Rab small GTPase

  • 文章类型: Journal Article
    蛋白质泛素化是真核生物中最重要的翻译后修饰(PTM)之一,并参与几乎所有细胞信号通路的调节。细胞内细菌病原体嗜肺军团菌通过不同的机制易位至少26个效应子劫持宿主泛素化信号。在这些效应物中,SidC/SdcA是采用Cys-His-Asp催化三联体的新型E3泛素连接酶。SidC/SdcA对于将内质网(ER)衍生的囊泡募集到含军团菌的液泡(LCV)至关重要。然而,SidC/SdcA的泛素化靶标在很大程度上是未知的,这限制了我们对这些效应子劫持囊泡运输途径的机制的理解。这里,我们证明了多种Rab小GTP酶和目标可溶性N-乙基马来酰亚胺敏感因子附着蛋白受体(SNARE)蛋白是SidC/SdcA的真正泛素化底物。SidC/SdcA介导的突触素3和突触素4的泛素化促进了它们与囊泡-SNARE蛋白Sec22b的非常规配对,从而有助于ER衍生的囊泡与吞噬体的膜融合。此外,我们的数据表明,SidC/SdcA对Rab7的泛素化对于其与LCV膜的关联至关重要。Rab7泛素化可能损害其与下游效应Rab相互作用溶酶体蛋白(RILP)的结合,这部分解释了为什么尽管获得了Rab7,但LCV仍避免与溶酶体融合。一起来看,我们的研究揭示了SidC/SdcA促进LCV成熟的生物学机制。
    Protein ubiquitination is one of the most important posttranslational modifications (PTMs) in eukaryotes and is involved in the regulation of almost all cellular signaling pathways. The intracellular bacterial pathogen Legionella pneumophila translocates at least 26 effectors to hijack host ubiquitination signaling via distinct mechanisms. Among these effectors, SidC/SdcA are novel E3 ubiquitin ligases with the adoption of a Cys-His-Asp catalytic triad. SidC/SdcA are critical for the recruitment of endoplasmic reticulum (ER)-derived vesicles to the Legionella-containing vacuole (LCV). However, the ubiquitination targets of SidC/SdcA are largely unknown, which restricts our understanding of the mechanisms used by these effectors to hijack the vesicle trafficking pathway. Here, we demonstrated that multiple Rab small GTPases and target soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNARE) proteins are bona fide ubiquitination substrates of SidC/SdcA. SidC/SdcA-mediated ubiquitination of syntaxin 3 and syntaxin 4 promotes their unconventional pairing with the vesicle-SNARE protein Sec22b, thereby contributing to the membrane fusion of ER-derived vesicles with the phagosome. In addition, our data reveal that ubiquitination of Rab7 by SidC/SdcA is critical for its association with the LCV membrane. Rab7 ubiquitination could impair its binding with the downstream effector Rab-interacting lysosomal protein (RILP), which partially explains why LCVs avoid fusion with lysosomes despite the acquisition of Rab7. Taken together, our study reveals the biological mechanisms employed by SidC/SdcA to promote the maturation of the LCVs.
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  • 文章类型: Journal Article
    B16-F1黑色素瘤细胞经常被用作研究黑素生成的模型,但在正常黑素细胞和B16-F1细胞中,黑素体生物发生和运输通过相同机制发生的证据是不够的。在这项研究中,我们建立了敲除B16-F1细胞的黑素生成中的几个关键因素,即,酪氨酸酶(Tyr),Hps4,Rab27A,和Rab32·Rab38(Rab32/38),然后将它们的表型与相应的突变小鼠黑素细胞系的表型进行比较,即,melan-c,melan-le,melan-ash,和缺乏Rab32的melan-cht细胞,分别。结果表明,Tyr和Rab27A也是黑色素合成和外周黑素小体分布不可或缺的,分别,在B16-F1细胞中,但是Hps4或其下游目标Rab32/38对于B16-F1细胞中的Tyr运输不是必需的,表明B16-F1细胞中存在Rab32/38独立的Tyr转运机制。然后,我们对Rab小GTP酶进行了全面的敲低筛选,并鉴定了Rab10和Rab24,这是黑素细胞中以前未表征的Rabs,在Rab32/38-null条件下参与Tyr运输。我们的发现表明黑素细胞和B16-F1细胞中Tyr转运机制在Rab32/38依赖性方面存在差异,并且在使用黑色素瘤细胞作为黑素细胞模型方面存在局限性。特别是在研究内体Tyr转运机制时。
    B16-F1 melanoma cells have often been used as a model to investigate melanogenesis, but the evidence that melanosome biogenesis and transport occur by the same mechanisms in normal melanocytes and B16-F1 cells is insufficient. In this study, we established knockout B16-F1 cells for each of several key factors in melanogenesis, i.e., tyrosinase (Tyr), Hps4, Rab27A, and Rab32·Rab38 (Rab32/38), and then compared their phenotypes with the phenotypes of corresponding mutant mouse melanocyte cell lines, i.e., melan-c, melan-le, melan-ash, and Rab32-deficient melan-cht cells, respectively. The results showed that Tyr and Rab27A are also indispensable for melanin synthesis and peripheral melanosome distribution, respectively, in B16-F1 cells, but that Hps4 or its downstream targets Rab32/38 are not essential for Tyr transport in B16-F1 cells, suggesting the existence of a Rab32/38-independent Tyr transport mechanism in B16-F1 cells. We then performed comprehensive knockdown screening of Rab small GTPases and identified Rab10 and Rab24, previously uncharacterized Rabs in melanocytes, as being involved in Tyr transport under Rab32/38-null conditions. Our findings indicate a difference between the Tyr transport mechanism in melanocytes and B16-F1 cells in terms of Rab32/38-dependency and a limitation in regard to using melanoma cells as a model for melanocytes, especially when investigating the mechanism of endosomal Tyr transport.
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  • 文章类型: Journal Article
    膜极性,定义为脂质和蛋白质在质膜中的不对称分布,是多细胞组织发育的关键先决条件,如上皮和内皮。膜极性是通过将膜组分极化运输到特定膜结构域来调节的,并且需要存在膜内扩散屏障,以防止不对称分布的膜组分的混合。这种膜内扩散屏障位于这些细胞的紧密连接(TJ)处。细胞-细胞连接的形成以及膜蛋白和脂质的极化运输均受Rho和Rab家族小GTP酶的调节。在这篇评论文章中,我们将总结极化膜交通对基底膜极性的调节以及上皮细胞中膜内扩散屏障的形成的最新进展,特别关注Rho和Rab家族小GTP酶的作用。
    Membrane polarity, defined as the asymmetric distribution of lipids and proteins in the plasma membrane, is a critical prerequisite for the development of multicellular tissues, such as epithelia and endothelia. Membrane polarity is regulated by polarized trafficking of membrane components to specific membrane domains and requires the presence of intramembrane diffusion barriers that prevent the intermixing of asymmetrically distributed membrane components. This intramembrane diffusion barrier is localized at the tight junctions (TJs) in these cells. Both the formation of cell-cell junctions and the polarized traffic of membrane proteins and lipids are regulated by Rho and Rab family small GTPases. In this review article, we will summarize the recent developments in the regulation of apico-basal membrane polarity by polarized membrane traffic and the formation of the intramembrane diffusion barrier in epithelial cells with a particular focus on the role of Rho and Rab family small GTPases.
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  • 文章类型: Journal Article
    Melanin pigments are responsible for human skin and hair color, and they protect the body from harmful ultraviolet light. The black and brown melanin pigments are synthesized in specialized lysosome-related organelles called melanosomes in melanocytes. Mature melanosomes are transported within melanocytes and transferred to adjacent keratinocytes, which constitute the principal part of human skin. The melanosomes are then deposited inside the keratinocytes and darken the skin (a process called tanning). Owing to their dark color, melanosomes can be seen easily with an ordinary light microscope, and melanosome research dates back approximately 150 years; since then, biochemical studies aimed at isolating and purifying melanosomes have been conducted. Moreover, in the last two decades, hundreds of molecules involved in regulating melanosomal functions have been identified by analyses of the genes of coat-color mutant animals and patients with genetic diseases characterized by pigment abnormalities, such as hypopigmentation. In recent years, dynamic analyses by more precise microscopic observations have revealed specific functions of a variety of molecules involved in melanogenesis. This review article focuses on the latest findings with regard to the steps (or mechanisms) involved in melanosome formation and transport of mature melanosomes within epidermal melanocytes. Finally, we will touch on current topics in melanosome research, particularly on the \"melanosome transfer\" and \"post-transfer\" steps, and discuss future directions in pigment research.
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  • 文章类型: Journal Article
    角质形成细胞从黑素细胞中摄取黑色素体并将其保留在核周区域,它们形成黑色素帽。尽管这些过程对于保护核DNA免受紫外线伤害至关重要,对角质形成细胞中黑素体摄取和分解的分子基础了解甚少。对其知之甚少的主要原因之一是缺乏可用于可视化或监测已掺入角质形成细胞中的黑色素体(或含有黑体的区室)的特异性标记蛋白。在这项研究中,我们对哺乳动物Rab家族小GTP酶(Rab1-45)进行了全面的定位筛选,并成功鉴定出11种富集在已掺入角质形成细胞的黑色素体周围的Rabs.我们还通过使用最近开发的黑素小体探针(称为M-INK)作为定量评估对照和一系列Rab敲低角质形成细胞中掺入的黑素小体上蛋白质降解的方法,建立了一种新的测定法。结果显示,角质形成细胞中Rab7B(也被鉴定为Rab42)的敲除或CRISPR/Cas9介导的敲除引起黑色素体对蛋白质降解的强烈抑制。我们的发现表明Rab7B/42被募集到含有黑素小体的隔室中,并且它促进角质形成细胞中黑素小体的蛋白质降解。关键词:退化,角质形成细胞,黑素细胞,黑体,Rab小GTPase。
    Keratinocytes uptake melanosomes from melanocytes and retain them in the perinuclear region, where they form melanin caps. Although these processes are crucial to protecting nuclear DNA against ultraviolet injury, the molecular basis of melanosome uptake and decomposition in keratinocytes is poorly understood. One of the major reasons for its being poorly understood is the lack of a specific marker protein that can be used to visualize or monitor melanosomes (or melanosome-containing compartments) that have been incorporated into keratinocytes. In this study, we performed a comprehensive localization screening for mammalian Rab family small GTPases (Rab1-45) and succeeded in identifying 11 Rabs that were enriched around melanosomes that had been incorporated into keratinocytes. We also established a new assay by using a recently developed melanosome probe (called M-INK) as a means of quantitatively assessing the degradation of proteins on incorporated melanosomes in control and each of a series of Rab-knockdown keratinocytes. The results showed that knockdown or CRISPR/Cas9-mediated knockout of Rab7B (also identified as Rab42) in keratinocytes caused strong inhibition of protein degradation on melanosomes. Our findings indicated that Rab7B/42 is recruited to melanosome-containing compartments and that it promotes protein degradation on melanosomes in keratinocytes.Key words: degradation, keratinocytes, melanocytes, melanosome, Rab small GTPase.
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  • 文章类型: Journal Article
    Protein ubiquitination is one of the most prevalent posttranslational modifications; it regulates a wide range of critical cellular processes in eukaryotes. This modification occurs by covalent attachment of the ubiquitin molecule to other proteins via an isopeptide bond in reactions typically catalyzed by sequential actions of three enzymes, including ubiquitin-activating enzyme (E1), ubiquitin-conjugating enzyme (E2), and ubiquitin ligase (E3). Ubiquitination is a reversible process catalyzed by a group of proteins known as deubiquitinase (DUB), which specifically cleaves the isopeptide bond between ubiquitin and modified proteins. Recently, a novel form of ubiquitination catalyzed by the SidE family of effectors from the bacterial pathogen Legionella pneumophila was reported. These proteins ubiquitinate structurally diverse host proteins such as reticulons and ER-associated Rab small GTPases by a two-step mechanism that uses NAD as the energy source for ubiquitin activation prior to being transferred to serine residues in target proteins. This process bypasses the need for E1 and E2 enzymes. Intriguingly, ubiquitination induced by SidEs is regulated by SidJ, another L. pneumophila effector protein which reverses the modification by functioning as an unconventional DUB. Here, we summarize the experimental details of Rab small GTPases (use Rab33b as an example) ubiquitination catalyzed by SidEs (use SdeA as an example) as well as deubiquitination catalyzed by SidJ.
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  • 文章类型: Journal Article
    Historically, studies on the maturation and intracellular transport of melanosomes in melanocytes have greatly contributed to elucidating the general mechanisms of intracellular transport in many different types of mammalian cells. During melanosome maturation, melanosome cargoes including melanogenic enzymes (e.g. tyrosinase) are transported from endosomes to immature melanosomes by membrane trafficking, which must require a membrane fusion process likely regulated by SNAREs [soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptors]. In the present study, we review the literature concerning the expression and function of SNAREs (e.g. v-SNARE vesicle-associated membrane protein 7 and t-SNAREs syntaxin-3/13 and synaptosomal-associated protein-23) in melanocytes, especially in regard to the fusion process in which melanosome cargoes are finally delivered to immature melanosomes. We also describe the recent discovery of the SNARE recycling system on mature melanosomes in melanocytes. Such SNARE dynamics, especially the SNARE recycling system, on melanosomes will be useful in understanding as yet unidentified SNARE dynamics on other organelles.
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