SAXS/WAXS

SAXS / WAXS
  • 文章类型: Journal Article
    用于结构生物学研究的生物大分子的制备是复杂且耗时的过程。目标是生产高度集中的,高纯度产品,通常用工具运往大型设施,以准备样品进行结晶试验或在同步加速器和低温中心进行测量。本文的目的是提供指导并讨论运输生物大分子样品的一般考虑因素。还提供了有关特定实验类型的运输样品的详细信息,包括基于解决方案和低温的技术。这些指南的目的是希望在样品制备上投入的时间和精力不会由于运输物流而损失。
    Preparation of biomacromolecules for structural biology studies is a complex and time-consuming process. The goal is to produce a highly concentrated, highly pure product that is often shipped to large facilities with tools to prepare the samples for crystallization trials or for measurements at synchrotrons and cryoEM centers. The aim of this article is to provide guidance and to discuss general considerations for shipping biomacromolecular samples. Details are also provided about shipping samples for specific experiment types, including solution- and cryogenic-based techniques. These guidelines are provided with the hope that the time and energy invested in sample preparation is not lost due to shipping logistics.
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  • 文章类型: Journal Article
    对于肽-PEG缀合物,检查了α-环糊精(αCD)对PEG结晶的影响,YYKLVFF-PEG3k包含与PEG连接的淀粉样肽YYKLVFF,摩尔质量为3kgmol-1。值得注意的是,差示扫描量热法(DSC)和同步同步加速器小角度/广角X射线散射(SAXS/WAXS)表明αCD抑制了PEG的结晶,条件是环糊精含量足够。形成六角形中间相。αCD穿线降低了PEG的构象柔性,因此抑制了结晶。这些结果表明,添加环糊精可用于调节肽-聚合物缀合物和潜在的其它聚合物/生物分子杂化物的结晶。
    The influence of alpha-cyclodextrin (αCD) on PEG crystallization is examined for a peptide-PEG conjugate, YYKLVFF-PEG3k comprising an amyloid peptide YYKLVFF linked to PEG with molar mass 3 kg mol-1. Remarkably, differential scanning calorimetry (DSC) and simultaneous synchrotron small-angle/wide-angle X-ray scattering (SAXS/WAXS) show that crystallization of PEG is suppressed by αCD, provided that the cyclodextrin content is sufficient. A hexagonal mesophase is formed instead. The αCD threading reduces the conformational flexibility of PEG, and hence suppresses crystallization. These results show that addition of cyclodextrins can be used to tune the crystallization of peptide-polymer conjugates and potentially other polymer/biomolecular hybrids.
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  • 文章类型: Journal Article
    使用外源性肺表面活性物质(EPS)作为布地奈德(BUD)载体的临床益处,一种具有广泛抗炎作用的非卤化皮质类固醇,已经建立。使用各种实验技术(差示扫描量热法DSC,小角度和广角X射线散射SAXS/WAXS,小角度中子散射SANS,荧光光谱法,动态光散射DLS,和zeta电位),我们研究了BUD对临床使用的EPS的热力学和结构的影响,Curosurf®。我们表明,BUD促进了Curosurf®从凝胶到流体状态的相变,导致主相变温度(Tm)和焓(ΔH)降低。对于BUD<10重量%的Curosurf®质量,保持Curosurf®分散体的形态;BUD略微增加了多层囊泡(MLV)中流体层状相的重复距离d,这是由于脂质双层的增厚而产生的。双层增厚(〜0.23nm)源自SANS数据。~2mmol/L的Ca2+的存在维持了MLVs的作用和结构。Curosurf®双层侧压的变化表明,当表面活性剂脂质分子的酰基链之间的嵌入BUD含量超过约6wt%时,其位于疏水区域更深。我们的研究支持使用富含布地奈德的Curosurf®的联合疗法的概念。
    The clinical benefits of using exogenous pulmonary surfactant (EPS) as a carrier of budesonide (BUD), a non-halogenated corticosteroid with a broad anti-inflammatory effect, have been established. Using various experimental techniques (differential scanning calorimetry DSC, small- and wide- angle X-ray scattering SAXS/WAXS, small- angle neutron scattering SANS, fluorescence spectroscopy, dynamic light scattering DLS, and zeta potential), we investigated the effect of BUD on the thermodynamics and structure of the clinically used EPS, Curosurf®. We show that BUD facilitates the Curosurf® phase transition from the gel to the fluid state, resulting in a decrease in the temperature of the main phase transition (Tm) and enthalpy (ΔH). The morphology of the Curosurf® dispersion is maintained for BUD < 10 wt% of the Curosurf® mass; BUD slightly increases the repeat distance d of the fluid lamellar phase in multilamellar vesicles (MLVs) resulting from the thickening of the lipid bilayer. The bilayer thickening (~0.23 nm) was derived from SANS data. The presence of ~2 mmol/L of Ca2+ maintains the effect and structure of the MLVs. The changes in the lateral pressure of the Curosurf® bilayer revealed that the intercalated BUD between the acyl chains of the surfactant\'s lipid molecules resides deeper in the hydrophobic region when its content exceeds ~6 wt%. Our studies support the concept of a combined therapy utilising budesonide-enriched Curosurf®.
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  • 文章类型: Journal Article
    全无机铯卤化铅钙钛矿纳米晶体(NC)由于其优异的光学和电子性能而备受关注,但是由于其快速形成过程,潜在的生长机制仍然难以捉摸。这里,我们报告了在定制反应器中实际合成条件下Cs4PbBr6NC生长的原位实时研究。通过基于同步加速器的小角度X射线散射技术,我们发现Cs4PbBr6NCs的形成是通过三个步骤完成的:快速成核过程伴随着自聚焦生长,随后扩散限制的奥斯特瓦尔德成熟,NCs在高温下自组装成面心立方(fcc)超晶格并终止生长。同时收集的广角X射线散射信号进一步证实了三步生长模型。超晶格形成的影响也被阐明,这提高了最终NC的均匀性。
    All-inorganic cesium lead halide perovskite nanocrystals (NCs) have received much attention due to their outstanding optical and electronic properties, but the underlying growth mechanism remains elusive due to their rapid formation process. Here, we report an in situ real-time study of the growth of Cs4PbBr6 NCs under practical synthesis conditions in a custom-made reactor. Through the synchrotron-based small-angle X-ray scattering technique, we find that the formation of Cs4PbBr6 NCs is accomplished in three steps: the fast nucleation process accompanied by self-focusing growth, the subsequent diffusion-limited Ostwald ripening, and the self-assembly of NCs into the face-centered cubic (fcc) superlattices at high temperature and the termination of growth. The simultaneously collected wide-angle X-ray scattering signals further corroborate the three-step growth model. The influence of superlattice formation is also elucidated, which improves the uniformity of the final NCs.
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  • 文章类型: Journal Article
    智能药物递送系统被认为是使用现有非处方药改善癌症治疗的最重要技术之一。然而,金属材料总是伴随着新陈代谢问题,而化疗会在人类中产生一些副作用。碳基材料表现出优异的特征,例如生物亲和力和生物降解性。在这里,据报道,中空介孔碳纳米颗粒(HMC)是抗癌小药物分子的有效纳米载体。近红外(NIR)源,可以穿透大多数器官,通过非侵入性途径诱导热效应。NIR辐射不仅提供热疗,而且与温度敏感的涂覆响应聚合物壳相容。模板法用于合成尺寸为200±50nm的HMC,在各种条件下,以获得用于肝癌治疗的适当尺寸和中空结构。将额外的pH/热双响应聚(N-异丙基丙烯酰胺)(PNIPAM)壳进一步涂覆到HMC上,以产生多个壳,这些壳可以触发PNIPAM@HMC的溶胀运动,如通过小角度X射线散射(SAXS)所证实的。NIR结果表明,HMC和PNIPAM@HMC的ΔT为8.7和14.2°C,分别。使用SasView模拟分析的SAXS光谱证明了合成HMC的多壳结构和PNIPAM@HMC的释放机制。基于SAXS的模型仿真,聚合物溶胀率的不同表明,在37°C和42°C时,核收缩(229.7至134.2µ)和壳膨胀(324.3至514.3µ),分别。此外,一阶,Higuchi,Korsmeyer-Peppas,和Weibull数学模型用于验证药物释放动力学,R2值最高的模型被认为最适合进一步应用。本文首先介绍了SAXS对PNIPAM@HMCs释放动力学和相关机制的研究。这种现象表明NIR诱导的PNIPAM@HMC是通过释放阿霉素治疗癌症的有效策略。
    Intelligent drug-delivery systems are considered one of the most important techniques for improving cancer treatment using existing over-the-counter medicines. However, metallic materials are always accompanied by metabolism problems, whereas chemotherapy produces several side effects in humans. Carbon-based materials exhibit exceptional features such as bio-affinity and bio-degradability. Herein, hollow mesoporous carbon nanoparticles (HMCs) are reported as effective nanocarriers of anti-cancer small drug molecules. Near IR (NIR) sources, which can penetrate most organs, induce thermal effects via non-invasive pathways. NIR radiation not only provides thermal therapy but also is compatible with temperature-sensitive coated responsive polymer shells. The template method was used to synthesize HMCs with size 200 ± 50 nm, under various conditions, to obtain suitably sized and hollow structures for liver-cancer treatment. Additional pH/thermal-bi-responsive poly(N-isopropylacrylamide) (PNIPAM) shells were further coated onto the HMCs to produce multiple shells that could trigger swelling motions in PNIPAM@HMCs, as confirmed via small-angle X-ray scattering (SAXS). NIR results demonstrated an extreme increase to the ∆T of 8.7 and 14.2 °C for HMC and PNIPAM@HMCs, respectively. The SAXS spectra analyzed using SasView simulations demonstrated the multi-shell structures of synthesized HMCs and the release mechanism of PNIPAM@HMCs. Based on the model simulation of SAXS, the different rates of polymer swelling indicated the core shrinkage (229.7 to 134.2 Å) and shell expansion (324.3 to 514.3 Å) at 37 °C and 42 °C, respectively. In addition, the first-order, Higuchi, Korsmeyer-Peppas, and Weibull mathematical models were used to verify the drug-release kinetics, and the model with the highest R2 value was considered most suitable for further application. This paper presents the first SAXS study on PNIPAM@HMCs release kinetics and related mechanisms. This phenomenon indicates NIR-induced PNIPAM@HMCs as an effective strategy for cancer treatment via doxorubicin release.
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  • 文章类型: Journal Article
    X射线是具有10μm至10nm波长的高能电磁辐射的穿透形式。类似于可见光,X射线为研究物体的原子和元素信息提供了强大的工具。建立了基于X射线的不同表征方法,如X射线衍射,小角和广角X射线散射,和基于X射线的光谱学,探索各种材料的结构和元素信息,包括低维纳米材料。本文综述了X射线相关表征方法在MXenes中的最新进展,一个新的二维纳米材料家族。这些方法提供了有关纳米材料的关键信息,覆盖合成,元素组成,以及MXene板材及其复合材料的组装。此外,在展望部分提出了新的表征方法作为未来的研究方向,以增强对MXene表面和化学性质的理解。这篇综述有望为表征方法的选择提供指导,并有助于对MXene研究中的实验数据进行精确解释。
    X-rays are a penetrating form of high-energy electromagnetic radiation with wavelengths ranging from 10 pm to 10 nm. Similar to visible light, X-rays provide a powerful tool to study the atoms and elemental information of objects. Different characterization methods based on X-rays are established, such as X-ray diffraction, small- and wide-angle X-ray scattering, and X-ray-based spectroscopies, to explore the structural and elemental information of varied materials including low-dimensional nanomaterials. This review summarizes the recent progress of using X-ray related characterization methods in MXenes, a new family of 2D nanomaterials. These methods provide key information on the nanomaterials, covering synthesis, elemental composition, and the assembly of MXene sheets and their composites. Additionally, new characterization methods are proposed as future research directions in the outlook section to enhance understanding of MXene surface and chemical properties. This review is expected to provide a guideline for characterization method selection and aid in precise interpretation of the experimental data in MXene research.
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  • 文章类型: Journal Article
    我们通过X射线散射实验对水溶液中生物大分子的高分辨率结构表征进行了可行性研究,该实验是在一定范围的散射矢量(q)上测得的,该散射矢量比以前用于此类系统的范围宽大约两个数量级。具有这种扩展的q范围的散射数据可以恢复底层的实空间原子对分布函数,这有助于结构确定。我们使用几种类型的环糊精(CD)作为模型系统证明了该方法用于生物大分子的潜力。我们成功地确定了水溶液中CD中糖苷单元的倾斜角相对于这些分子的结晶形式中的值的偏差。从标准的小角度散射测量中无法获得这样的结构细节水平。我们的结果要求进一步探索生物大分子的超广角X射线散射测量。
    We communicate a feasibility study for high-resolution structural characterization of biomacromolecules in aqueous solution from X-ray scattering experiments measured over a range of scattering vectors (q) that is approximately two orders of magnitude wider than used previously for such systems. Scattering data with such an extended q-range enables the recovery of the underlying real-space atomic pair distribution function, which facilitates structure determination. We demonstrate the potential of this method for biomacromolecules using several types of cyclodextrins (CD) as model systems. We successfully identified deviations of the tilting angles for the glycosidic units in CDs in aqueous solutions relative to their values in the crystalline forms of these molecules. Such level of structural detail is inaccessible from standard small angle scattering measurements. Our results call for further exploration of ultra-wide-angle X-ray scattering measurements for biomacromolecules.
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  • 文章类型: Journal Article
    最近的分子动力学模拟,通过溶液态X射线散射实验进行实验验证,已经发现κ-角叉菜胶链含有螺旋二级结构,类似于在固态中发现的,即使在水溶液中。此外,在将离子添加到单链后,模拟没有发现任何构象转变发生的证据。这些发现挑战了长期以来的假设,即角叉菜胶系统中所谓的无序到有序的转变涉及单分子的“螺旋到螺旋的转变”。在这里,报告了在0.1MNaI溶液中使用成对的κ-角叉菜胶链进行的进一步分子动力学模拟的结果,并使用最先进的解决方案状态WAXS实验进行了实验验证。从最初分离的链中可以形成双螺旋,导致作者提出“两个单螺旋到稳定的双螺旋”来描述无序到有序转变过程中发生的分子事件。
    Recent molecular dynamics simulations, verified experimentally by solution-state x-ray scattering experiments, have found that κ-carrageenan chains contain helical secondary structure, akin to that found in the solid-state, even in aqueous solution. Furthermore, upon the addition of ions to single chains the simulations found no evidence that any conformational transitions take place. These findings challenge the long-held assumption that the so-called disorder-to-order transition in carrageenan systems involves a uni-molecular \'coil-to-helix transition\'. Herein, the results of further molecular dynamics simulations undertaken using pairs of κ-carrageenan chains in 0.1 M NaI solutions are reported, and are validated experimentally using state-of-the-art solution-state WAXS experiments. From initially separated chains double-helices are shown to form, leading the authors to propose \'two single helices-to-stabilized double-helix\' as a description of the molecular events taking place during the disorder-to-order transition.
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  • 文章类型: Journal Article
    κ-角叉菜胶的溶液状态结构通常被描述为“无规卷曲”,表示缺乏定义的二级结构元素。从这个起点开始,在将特定离子引入到诸如“线圈到螺旋的过渡”之类的解决方案之后,对旋光检测到的变化的分配似乎是明确的,因此,这种重要的生物聚合物的胶凝行为的规范描述诞生了。然而,κ-角叉菜胶作为随机卷曲存在于溶液中的概念,没有二级结构,以前在文献中多次受到质疑,特别是通过分子建模和核磁共振群落。遗憾的是,迄今为止,人们很少希望解决这些在很大程度上被忽视的研究,或者考虑它们对所谓的“线圈到螺旋过渡”性质的影响。尽管有相反的证据,随机线圈范式盛行。这里,来自同步加速器支持的溶液态X射线散射实验的新数据,结合最先进的原子分子动力学模拟,用于表明κ-角叉菜胶的溶液状态结构实际上保留了固态中存在的许多螺旋基序,从光纤衍射数据推断。此外,没有证据表明单链在添加离子时经历任何单分子构象转变。这些发现再次挑战了κ-角叉菜胶在溶液状态下作为“随机线圈”存在的范式,从而质疑长期以来的假设,即单分子的“线圈到螺旋的跃迁”先于螺旋的二聚化。
    The solution state structure of κ-carrageenan is typically described as a \'random coil\', to indicate a lack of defined secondary structure elements. From this starting point the assignment of an optical-rotation-detected change that follows the introduction of particular ions to such solutions as a \'coil-to-helix transition\' seems unambiguous, and thus the canonical description of this important biopolymer\'s gelling behaviour was born. However, the notion that κ-carrageenan exists in solution as a random coil, devoid of secondary structure, has been questioned a number of times previously in the literature, particularly by the molecular modelling and NMR communities. Regrettably, there has been little desire to-date to address these largely overlooked studies or consider their implications for the nature of the so-called \'coil-to-helix transition\'. Despite evidence to the contrary, the random-coil-paradigm has prevailed. Here, new data from synchrotron-enabled solution-state x-ray scattering experiments, combined with state-of-the-art atomistic molecular dynamics simulations, are used to show that the solution-state structure of κ-carrageenan in fact retains many of the helical motifs present in the solid-state, as inferred from fibre diffraction data. Furthermore, no evidence is found to suggest that single chains undergo any uni-molecular conformational transition upon the addition of ions. These findings once again challenge the paradigm that κ-carrageenan exists as a \'random coil\' in the solution state, and thereby question the long held assumption that a uni-molecular \'coil-to-helix transition\' precedes the dimerization of helices.
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  • 文章类型: Journal Article
    微孔圆饼状(直径:900±100nm)MIL-125(Ti)载体,中心金属(Ti)具有生物亲和力,具有作为药物释放平台的巨大潜力,已在本研究中合成。药物递送系统(DDS)的热和pH响应性是药物释放的最重要参数,可以通过聚合物包衣技术提供。在从头合成过程中,将PluronicF127(F127)和壳聚糖(CH)单体插入MIL-125(Ti)载体的晶格中,随后加载阿霉素(DOX)。结果显示,当载体到达酸性环境时,响应于温度和pH,MIL-125(Ti)载体的原始尺寸的粒度变化(范围在30%和50%之间)。药物释放曲线已通过自行设计装置完成,它通过UV-Vis光谱提供DOX量的实时释放。动力学分析用于评估一阶R2值,Higuchi,Korsmeyer-Peppas,和Weibull拟合方程,其中Weibull拟合表示最好的R2。观察到在酸性状态(pH=5.4)下释放的DOX增加了59.3%,表明CH-MIL-125(Ti)载体具有温度和pH响应性。此外,在25-42°C范围内温度升高导致的晶格爆炸导致F127-MIL-125(Ti)增加了30.8-38.3%。通过对聚合物涂层(F127-MIL-125(Ti))后MIL-125(Ti)基DDS在不同温度下的微观结构的模拟SAXS/WAXS研究提供了可能的晶格爆炸机理。因此,响应性Ti-MOF在癌症治疗应用中具有很高的潜力。
    Microporous round cake-like (diameter: 900 ± 100 nm) MIL-125(Ti) carrier with a central metal (Ti) exhibiting bio-affinity and possessing a great potential to be used as drug release platform, has been synthesized in the present study. The thermal and pH responsiveness of drug delivery systems (DDS) are the most important parameters for drug release and can be provided through polymer coating techniques. The Pluronic F127 (F127) and chitosan (CH) monomers were inserted into the crystal lattice of MIL-125(Ti) carrier during the de novo synthesis process, which were subsequently loaded with doxorubicin (DOX). The results reveal particle size changes (ranged between 30 and 50 %) from the original size of the MIL-125(Ti) carrier in response to temperature and pH when the carrier reaches acid environment. The drug release profiles have been completed through self-design device, which provides for the real-time release in the DOX amounts via UV-Vis spectra. The kinetics analysis was used to evaluate the R2 values of first order, Higuchi, Korsmeyer-peppas, and Weibull fitting equations, where the Weibull fitting indicated the best R2. An increase by 59.3 % of DOX released under the acid status (pH = 5.4) was observed, indicating that the CH-MIL-125(Ti) carrier is temperature and pH responsive. Moreover, the lattice explosion resulting from the temperature increase in the range of 25-42 °C caused an increase in F127-MIL-125(Ti) by 30.8-38.3 %. The simulated SAXS/WAXS studies for the microstructures of MIL-125(Ti) based DDS at different temperatures after polymer coating (F127-MIL-125(Ti)) provide the possible mechanism of lattice explosion. As such, the responsive Ti-MOF has a highly potential for use in the applications of cancer treatment.
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