Tricarboxylic acid cycle

三羧酸循环
  • 文章类型: Journal Article
    探讨线粒体钙Ca2+([Ca2+]mt)和胞浆Ca2+([Ca2+]cyt)在调节肝脏线粒体脂肪氧化中的作用,我们研究了肝脏特异性线粒体钙单向转运蛋白敲除(MCUKO)小鼠模型,其[Ca2]mt降低,[Ca2]cyt含量增加。尽管[Ca2+]mt下降,肝MCU的缺失增加了异柠檬酸脱氢酶通量的速率,α-酮戊二酸脱氢酶通量,和琥珀酸脱氢酶在体内的通量。MCUKO肝片中[14C16]棕榈酸酯氧化和肝内脂解的比率增加,导致肝三酰甘油含量降低。这些作用通过激活CAMKII来概括,并通过CAMKII敲低来消除,证明CAMKII的[Ca2]cyt激活可能是MCU缺失促进肝脏线粒体氧化增加的主要机制。一起,这些数据表明,肝线粒体氧化可以从[Ca2+]mt分离,并揭示了[Ca2+]cyt在调节肝脂肪线粒体氧化中的关键作用,肝内脂解,糖异生,和脂质积累。
    To examine the roles of mitochondrial calcium Ca2+ ([Ca2+]mt) and cytosolic Ca2+ ([Ca2+]cyt) in the regulation of hepatic mitochondrial fat oxidation, we studied a liver-specific mitochondrial calcium uniporter knockout (MCU KO) mouse model with reduced [Ca2+]mt and increased [Ca2+]cyt content. Despite decreased [Ca2+]mt, deletion of hepatic MCU increased rates of isocitrate dehydrogenase flux, α-ketoglutarate dehydrogenase flux, and succinate dehydrogenase flux in vivo. Rates of [14C16]palmitate oxidation and intrahepatic lipolysis were increased in MCU KO liver slices, which led to decreased hepatic triacylglycerol content. These effects were recapitulated with activation of CAMKII and abrogated with CAMKII knockdown, demonstrating that [Ca2+]cyt activation of CAMKII may be the primary mechanism by which MCU deletion promotes increased hepatic mitochondrial oxidation. Together, these data demonstrate that hepatic mitochondrial oxidation can be dissociated from [Ca2+]mt and reveal a key role for [Ca2+]cyt in the regulation of hepatic fat mitochondrial oxidation, intrahepatic lipolysis, gluconeogenesis, and lipid accumulation.
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  • 文章类型: Journal Article
    肌肉干细胞(MuSCs)能够在运动或损伤后促进肌肉生长和再生,但是人们对新陈代谢如何控制它们的再生潜力知之甚少。我们描述了初级代谢变化可以决定小鼠MuSC命运的决定。我们发现,在MuSC分化过程中,谷氨酰胺向三羧酸(TCA)循环的回补减少,并且与线粒体谷氨酸脱氨酶GLUD1的表达减少一致。在增殖的MuSCs中缺失Glud1导致早熟分化和融合,结合体外和体内自我更新的丧失。机械上,删除Glud1会导致线粒体谷氨酸积累并抑制苹果酸-天冬氨酸穿梭(MAS)。将减少NADH的等效物转运到线粒体中的缺陷引起的区室特异性NAD/NADH比率发生了变化。MAS活性恢复或直接改变NAD+/NADH比率使肌生成正常化。总之,GLUD1防止在增殖的MuSC中有害的线粒体谷氨酸积累和MAS的失活。因此,它充当MuSC分化的隔室特异性代谢制动。
    Muscle stem cells (MuSCs) enable muscle growth and regeneration after exercise or injury, but how metabolism controls their regenerative potential is poorly understood. We describe that primary metabolic changes can determine murine MuSC fate decisions. We found that glutamine anaplerosis into the tricarboxylic acid (TCA) cycle decreases during MuSC differentiation and coincides with decreased expression of the mitochondrial glutamate deaminase GLUD1. Deletion of Glud1 in proliferating MuSCs resulted in precocious differentiation and fusion, combined with loss of self-renewal in vitro and in vivo. Mechanistically, deleting Glud1 caused mitochondrial glutamate accumulation and inhibited the malate-aspartate shuttle (MAS). The resulting defect in transporting NADH-reducing equivalents into the mitochondria induced compartment-specific NAD+/NADH ratio shifts. MAS activity restoration or directly altering NAD+/NADH ratios normalized myogenesis. In conclusion, GLUD1 prevents deleterious mitochondrial glutamate accumulation and inactivation of the MAS in proliferating MuSCs. It thereby acts as a compartment-specific metabolic brake on MuSC differentiation.
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  • 文章类型: Journal Article
    尿素循环损伤及其与肥胖和炎症的关系仍然难以捉摸,部分原因是经典尿素循环缺陷的戏剧性临床表现。我们产生了肝细胞特异性精氨酸酶2缺失(Arg2LKO)的小鼠,并显示出轻度的代偿性尿素循环缺陷。稳定同位素示踪和呼吸测定显示肝细胞尿素和TCA循环通量缺陷,线粒体氧化代谢受损,尽管成年早期能量和葡萄糖稳态正常,但谷氨酰胺的再生。然而在成年中期,饮食和饮食诱导的肥胖Arg2LKO小鼠会出现过度的葡萄糖和脂质紊乱,通过替换TCA循环氧化底物烟酰胺腺嘌呤二核苷酸是可逆的。此外,基于血清的尿素标志,TCA循环,线粒体排列紊乱可提前近十年预测106,606例患者发生纤维炎症性肝病。数据揭示了通过ARG2进行分层尿素-TCA循环控制以驱动氧化代谢。此外,该回路中的扰动可能将尿素循环损害与纤维炎症性肝病有因果关系。
    Urea cycle impairment and its relationship to obesity and inflammation remained elusive, partly due to the dramatic clinical presentation of classical urea cycle defects. We generated mice with hepatocyte-specific arginase 2 deletion (Arg2LKO) and revealed a mild compensated urea cycle defect. Stable isotope tracing and respirometry revealed hepatocyte urea and TCA cycle flux defects, impaired mitochondrial oxidative metabolism, and glutamine anaplerosis despite normal energy and glucose homeostasis during early adulthood. Yet during middle adulthood, chow- and diet-induced obese Arg2LKO mice develop exaggerated glucose and lipid derangements, which are reversible by replacing the TCA cycle oxidative substrate nicotinamide adenine dinucleotide. Moreover, serum-based hallmarks of urea, TCA cycle, and mitochondrial derangements predict incident fibroinflammatory liver disease in 106,606 patients nearly a decade in advance. The data reveal hierarchical urea-TCA cycle control via ARG2 to drive oxidative metabolism. Moreover, perturbations in this circuit may causally link urea cycle compromise to fibroinflammatory liver disease.
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  • 文章类型: Journal Article
    FurciferaSogatellafurcifera(Horváth)(同翅目:Delphacidae)是一种白背飞虱(WBPH),会在水稻中引起“料斗燃烧”,导致严重的产量损失。γ-氨基丁酸(GABA)是一种众所周知的神经递质,通过与特定受体结合来抑制昆虫的神经传递。在这项研究中,我们研究了GABA在调节水稻对WBPH的抗性中的潜在作用,并评估了可能的防御机制。实验是在温室中的盆中进行的,由四组组成:对照组,GABA处理,WBPH感染,和用GABA处理的WBPH感染。在GABA的各种测试浓度中,将15mMGABA作为在水中的单一处理施加。在WBPH侵染前一周给予治疗。结果表明,15mMGABA处理强烈增加了WBPH抗性。基于平板的测定表明,直接施用15mMGABA会增加水稻植株中WBPH的死亡率并增加损害恢复率。我们发现GABA处理增加了抗氧化酶的活化,降低了活性氧含量和丙二醛含量,并降低了WBPH造成的损坏率。有趣的是,用WBPH感染的补充GABA的植物表现出增加的苯丙氨酸解氨酶和发病相关(PR)基因表达水平。在WBPH胁迫期间,GABA诱导了脱落酸(ABA)和水杨酸(SA)的积累,并增强了气孔的闭合并减少了叶片血管,从而降低了水分传导。此外,我们发现GABA应用于植物诱导茉莉酸(JA)生物合成基因(LOX,AOS,AOC,和OPR)和褪黑激素生物合成相关基因(TDC,T5H,ASMT,和SNAT)。我们的研究表明,GABA通过调节抗氧化防御系统来增加对WBPH侵染的抗性,TCA循环调节,植物激素信号,和PR基因调控。
    The Sogatella furcifera (Horváth) (Homoptera: Delphacidae) is a white-backed planthopper (WBPH) that causes \"hopper burn\" in rice, resulting in severe yield loss. Gamma-aminobutyric acid (GABA) is a well-known neurotransmitter that inhibits neurotransmission in insects by binding to specific receptors. In this study, we investigated the potential role of GABA in modulating rice resistance to WBPH and evaluated possible defense mechanisms. The experiment was conducted in green house in pots consist of four groups: control, GABA-treated, WBPH-infested, and WBPH-infested treated with GABA. Among the various tested concentration of GABA, 15 mM GABA was applied as a single treatment in water. The treatment was administered one week before WBPH infestation. The results revealed that 15 mM GABA treatment strongly increased WBPH resistance. A plate-based assay indicated that direct application of 15 mM GABA increased the mortality rate of WBPH and increased the damage recovery rate in rice plants. We found that GABA treatment increased the activation of antioxidant enzymes and reduced the reactive oxygen species content and malondialdehyde contents, and reduced the damage rate caused by WBPH. Interestingly, GABA-supplemented plants infested with WBPH exhibited increased phenylalanine ammonia-lyase and pathogenesis-related (PR) genes expression levels. GABA induced the accumulation of abscisic acid (ABA) and salicylic acid (SA) and enhanced the stomata closure and reduced leaf vessels to reduce water conductance during WBPH stress. Furthermore, we found that GABA application to the plant induced the expression of Jasmonic acid (JA) biosynthesis genes (LOX, AOS, AOC, and OPR) and melatonin biosynthesis-related genes (TDC, T5H, ASMT, and SNAT). Our study suggested that GABA increases resistance against WBPH infestation by regulating antioxidant defense system, TCA cycle regulation, phytohormonal signaling, and PR gene regulation.
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  • 文章类型: Journal Article
    丙烯酰胺(AAM),广泛用于各种工业应用的化合物,据报道,在活生物体的多个组织中诱导毒性作用。尽管它广泛使用,AAM对卵巢功能的影响以及这些影响的潜在机制仍然知之甚少。这里,我们使用21天的胃内AAM给药建立了AAM暴露的小鼠毒理学模型。AAM暴露降低了卵巢系数和卵泡发育受损。进一步的研究表明,AAM会触发细胞凋亡并干扰卵巢组织中的三羧酸循环,从而影响线粒体电子传递功能。此外,AAM暴露降低了卵母细胞和胚胎发育潜能,机械上与心周蛋白和磷酸化AuroraA簇失败相关,导致减数分裂纺锤体组装缺陷。总的来说,这些结果表明,AAM暴露可能导致细胞凋亡,葡萄糖代谢紊乱,卵巢组织线粒体功能障碍,最终影响卵母细胞质量。
    Acrylamide (AAM), a compound extensively utilized in various industrial applications, has been reported to induce toxic effects across multiple tissues in living organisms. Despite its widespread use, the impact of AAM on ovarian function and the mechanisms underlying these effects remain poorly understood. Here, we established an AAM-exposed mouse toxicological model using 21 days of intragastric AAM administration. AAM exposure decreased ovarian coefficient and impaired follicle development. Further investigations revealed AAM would trigger apoptosis and disturb tricarboxylic acid cycle in ovarian tissue, thus affecting mitochondrial electron transport function. Moreover, AAM exposure decreased oocyte and embryo development potential, mechanically associated with pericentrin and phosphorylated Aurora A cluster failure, leading to meiotic spindle assembly defects. Collectively, these results suggest that AAM exposure may lead to apoptosis, glucose metabolic disorders, and mitochondrial dysfunction in ovary tissue, ultimately compromising oocyte quality.
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  • 文章类型: Journal Article
    丙酮酸脱氢酶复合物(PDC)因其大小和结构以及生理和病理重要性而引人注目。它的典型位置在线粒体基质中,其中它通过将糖酵解衍生的丙酮酸脱羧为乙酰辅酶A来启动三羧酸(TCA)循环。不太受欢迎的是它在帮助塑造表观遗传景观方面的作用,从哺乳动物生命的早期发育到细胞核中的“月光”能力,对人类健康和寿命产生重大影响。PDC对表观基因组的两个关键修饰因子的影响,乙酰化和乳酸化,是这个简短审查的重点。
    The pyruvate dehydrogenase complex (PDC) is remarkable for its size and structure as well as for its physiological and pathological importance. Its canonical location is in the mitochondrial matrix, where it primes the tricarboxylic acid (TCA) cycle by decarboxylating glycolytically-derived pyruvate to acetyl-CoA. Less well appreciated is its role in helping to shape the epigenetic landscape, from early development throughout mammalian life by its ability to \"moonlight\" in the nucleus, with major repercussions for human healthspan and lifespan. The PDC\'s influence on two crucial modifiers of the epigenome, acetylation and lactylation, is the focus of this brief review.
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  • 文章类型: Journal Article
    铁凋亡是一种非凋亡性细胞死亡,其特征是由涉及铁的自由基反应促进的磷脂过氧化引起的。研究人员已经确定了许多由促进铁凋亡的基因编码的蛋白质因子。谷胱甘肽过氧化物酶4(GPX4)是保护磷脂免于过氧化并以谷胱甘肽依赖性方式抑制铁凋亡的关键酶。因此,参与半胱氨酸和/或谷胱甘肽代谢的基因失调与铁死亡密切相关。从细胞动力学的角度来看,活跃增殖的细胞比静止的细胞更容易发生铁死亡,这表明氧参与代谢过程中产生的自由基物种是脂质过氧化的原因。在这里,我们讨论了在能量代谢过程中主要发生的铁死亡的初始事件,与半胱氨酸缺乏有关。因此,线粒体中的三羧酸循环与呼吸链的失调是这里的主要主题,这表明线粒体可能是自由基电子和游离铁的来源。因为不仅仅是碳水化合物,还有氨基酸,尤其是谷氨酸,是中枢代谢的主要底物,处理从氨基衍生的氮也有助于脂质过氧化,是本讨论的主题。
    Ferroptosis is a type of nonapoptotic cell death that is characteristically caused by phospholipid peroxidation promoted by radical reactions involving iron. Researchers have identified many of the protein factors that are encoded by genes that promote ferroptosis. Glutathione peroxidase 4 (GPX4) is a key enzyme that protects phospholipids from peroxidation and suppresses ferroptosis in a glutathione-dependent manner. Thus, the dysregulation of genes involved in cysteine and/or glutathione metabolism is closely associated with ferroptosis. From the perspective of cell dynamics, actively proliferating cells are more prone to ferroptosis than quiescent cells, which suggests that radical species generated during oxygen-involved metabolism are responsible for lipid peroxidation. Herein, we discuss the initial events involved in ferroptosis that dominantly occur in the process of energy metabolism, in association with cysteine deficiency. Accordingly, dysregulation of the tricarboxylic acid cycle coupled with the respiratory chain in mitochondria are the main subjects here, and this suggests that mitochondria are the likely source of both radical electrons and free iron. Since not only carbohydrates, but also amino acids, especially glutamate, are major substrates for central metabolism, dealing with nitrogen derived from amino groups also contributes to lipid peroxidation and is a subject of this discussion.
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  • 文章类型: Journal Article
    豆科植物通过特殊根瘤中的根瘤菌进行共生固氮。生化过程是能源密集型的,并且消耗巨大的碳源以产生足够的还原力。为了保持共生,苹果酸由豆类结核提供给类细菌,作为其主要的碳和能源,以换取铵离子和含氮化合物。为了维持细菌的碳供应,结节细胞经历碳代谢的急剧重组。这里,使用独立于数据的采集蛋白质组学对根瘤和未接种根之间的线粒体蛋白质组进行了全面的定量比较,揭示了根瘤线粒体蛋白的调节和响应碳重新分配的途径。从文献中证实了我们的发现,我们认为结节优选将胞质磷酸烯醇丙酮酸分配给苹果酸合成代替丙酮酸合成,结节线粒体更喜欢苹果酸而不是丙酮酸作为产生ATP的NADH的主要来源。此外,呼吸链相关蛋白的差异调节表明结节线粒体可以增强复合物I和IV合成ATP的效率.这项研究强调了大豆结节线粒体适应的定量蛋白质组学观点。
    Legumes perform symbiotic nitrogen fixation through rhizobial bacteroids housed in specialised root nodules. The biochemical process is energy-intensive and consumes a huge carbon source to generate sufficient reducing power. To maintain the symbiosis, malate is supplied by legume nodules to bacteroids as their major carbon and energy source in return for ammonium ions and nitrogenous compounds. To sustain the carbon supply to bacteroids, nodule cells undergo drastic reorganisation of carbon metabolism. Here, a comprehensive quantitative comparison of the mitochondrial proteomes between root nodules and uninoculated roots was performed using data-independent acquisition proteomics, revealing the modulations in nodule mitochondrial proteins and pathways in response to carbon reallocation. Corroborated our findings with that from the literature, we believe nodules preferably allocate cytosolic phosphoenolpyruvates towards malate synthesis in lieu of pyruvate synthesis, and nodule mitochondria prefer malate over pyruvate as the primary source of NADH for ATP production. Moreover, the differential regulation of respiratory chain-associated proteins suggests that nodule mitochondria could enhance the efficiencies of complexes I and IV for ATP synthesis. This study highlighted a quantitative proteomic view of the mitochondrial adaptation in soybean nodules.
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  • 文章类型: Letter
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  • 文章类型: Journal Article
    结论:γ-氨基丁酸减轻了与抗氧化剂代谢增强以及柠檬酸和苹果酸的积累和运输相关的酸铝对根的毒性。铝(Al)毒性已成为酸性土壤中作物生长和发育的主要限制因素,并且由于持续的工业污染而在世界范围内进一步加剧。本研究旨在研究GABA引发对减轻根生长方面的酸铝毒性的影响,抗氧化防御,柠檬酸盐和苹果酸盐代谢,以及在酸性条件下根中广泛的代谢产物重塑。37天大的爬行斑草(Agrostisstolonifera)植物被用作测试材料。将有或没有0.5mMGABA引发3天的根在标准营养液中培养15天作为对照,或将其置于含有5mMAlCl3·6H2O的营养液中15天作为酸Al胁迫处理。对根系进行采样以确定根系特征,生理生化参数,和代谢组学。GABA引发显著减轻酸铝诱导的根系生长抑制和氧化损伤,尽管它促进了根中铝的积累。代谢组学分析表明,GABA引发显著增加有机酸的积累,氨基酸,碳水化合物,酸铝胁迫下根中的其他代谢产物。此外,在酸铝胁迫下,GABA引发还显着上调了与苹果酸和柠檬酸在根中积累和运输相关的关键基因。GABA调节的代谢产物参与三羧酸循环,GABA分流器,抗氧化防御系统,和脂质代谢,在活性氧清除中发挥了积极作用,能量转换,渗透调节,和根中的铝离子螯合。
    CONCLUSIONS: γ-Aminobutyric acid alleviates acid-aluminum toxicity to roots associated with enhanced antioxidant metabolism as well as accumulation and transportation of citric and malic acids. Aluminum (Al) toxicity has become the main limiting factor for crop growth and development in acidic soils and is further being aggravated worldwide due to continuous industrial pollution. The current study was designed to examine effects of GABA priming on alleviating acid-Al toxicity in terms of root growth, antioxidant defense, citrate and malate metabolisms, and extensive metabolites remodeling in roots under acidic conditions. Thirty-seven-day-old creeping bentgrass (Agrostis stolonifera) plants were used as test materials. Roots priming with or without 0.5 mM GABA for 3 days were cultivated in standard nutrient solution for 15 days as control or subjected to nutrient solution containing 5 mM AlCl3·6H2O for 15 days as acid-Al stress treatment. Roots were sampled for determinations of root characteristics, physiological and biochemical parameters, and metabolomics. GABA priming significantly alleviated acid-Al-induced root growth inhibition and oxidative damage, despite it promoted the accumulation of Al in roots. Analysis of metabolomics showed that GABA priming significantly increased accumulations of organic acids, amino acids, carbohydrates, and other metabolites in roots under acid-Al stress. In addition, GABA priming also significantly up-regulated key genes related to accumulation and transportation of malic and citric acids in roots under acid-Al stress. GABA-regulated metabolites participated in tricarboxylic acid cycle, GABA shunt, antioxidant defense system, and lipid metabolism, which played positive roles in reactive oxygen species scavenging, energy conversion, osmotic adjustment, and Al ion chelation in roots.
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