survival (P = 0.008) and disease-specific survival (P = 0.032).
    CONCLUSIONS: CRYAB is down-regulated in PCa tissue and is associated with the anti- tumor function of PCa cells. It may affect the metastatic ability of prostate cancer cells by regulating epithelial-mesenchymal transition molecules. CRYAB mRNA has important diagnostic and prognostic value in PCa.
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  • 文章类型: Journal Article
    迄今为止,已经在人类α-晶体蛋白的一级结构中鉴定出几种致病突变,经常涉及用不同的氨基酸取代精氨酸。这些突变可导致白内障和肌病的发生。最近,在人αB-Crystallin蛋白的功能性α-Crystallin结构域(ACD)中已经报道了一个重要的白内障相关突变,其中精氨酸107(R107)被亮氨酸取代。在这项研究中,我们研究了结构,陪伴功能,稳定性,低聚,和使用多种不同技术的p.R107L人αB-晶体蛋白的淀粉样特性。我们的结果表明,p.R107L突变可以引起次级突变,第三级,和四元结构的αB-晶体蛋白。这种白内障基因突变导致形成比野生型蛋白质更大的蛋白质寡聚体,并降低了突变伴侣的化学和热稳定性。荧光和显微镜评估均表明,该突变显着改变了人αB-Crystallin的淀粉样特性。此外,突变蛋白表明体外伴侣活性减弱。分子动力学(MD)模拟证实了实验结果,并表明p.R107L突变可以改变人αB-Crystallin二聚体的正确构象。总之,我们的结果表明,p.R107L突变可以促进较大寡聚体的形成,降低人αB-晶体蛋白的稳定性和伴侣活性,这些变化,反过来,可以在白内障疾病的发展中起关键作用。
    To date, several pathogenic mutations have been identified in the primary structure of human α-Crystallin, frequently involving the substitution of arginine with a different amino acid. These mutations can lead to the incidence of cataracts and myopathy. Recently, an important cataract-associated mutation has been reported in the functional α-Crystallin domain (ACD) of human αB-Crystallin protein, where arginine 107 (R107) is replaced by a leucine. In this study, we investigated the structure, chaperone function, stability, oligomerization, and amyloidogenic properties of the p.R107L human αB-Crystallin using a number of different techniques. Our results suggest that the p.R107L mutation can cause significant changes in the secondary, tertiary, and quaternary structures of αB-Crystallin. This cataractogenic mutation led to the formation of protein oligomers with larger sizes than the wild-type protein and reduced the chemical and thermal stability of the mutant chaperone. Both fluorescence and microscopic assessments indicated that this mutation significantly altered the amyloidogenic properties of human αB-Crystallin. Furthermore, the mutant protein indicated an attenuated in vitro chaperone activity. The molecular dynamics (MD) simulation confirmed the experimental results and indicated that p.R107L mutation could alter the proper conformation of human αB-Crystallin dimers. In summary, our results indicated that the p.R107L mutation could promote the formation of larger oligomers, diminish the stability and chaperone activity of human αB-Crystallin, and these changes, in turn, can play a crucial role in the development of cataract disorder.
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  • 文章类型: Journal Article
    αB-Crystallin(αB-Cry)是一种小型热休克蛋白,以其保护作用而闻名。具有适应性结构,可通过寡聚动力学响应环境变化。Cu(II)离子对于细胞过程至关重要,但过量与白内障和神经变性等疾病有关。这项研究调查了最佳和有害的Cu(II)浓度如何影响αB-Cry低聚物及其伴侣活性,在钾调节的离子强度环境中。技术包括等温滴定量热法,差示扫描量热法,荧光光谱法,电感耦合等离子体原子发射光谱,循环伏安法,动态光散射,圆二色性,采用MTT法,并通过计算方法进行补充。结果表明,钾离子影响αB-Cry的结构,促进Cu(II)在多个位点的结合和清除能力,并抑制离子氧化还原反应。低浓度的Cu(II),通过寡聚界面的修饰,诱导表面电荷和疏水性的调节,导致伴侣活动增加。亚单位动力学被调节,保持稳定的接口,从而抑制进一步聚集并允许在应激后功能性回复为低聚物。高Cu(II)破坏电荷/疏水性平衡,通过亚基-亚基相互作用将相当大的寡聚体缝合在一起,抑制低聚物解离,降低陪护效率。这项研究提供了有关Cu(II)和钾离子如何影响αB-Cry的见解,提高我们对Cu(II)相关疾病的认识。
    αB-Crystallin (αB-Cry) is a small heat shock protein known for its protective role, with an adaptable structure that responds to environmental changes through oligomeric dynamics. Cu(II) ions are crucial for cellular processes but excessive amounts are linked to diseases like cataracts and neurodegeneration. This study investigated how optimal and detrimental Cu(II) concentrations affect αB-Cry oligomers and their chaperone activity, within the potassium-regulated ionic-strength environment. Techniques including isothermal titration calorimetry, differential scanning calorimetry, fluorescence spectroscopy, inductively coupled plasma atomic emission spectroscopy, cyclic voltammetry, dynamic light scattering, circular dichroism, and MTT assay were employed and complemented by computational methods. Results showed that potassium ions affected αB-Cry\'s structure, promoting Cu(II) binding at multiple sites and scavenging ability, and inhibiting ion redox reactions. Low concentrations of Cu(II), through modifications of oligomeric interfaces, induce regulation of surface charge and hydrophobicity, resulting in an increase in chaperone activity. Subunit dynamics were regulated, maintaining stable interfaces, thereby inhibiting further aggregation and allowing the functional reversion to oligomers after stress. High Cu(II) disrupted charge/hydrophobicity balance, sewing sizable oligomers together through subunit-subunit interactions, suppressing oligomer dissociation, and reducing chaperone efficiency. This study offers insights into how Cu(II) and potassium ions influence αB-Cry, advancing our understanding of Cu(II)-related diseases.
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  • 文章类型: Journal Article
    αB-晶状体蛋白,小热休克蛋白(sHSP)家族的成员,在不同的组织中表达,包括眼睛,大脑,肌肉,和心脏。该蛋白质在维持眼晶状体透明度中起着至关重要的作用,并表现出保持酶伴侣和抗凋亡活性。因此,该蛋白基因突变引起的结构和功能变化可能导致白内障和心肌病等疾病的发展。最近,用色氨酸取代精氨酸123(p。已报道人αB-晶状体蛋白中的R123W突变)引发心肌病。在这项研究中,人αB-晶状体蛋白在大肠杆菌中表达(E.大肠杆菌),和错义突变p.R123W使用定点诱变产生。通过阴离子交换色谱纯化后,使用广泛的光谱和显微镜方法研究和比较了两种蛋白质的结构和功能特性。p.R123W突变诱导了继发性的显著改变,第三级,和人αB-晶状体蛋白的四级结构。与野生型蛋白质相比,这种致病性突变导致增加的β-折叠结构和具有更大尺寸的蛋白质寡聚体的形成。突变蛋白还表现出降低的伴侣活性和较低的热稳定性。原子力显微镜(AFM)和透射电子显微镜(TEM)表明,p.R123W突变蛋白更容易形成淀粉样蛋白聚集体。在p.R123W突变蛋白中观察到的结构和功能变化,随着聚集倾向的增加,可能会影响其与心肌中靶蛋白的适当功能相互作用,如钙调磷酸酶。我们的结果为p.R123W突变蛋白在肥厚型心肌病(HCM)发生中的致病干预提供了解释。
    αB-crystallin, a member of the small heat shock protein (sHSP) family, is expressed in diverse tissues, including the eyes, brain, muscles, and heart. This protein plays a crucial role in maintaining eye lens transparency and exhibits holdase chaperone and anti-apoptotic activities. Therefore, structural and functional changes caused by genetic mutations in this protein may contribute to the development of disorders like cataract and cardiomyopathy. Recently, the substitution of arginine 123 with tryptophan (p.R123W mutation) in human αB-crystallin has been reported to trigger cardiomyopathy. In this study, human αB-crystallin was expressed in Escherichia coli (E. coli), and the missense mutation p.R123W was created using site-directed mutagenesis. Following purification via anion exchange chromatography, the structural and functional properties of both proteins were investigated and compared using a wide range of spectroscopic and microscopic methods. The p.R123W mutation induced significant alterations in the secondary, tertiary, and quaternary structures of human αB-crystallin. This pathogenic mutation resulted in an increased β-sheet structure and formation of protein oligomers with larger sizes compared to the wild-type protein. The mutant protein also exhibited reduced chaperone activity and lower thermal stability. Atomic force microscopy (AFM) and transmission electron microscopy (TEM) demonstrated that the p.R123W mutant protein is more prone to forming amyloid aggregates. The structural and functional changes observed in the p.R123W mutant protein, along with its increased propensity for aggregation, could impact its proper functional interaction with the target proteins in the cardiac muscle, such as calcineurin. Our results provide an explanation for the pathogenic intervention of p.R123W mutant protein in the occurrence of hypertrophic cardiomyopathy (HCM).
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  • 文章类型: Journal Article
    我们探索了胶质母细胞瘤中单细胞分化数据的特征,并建立了基于CRYAB的预后标志物,以预测胶质母细胞瘤患者的预后。CRYAB的异常表达与多种肿瘤的侵袭行为有关。包括胶质母细胞瘤.然而,CRYAB在胶质母细胞瘤中的具体作用和机制尚不清楚。
    我们评估了来自TCGA和GEO数据库的RNA-seq和微阵列数据,结合来自GEO的神经胶质瘤患者的scRNA-seq数据。利用SeuratR包,我们在scRNA-seq数据中发现了不同的生存相关基因簇.通过单因素Cox分析发现了预后关键基因,并利用LASSO和逐步回归算法建立了预后模型。此外,我们研究了这些基因在免疫微环境中的预测潜力及其在免疫治疗中的适用性.最后,体外实验证实了高风险基因CRYAB的功能意义。
    通过分析ScRNA-seq数据,我们确定了代表7种细胞类型的28个细胞簇。经过降维和聚类分析,我们根据分化轨迹获得了少突胶质细胞谱系内的四个亚群.使用CRYAB作为终末期亚群的标记基因,我们发现其表达与不良预后相关。体外实验表明,敲除U87和LN229细胞中的CRYAB降低了细胞活力,扩散,和侵入性。
    基于CRYAB的风险模型有望准确预测胶质母细胞瘤。全面研究胶质母细胞瘤中CRYAB的具体机制将有助于了解其对免疫治疗的反应。靶向CRYAB基因可能对胶质母细胞瘤患者有益。
    We explored the characteristics of single-cell differentiation data in glioblastoma and established prognostic markers based on CRYAB to predict the prognosis of glioblastoma patients. Aberrant expression of CRYAB is associated with invasive behavior in various tumors, including glioblastoma. However, the specific role and mechanisms of CRYAB in glioblastoma are still unclear.
    We assessed RNA-seq and microarray data from TCGA and GEO databases, combined with scRNA-seq data on glioma patients from GEO. Utilizing the Seurat R package, we identified distinct survival-related gene clusters in the scRNA-seq data. Prognostic pivotal genes were discovered through single-factor Cox analysis, and a prognostic model was established using LASSO and stepwise regression algorithms. Moreover, we investigated the predictive potential of these genes in the immune microenvironment and their applicability in immunotherapy. Finally, in vitro experiments confirmed the functional significance of the high-risk gene CRYAB.
    By analyzing the ScRNA-seq data, we identified 28 cell clusters representing seven cell types. After dimensionality reduction and clustering analysis, we obtained four subpopulations within the oligodendrocyte lineage based on their differentiation trajectory. Using CRYAB as a marker gene for the terminal-stage subpopulation, we found that its expression was associated with poor prognosis. In vitro experiments demonstrated that knocking out CRYAB in U87 and LN229 cells reduced cell viability, proliferation, and invasiveness.
    The risk model based on CRYAB holds promise in accurately predicting glioblastoma. A comprehensive study of the specific mechanisms of CRYAB in glioblastoma would contribute to understanding its response to immunotherapy. Targeting the CRYAB gene may be beneficial for glioblastoma patients.
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