METHODS: Sampling was performed at three sites in the Tapajós River mouth, Pará State, Brazil, and an aliquot of blood was collected from each turtle by post-occipital dorsal vein puncture. The aliquots were used for the determination of hematological parameters and for the study of hemoparasites in the blood samples.
RESULTS: A total of 37 turtles were sampled: 21 Podocnemis expansa, three P. sextuberculata, nine P. unifilis, and four P. erythrocephala. Parasitological analyses showed inclusions in erythrocytes compatible with Haemogregarina sp., representing an overall prevalence of parasitized animals of 64.8% with an average of 94,789 parasites/ml of blood. In this study, the evolutionary forms of Haemogregarina spp. from trophozoites, pre-meronts, meronts, and mature and immature gamonts were observed in three species of freshwater turtle species, and one morphotype of the parasite with high similarity to Haemogregarina podocnemis has been observed.
CONCLUSIONS: Despite recent research on freshwater turtles, this study provides new information on the intensity of blood parasite infection and hematological parameters of free-living animals, highlighting the need for studies on infected and uninfected animals from the same population.

The Amazonian clearwater igapós are poorly studied floodplain ecosystems that are mainly covered by forests and are undergoing massive threats due to changes in land use and climate. Their hydrochemical characteristics and edaphic conditions fall between those of the eutrophic várzea floodplains on whitewater rivers and those of the oligotrophic igapós on blackwater rivers. Previous studies have indicated the management potential of timber species in the highly dynamic várzea floodplains due to the fast tree growth and high forest productivity. Timber resource management, however, is not recommended for the blackwater ecosystem because of its slow dynamics and high vulnerability to disturbances. For clearwater igapós, information on the potential for sustainable management of timber resources is lacking. In this study, we modeled the growth in diameter, height, and volume to derive species-specific minimum logging diameters (MLD) and felling cycles (FC) for eight merchantable species in the clearwater igapós of the Branco and Tapajós rivers in the northern and southern Amazon Basin, respectively. Diameter growth was modeled by analyzing the tree rings that are annually formed in the Amazonian floodplains as a consequence of the regular and predicable long-term flooding. Growth modeling followed the guidelines of the Growth-Oriented Logging (GOL) concept, with the adjustment of diameter growth improved by applying nonlinear mixed-effects regression. MLDs varied from 36 to 90 cm and FCs ranged from 6 to 21 years, which diverges from the standards of Brazilian logging regulations (MLD: 50 cm; FC: 25-35 years). This indicates the potential for timber resource management, which should be tested and introduced at small scales, integrated in protected areas to stepwise promote the sustainable management of these natural resources by traditional communities to increase their income and the conservation of this ecosystem.

The objective of this study was reports, through morphological and small subunit ribosomal DNA (SSU rDNA) sequencing, two novel myxobolid myxosporeans infecting Piaractus brachypomus, an economicaly important Amazonian fish popularly known as \"pirapitinga\". Of a total of 25 specimens of P. brachypomus examined 68% had the gill filament parasitized by Henneguya tapariensis n. sp. and 16% had infection of Myxobolus arapiuns n. sp. in the pyloric cecum. The morphological analysis revealed H. tapariensis n. sp. myxospores with an ellipsoid shape and caudal process larger than the length of the body. The polar capsules of same size were elongated and occupied less than half the body. Sequencing of the SSU rDNA generated a partial sequence of 1946 bp. In M. arapiuns n. sp. the myxospores had oval-shaped body and polar capsules of the same size, occupying less than half the body. Sequencing of the SSU rDNA generated a partial sequence of 1950 bp. Phylogenetic analysis revealed a cluster according to the order/family of the host, where H. tapariensis n. sp. was grouped in a subclade with Henneguya brachypomus and Henneguya piaractus and M. arapiuns grouped in a subclade with Myxobolus colossomatis, Myxobolus matosi and Myxobolus pirapitingae.

This study compared the monogeneans community in C. monoculus from the Tapajós River (state of Pará) and Jari River (state of Amapá), northern Brazil. A total of 2188 monogeneans belonging to eight taxa were collected from the gills of fish: Gussevia arilla, Gussevia longihaptor, Gussevia tucunarense, Gussevia undulata, Sciadicleithrum ergensi, Sciadicleithrum umbilicum, Sciadicleithrum uncinatum and Tucunarella cichlae. Gussevia arilla was the dominant species for C. monoculus from the Tapajós River basin, while S. umbilicum predominated among the hosts from the Jari River basin. For the two populations of C. monoculus, the prevalence, mean intensity and mean abundance of monogeneans were different and the of parasites community had a high qualitative similarity (87.5 %). The monogeneans community of C. monoculus was characterized by high species richness, with infection values varying from low to moderate. The geographic distance and differences in environmental characteristics arising from the same did not influence the richness of species of monogeneans infesting C. monoculus in the Tapajós and Jari rivers, but appear to have been determinants in the differences observed in the structure of the monogenean communities in each region.

Although the Atlantic Forest marmosets (Callithrix spp.) are among the best studied Neotropical primates, the Amazonian marmosets (Callibella humilis, Cebuella spp. and Mico spp.) are much less well-known. Even species diversity and distributions are yet to be properly determined because field data and materials currently available in scientific collections do not allow comprehensive taxonomic studies of Amazonian marmosets. From 2015 to 2018, we conducted 10 expeditions in key-areas within southern Amazonia where little or no information on marmosets was available. In one such region-the Tapajós-Jamanxim interfluve-we recorded marmosets with a distinctive pelage pigmentation pattern suggesting they could represent a new species. We tested this hypothesis using an integrative taxonomic framework that included phylogenomic data (ddRAD sequences), pelage pigmentation characters, and distribution records. We found that the marmosets of the northern Tapajós-Jamanxim interfluve have unique states in pelage pigmentation characters, form a clade (100% support) in our Bayesian and Maximum-Likelihood phylogenies, and occur in an area isolated from other taxa by rivers. The integration of these lines of evidence leads us to describe a new marmoset species in the genus Mico, named after the Munduruku Amerindians of the Tapajós-Jamanxim interfluve, southwest of Pará State, Brazil.

Specimens of the Cichla pinima are of ecological and economic importance in the Amazon region and are a good bioindicator species of Hg bioaccumulation. Adult specimens of Cichla pinima were obtained by fisheries in the Tapajós river region\'s impacted gold mining area. Tissues such as muscle, liver, skin, and gill were submitted for total mercury (THg) analysis. For hepatic bioavailability, assays were carried out in the whole liver and in the sub-cellular hepatic fraction. The weight-length relationship showed an equation of W = 2E - 06L3.3002 (R2 = 0.856) indicating an allometric growth. The mean THg values found in the muscle tissue of 676 ± 258 μg kg-1 were below the maximum limit established for human consumption, but were similar to Cichla fish from other areas impacted by Hg in the Amazon region. The trends of levels in the tissues were as follows: liver>muscle>gonads>skin>gill, with no significant differences between the gills and skin. A significant and positive correlation as rs = 0.65 was obtained between the THg contents in cytosolic fraction and the total hepatic THg (liver homogenate). However, only 7% of the THg were found and were available to the sub-cellular hepatic fraction. This profile can be an indicative of a hepatic cellular transference in fish exposed to high Hg levels in the Amazon region now that low concentrations of Hg have been found in the sub-cellular fraction. However, data of differential THg partition in the subcellular compartments should be considered, since others\' hepatic fractions can act in the Hg linkage into the cell.

The Amazon basin includes 1000s of bodies of water, that are sorted according to their color in three types: blackwater, clearwater, and whitewater, which significantly differ in terms of their physicochemical parameters. More than 3,000 species of fish live in the rivers of the Amazon, among them, the sardine, Triportheus albus, which is one of the few species that inhabit all three types of water. The purpose of our study was to analyze if the gene expression of T. albus is determined by the different types of water, that is, if the species presents phenotypic plasticity to live in blackwater, clearwater, and whitewater. Gills of T. albus were collected at well-characterized sites for each type of water. Nine cDNA libraries were constructed, three biological replicates of each condition and the RNA was sequenced (RNA-Seq) on the MiSeq® Platform (Illumina®). A total of 51.6 million of paired-end reads, and 285,456 transcripts were assembled. Considering the FDR ≤ 0.05 and fold change ≥ 2, 13,754 differentially expressed genes were detected in the three water types. Two mechanisms related to homeostasis were detected in T. albus that live in blackwater, when compared to the ones in clearwater and whitewater. The acidic blackwater is a challenging environment for many types of aquatic organisms. The first mechanism is related to the decrease in cellular permeability, highlighting the genes coding for claudin proteins, actn4, itgb3b, DSP, Gap junction protein, and Ca2+-ATPase. The second with ionic and acid-base regulation [rhcg1, slc9a6a (NHE), ATP6V0A2, Na+/K+-ATPase, slc26a4 (pedrin) and slc4a4b]. We suggest T. albus is a good species of fish for future studies involving the ionic and acid-base regulation of Amazonian species. We also concluded that, T. albus, shows well defined phenotypic plasticity for each water type in the Amazon basin.

The fish fauna of freshwater streams in the Tapajos National Forest was surveyed and a list of species is presented. The sampling was conducted from 2012 to 2013 during the dry season. Fish were collected with dip nets and seine nets in 22 streams of 1(st) to 3(rd) order. Sampling resulted in 3035 specimens belonging to 117 species, 27 families and six orders. The most abundant species were Bryconops aff. melanurus, Hemigrammus belottii, and Hemigrammus analis. Four undescribed species were recognized, one of which is known only from the area of this study. A significant dissimilarity was observed in fish species composition among drainage systems. This is the first survey of the stream ichthyofauna in the Tapajós National Forest, and it presents relevant information for future studies and decision-making in the management and conservation of fish fauna in this conservation unit.
ResumoA ictiofauna de riachos na Floresta Nacional do Tapajós foi inventariada e uma lista de espécies é apresentada. As amostragens foram realizadas de 2012 a 2013 durante o período de águas baixas. Os peixes foram coletados com redes de arrasto e peneiras em 22 riachos de 1ª a 3ª ordem. As amostragens resultaram em 3035 espécimes pertencentes a 117 espécies, 27 famílias e seis ordens. As espécies mais abundantes foram Bryconops aff. melanurus, Hemigrammus belottii and Hemigrammus analis. Quatro espécies novas foram reconhecidas, sendo uma conhecida apenas da área de estudo até o presente momento. Foi observada uma dissimilaridade significativa na composição de espécies de peixes entre os sistemas de drenagem. Esse é o primeiro inventário da ictiofauna de riachos na Floresta Nacional do Tapajós e apresenta informações relevantes para subsidiar estudos futuros e a tomada de decisões no gerenciamento da ictiofauna nessa Unidade de Conservação.

The study present evaluated the levels of mercury (Hg) and methylmercury (MeHg) in hair samples of people from Barreiras community, riverside inhabitants of the Tapajós River (Pará, Brazil), an area impacted by clandestine gold mining, as well as we analyzed the levels of Hg and Se (selenium) in nine fish species (carnivores and non-carnivorous) from the Tapajós River, which stand out as the main species consumed by riverside inhabitants, to evaluate a relationship between frequency of fish consumption and Hg concentration, and also to evaluate possible mechanisms of fish protection (or non-protection) to Hg exposure by Se. Furthermore we analyze the water quality to evaluate the environmental trophic state, fact responsible by creating conditions that can potentiate the effects of toxic mercury. Concentrations of Hg and MeHg were analyzed in hair samples of 141 volunteers in different age band. Of those, 84.40% of samples present values above the threshold for biological tolerance, which is 6.00μgg(-1) of total Hg in hair. Total Hg, in men there was a variation of 2.07-24.93μgg(-1), while for women the variation was 4.84-27.02μgg(-1). Consequently, the level of MeHg in men presented a variation of 1.49-19.57μgg(-1), with an average of 11.68μgg(-1), while with women the variation was from 3.73 to 22.35μgg(-1), with an average of 10.38μgg(-1). In fish species, Hg concentrations in carnivorous species had an average of 0.66μgg(-1), higher than that permitted by current legislation, ranging from 0.30 to 0.98μgg(-1), while the non-carnivorous species have values below the recommended by the legislation averaging 0.09μgg(-1), ranging between 0.02 and 0.44μgg(-1). For Se in fish, show that among carnivores, the contents of Se ranged between 0.18 and 0.54μgg(-1) with a mean of 0.34μgg(-1), while for non-carnivores these values were of the order of 0.16-0.56μgg(-1), with an average of 0.32μgg(-1). In surface water quality variables at the sampling points all showed values in accordance with the range established by current legislation. In this regard, the results provided by this study, while not conclusive, are strong indicators that despite not having been shown the relationship between the concentration of mercury in hair and feeding habits along the Tapajós River basin communities showed that a plausible correlation exists between levels of mercury and selenium in fish. This fact may serve as a subsidy to research human health, because in the Amazon, there is still a lot to examine with regards to the full understanding of the Se cycle.