Refinement

细化
  • 文章类型: Journal Article
    在涉及小鼠等小型啮齿动物的研究中,尿液收集可能具有挑战性,因为实际的收集方法是焦虑的,并且限制了动物的福利,同时收集的尿液体积具有很大的变异性。为了改进目前的方法,最终减少对小鼠健康的影响,我们开发了一种创新的3D打印尿液收集设备(UCD)。这种两室UCD的形状适合于经典的饲养笼中,并允许通过自发排尿从两只装在自己笼子中的小鼠中收集尿液,而不会交叉污染,同时实现潜在的社交互动。我们使用UCD研究抗体介导的慢性肾脏疾病模型中与肾功能相关的尿参数的演变。总的来说,我们在这里报告了一种节省时间和负担得起的方法,用于收集大量未污染的尿液,我们认为与其他方法相比,这种方法可以改善动物的福利。
    Urine collection can be challenging in studies involving small rodents like mice, as the actual methods of collection are anxiogenic and constrain animal welfare while having high variability in the volume of urine collected. To improve the current methods and eventually reduce the impact on the well-being of mice, we developed an innovative 3D-printed urine collection device (UCD). This two-compartment UCD is shaped to fit in classical husbandry cages and allows urine collection by spontaneous urination from two mice housed in their own cage without cross-contamination while enabling potential social interactions. We used our UCD to study the evolution of urinary parameters related to renal functions in a model of antibody-mediated chronic kidney disease. Overall, we report here a time-saving and affordable method for urine collection providing a large amount of uncontaminated urine and which we believe may improve animal welfare in comparison with other methods.
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  • 文章类型: Journal Article
    动物模型对临床前肿瘤研究和药物开发至关重要。动物实验必须按照3R原则进行替换和减少,如果可能,和完善这些程序仍然至关重要。此外,欧盟立法要求采取持续完善的方法,以及前和回顾性严重程度评估。在这项研究中,在原位诱导的胰腺癌的小鼠模型中进行了客观的数据库严重程度评估,皮下,或静脉注射Panc02细胞。体重变化等参数,遇险得分,肛周温度,老鼠鬼脸秤,挖洞,嵌套行为,在肿瘤进展过程中监测血浆中皮质酮和粪便中代谢物的浓度。将最重要的参数组合成评分,并通过相对严重度评估程序(RELSA)对照参考数据集进行映射,以获得每只动物(RELSAmax)所达到的最大严重度。该评分显示原位模型的RELSAmax显著高于皮下和静脉内模型。然而,与胰腺炎和胆管结扎等动物模型相比,胰腺癌模型显示不那么严重。基于数据的动物福利评估被证明是比较不同诱导的癌症模型的严重程度的有价值的工具。
    Animal models are crucial to preclinical oncological research and drug development. Animal experiments must be performed in accordance with the 3R principles of replacement and reduction, if possible, and refinement where these procedures remain crucial. In addition, European Union legislations demand a continuous refinement approach, as well as pro- and retrospective severity assessment. In this study, an objective databased severity assessment was performed in murine models for pancreatic cancer induced by orthotopic, subcutaneous, or intravenous injection of Panc02 cells. Parameters such as body weight change, distress score, perianal temperature, mouse grimace scale, burrowing, nesting behavior, and the concentration of corticosterone in plasma and its metabolites in feces were monitored during tumor progression. The most important parameters were combined into a score and mapped against a reference data set by the Relative Severity Assessment procedure (RELSA) to obtain the maximum achieved severity for each animal (RELSAmax). This scoring revealed a significantly higher RELSAmax for the orthotopic model than for the subcutaneous and intravenous models. However, compared to animal models such as pancreatitis and bile duct ligation, the pancreatic cancer models are shown to be less severe. Data-based animal welfare assessment proved to be a valuable tool for comparing the severity of differently induced cancer models.
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  • 文章类型: Journal Article
    光照是影响实验室啮齿动物福利的关键因素,但对它们的最佳照明条件知之甚少。众所周知,老鼠更喜欢昏暗的光线,所以明亮的光线被红色的庇护所或笼子减轻,改变光的颜色和强度。因为这两个方面都改变了,每个特征对啮齿动物偏好的贡献是未知的。Further,不知道这种偏好是否受到以前经验的影响。我们假设大鼠更喜欢较低的光强度,并且它们的偏好会受到其住房环境的影响。饲养员对大鼠随机分为四个治疗组:红200勒克斯,红色25勒克斯,清除200勒克斯,清除25勒克斯。饲养者的后代在一个可以进入每个环境的设备中进行了三次测试,并分析了他们的偏好。一般来说,大鼠更喜欢lux较低的环境,并且没有颜色偏好。然而,从清澈的老鼠,200勒克斯笼子,在第二和第三偏好测试中,首选明确的笼子,并且仅显示出对25勒克斯条件的偏好。这些结果表明,光强度,超过颜色,在设计啮齿动物住房和测试设施时应予以考虑。
    Light is a key factor influencing the welfare of laboratory rodents, but little is known about their optimal lighting condition. It i common knowledge that rats prefer dim light, so bright light is mitigated with red-tinted shelters or cages, which alter both the color and intensity of light. Because both aspects are altered, the contribution of each feature to rodent preference is unknown. Further, it is unknown if this preference is influenced by previous experience. We hypothesized that rats would prefer lower light intensity and that their preferences would be influenced by their housing environment. Breeder pairs of rats were randomly separated into four treatments groups: red 200 lux, red 25 lux, clear 200 lux, and clear 25 lux. The breeders\' offspring were tested three times in an apparatus that offered access to each environment, and their preferences were analyzed. Generally, the rats preferred the lower-lux environments and showed no color preference. However, the rats from the clear, 200 lux cages, preferred clear caging and only showed a preference for 25 lux conditions during the second and third preference tests. These results suggest that the light intensity, more than color, should be considered when designing rodent housing and testing facilities.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    背景:尽管昼夜节律对生活的各个方面都有公认的影响,对实验动物的行为测试通常忽略了与它们的自然活动模式的一致性。本研究旨在评估昼夜节律变化对结果的影响,有效性,以及大鼠不同行为测试的可靠性。
    方法:三种行为测试,明暗箱试验(LDB),评估焦虑相关行为和运动活动;掩埋颗粒测试(BPT),揭示嗅觉能力和动机问题;以及蔗糖偏好测试(SPT),研究无意义的反应,用于涵盖雄性Sprague-Dawley大鼠的多个白天依赖性行为方面。
    结果:我们的发现强调了不同的昼夜节律对运动活动的影响,探索性行为,嗅觉敏锐度,动机,和享乐主义反应。值得注意的是,焦虑行为不受白天条件的影响.此外,发现数据差异降低与受试者活跃期的行为测试相关。
    结论:这项研究表明,对所研究的几乎所有参数都有广泛的昼夜节律影响,加上活动阶段数据变异性的显著降低。强调将实验时间与大鼠的自然活动模式对齐的重要性,我们的结果表明,在动物活动阶段进行测试不仅可以提高测试灵敏度,减少压力,并提供更具代表性的数据,但也有助于伦理动物研究(3R)和提高测试相关性。这个,反过来,提高行为研究中实验结果的可靠性和有效性,促进动物福利。
    BACKGROUND: Despite the acknowledged impact of circadian rhythms on various aspects of life, behavioural tests with laboratory animals often overlook alignment with their natural activity patterns. This study aims to evaluate the influence of circadian variations on the results, validity, and reliability of different behavioural tests in rats.
    METHODS: Three behavioural tests, the Light-Dark Box Test (LDB), assessing anxiety-related behaviour and locomotor activity; the Buried Pellet Test (BPT), revealing olfactory abilities and motivation issues; and the Sucrose Preference Test (SPT), studying the anhedonic response, were employed to encompass multiple daytime-dependent behavioural aspects in male Sprague-Dawley rats.
    RESULTS: Our findings underscore distinct circadian effects on locomotor activity, exploratory behaviour, olfactory acuity, motivation, and hedonic response. Notably, anxious behaviour remained unaffected by daytime conditions. Furthermore, decreased data variance was found to be correlated with conducting behavioural tests during the subjects\' active phase.
    CONCLUSIONS: This study demonstrates extensive circadian influences on nearly all parameters investigated, coupled with a significant reduction in data variability during the active phase. Emphasising the importance of aligning experimental timing with rats\' natural activity patterns, our results suggest that conducting tests during the active phase of the animals not only refines test sensitivity , reduces stress, and provides more representative data, but also contributes to ethical animal research (3 R) and improves test relevance. This, in turn, enhances the reliability and validity of experimental outcomes in behavioural research and promotes animal welfare.
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  • 文章类型: Journal Article
    实验室小鼠通常被安置在“鞋盒”笼子里,参与自然行为的机会有限。临时进入空间和复杂性增加的环境(游戏围栏)可以改善鼠标的福利。我们小组先前的工作表明,老鼠有动机进入和使用这些环境,但尚不清楚福利的其他方面如何受到影响。女性C57BL/6J,BALB/cJ,和DBA/2J小鼠(n=21;每个品系7只小鼠)被饲养在混合品系三重奏中,并每周3次与笼子配对临时进入大型围栏。对照小鼠(n=21;每个品系7只小鼠)保持在其家庭笼中。家庭笼子行为(随着时间的推移,刻板行为的发展,更换笼子后的攻击性)和焦虑测试用于评估围栏进入如何影响福利。与我们的预测相反,我们发现,在游戏围栏小鼠中进行刻板印象的时间增加;这种差异可能与负面情绪状态有关,增加了逃离家笼的动机,或积极的应对策略。游戏围栏的使用导致了与压力相关的攻击性改善和一些焦虑措施。与C57BL/6J对照小鼠相比,C57BL/6J小鼠在笼子更换后的围栏处理中的攻击性较低,当老鼠玩围栏时,特别是C57BL/6J应变,在野外测试的中心花费了更多的时间,并且在焦虑测试期间产生了更少的粪便,支持其他研究表明应变差异在行为和应力弹性中起重要作用。
    Laboratory mice are typically housed in \"shoebox\" cages with limited opportunities to engage in natural behaviour. Temporary access to environments with increased space and complexity (playpens) may improve mouse welfare. Previous work by our group has shown that mice are motivated to access and use these environments, but it is unknown how other aspects of welfare are impacted. Female C57BL/6J, BALB/cJ, and DBA/2J mice (n = 21; 7 mice per strain) were housed in mixed-strain trios and given temporary access to a large playpen with their cage mates three times per week. Control mice (n = 21; 7 mice per strain) remained in their home cages. Home cage behaviour (development of stereotypic behaviour over time, aggression following cage-changing) and anxiety tests were used to assess how playpen access impacted welfare. Contrary to our predictions, we found increased time spent performing stereotypies in playpen mice; this difference may be related to negative emotional states, increased motivation to escape the home cage, or active coping strategies. Playpen access resulted in strain-dependent improvements in aggression and some measures of anxiety. Aggression was lower for C57BL/6J mice in the playpen treatment following cage changing than it was for C57BL/6J control mice, while playpen mice, and particularly the C57BL/6J strain, spent more time in the center of the open field test and produced fewer fecal boli during anxiety testing, supporting other research showing that strain differences play an important role in behaviour and stress resiliency.
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  • 文章类型: Journal Article
    葡萄酒的陈酿过程受各种因素的影响,包括氧气的存在,温度,和储存条件。虽然氧气对葡萄酒质量有积极和消极的影响,储存过程中的温度波动会影响其化学成分。这项研究调查了在传统酒窖条件和水下条件下,梅洛和桑乔维塞葡萄酒的老化,探索储存参数对其化学演化的影响。分析温度等参数,压力,和化学成分,这项研究揭示了葡萄酒随着时间的推移发生了微妙但显著的变化。两种葡萄酒的总酚含量都逐渐减少,花青素,非类黄酮化合物,和总二氧化硫,无论储存条件如何。初步发现表明,与传统的酒窖陈酿相比,水下陈酿葡萄酒的基本特征不会引起重大变化。这些结果有助于更深入地了解葡萄酒的陈酿过程,并强调了储存条件在保持葡萄酒质量方面的重要性。需要进一步的研究来充分阐明水下陈酿的复杂性及其对葡萄酒生产的更广泛影响。
    The aging process of wine is influenced by various factors, including the presence of oxygen, the temperature, and the storage conditions. While oxygen can have both positive and negative effects on wine quality, temperature fluctuations during storage can impact its chemical composition. This study has investigated the aging of Merlot and Sangiovese wines under traditional cellar conditions and underwater, exploring the influence of storage parameters on their chemical evolution. Analyzing parameters such as temperature, pressure, and chemical composition, the research revealed subtle but significant changes in the wines over time. Both wines showed a gradual reduction in total phenols, anthocyanins, non-flavonoid compounds, and total sulfur dioxide, irrespective of the storage conditions. Preliminary findings suggested that aging wine underwater does not induce significant alterations in its fundamental characteristics compared to traditional cellar aging. These results contribute to a deeper understanding of wine aging processes and highlight the importance of storage conditions in preserving wine quality. Further research is needed to fully elucidate the complexities of underwater aging and its broader implications for wine production.
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  • 文章类型: Journal Article
    组蛋白是许多表观遗传事件的关键,它们的复合物具有治疗和诊断的重要性。组蛋白复合物结构的确定是新药设计的基础。计算分子对接被广泛用于靶-配体复合物的预测。大,线性肽,如组蛋白的尾部区域是具有挑战性的配体对接,由于其巨大的构象灵活性,广泛的水合作用,以及与阅读器蛋白的浅结合袋的弱相互作用。因此,快速对接方法通常无法在适合药物设计的水平上产生此类肽配体的复杂结构。为了应对这一挑战,提高对接复合体的结构质量,已使用各种分子动力学(MD)方法应用了对接后精炼。然而,尚未就所需的MD改进方案达成最终共识.在本研究中,在一组有问题的组蛋白肽配体的复合物上系统地探索了MD精化策略,其对接几何结构具有相对较大的误差。比较了六种协议,它们的MD模拟参数不同。在所有情况下,应用复杂界面区域的预MD水合以避免不需要的空腔的存在。就均方根偏差与实验参考的变化而言,性能最佳的方案比对接结构的中值提高了32%。还讨论了结构因素和显式水化对对接后MD改进性能的影响,以帮助它们在未来的方法和应用中的实施。
    Histones are keys to many epigenetic events and their complexes have therapeutic and diagnostic importance. The determination of the structures of histone complexes is fundamental in the design of new drugs. Computational molecular docking is widely used for the prediction of target-ligand complexes. Large, linear peptides like the tail regions of histones are challenging ligands for docking due to their large conformational flexibility, extensive hydration, and weak interactions with the shallow binding pockets of their reader proteins. Thus, fast docking methods often fail to produce complex structures of such peptide ligands at a level appropriate for drug design. To address this challenge, and improve the structural quality of the docked complexes, post-docking refinement has been applied using various molecular dynamics (MD) approaches. However, a final consensus has not been reached on the desired MD refinement protocol. In this present study, MD refinement strategies were systematically explored on a set of problematic complexes of histone peptide ligands with relatively large errors in their docked geometries. Six protocols were compared that differ in their MD simulation parameters. In all cases, pre-MD hydration of the complex interface regions was applied to avoid the unwanted presence of empty cavities. The best-performing protocol achieved a median of 32% improvement over the docked structures in terms of the change in root mean squared deviations from the experimental references. The influence of structural factors and explicit hydration on the performance of post-docking MD refinements are also discussed to help with their implementation in future methods and applications.
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  • 文章类型: Journal Article
    近年来,对小鼠活动和行为的不受干扰的家庭笼子记录受到越来越多的关注。并行,为了自动化数据收集和解释,已经开发了几种技术。由于这些不断扩展的技术,可以长期记录和保存大量数据集,提供大量有关动物健康的信息,临床状态,基线活动,以及实验干预情况下的后续偏差。这样的大数据集也可以作为科学数据的长期储备,可以根据需要重新分析和重新利用。在这次审查中,我们介绍了家庭笼子监测(HCM)数据采集产生的大数据的影响,特别是通过数字通风笼(DVC),可以通过增强细化来支持3R的应用,Reduction,甚至取代动物研究。
    Undisturbed home cage recording of mouse activity and behavior has received increasing attention in recent years. In parallel, several technologies have been developed in a bid to automate data collection and interpretation. Thanks to these expanding technologies, massive datasets can be recorded and saved in the long term, providing a wealth of information concerning animal wellbeing, clinical status, baseline activity, and subsequent deviations in case of experimental interventions. Such large datasets can also serve as a long-term reservoir of scientific data that can be reanalyzed and repurposed upon need. In this review, we present how the impact of Big Data deriving from home cage monitoring (HCM) data acquisition, particularly through Digital Ventilated Cages (DVCs), can support the application of the 3Rs by enhancing Refinement, Reduction, and even Replacement of research in animals.
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  • 文章类型: Journal Article
    背景:大鼠遥测是评估新型候选药物在早期药物发现过程中对心血管参数的潜在影响的首选方法。当需要静脉内施用药物物质时,遥测装置植入可与静脉导管和接入按钮植入组合。
    方法:大鼠(SpragueDawley或HanWistar)植入遥测装置,用于使用直接主动脉导管插入术(n=131)或经由股动脉的主动脉导管插入术(n=17)测量动脉血压。用于ECG记录的双极引线也被植入一些动物中(n=102)。在初始遥测植入后,作为单独的手术植入了股静脉导管和进入按钮(n=43)。
    结果:128只动物(86%)成功植入了遥测设备,没有任何明显的手术或手术后问题。当分别考虑两种不同的导管插入方法时,直接主动脉入路的成功率为88%,而经股动脉主动脉置入的成功率为76%.跛行是最常见的术后问题。在直接主动脉入路的情况下,手术期间的失血和尾部缺血斑块的发生率也很低。在第一信号检查之前,一些大鼠发生了导管拔出,使用直接主动脉方法测量血压的总体成功率降低到85%。观察到导管和接入按钮植入的成功率为95%。
    结论:在有和没有静脉导管和进入按钮的大鼠中植入遥测设备时,成功率很高。我们试图提供问题的解决方案,并描述可以进一步改善手术结果的程序的改进。
    BACKGROUND: Rat telemetry is the assay of choice to assess the potential effects of novel drug candidates on cardiovascular parameters during early drug discovery. Telemetry device implantation can be combined with venous catheter and access button implantation when intravenous administration of the drug substance is required.
    METHODS: Rats (Sprague Dawley or Han Wistar) were implanted with telemetry devices for arterial blood pressure measurement using either direct aortic catheterisation (n = 131) or aortic catheterisation via the femoral artery (n = 17). Bipolar leads for ECG recording were also implanted in some of the animals (n = 102). Femoral vein catheters and access buttons were implanted as a separate surgery after the initial telemetry implantation (n = 43).
    RESULTS: 128 animals (86%) were implanted successfully with telemetry devices without any notable surgical or post-surgical problems. When considering the 2 different catheterisation methods separately, the success rate of the direct aortic approach was 88% compared to 76% with the aortic placement via the femoral artery. Lameness was the most common post-surgical problem. Blood loss during surgery and ischaemic patches on the tail were also observed at a low incidence with the direct aortic approach. Catheter pull-out occurred in some rats before the first signal check reducing the overall success rate for blood pressure measurement using the direct aortic approach to 85%. A 95% success rate was observed for catheter and access button implantation.
    CONCLUSIONS: A high success rate is possible when implanting telemetry devices in rats with and without venous catheters and access buttons. We have attempted to provide solutions to problems and describe refinements to the procedure which may further improve surgical outcomes.
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