Pyramid structure

  • 文章类型: Journal Article
    拉曼光谱已成为一种重要的单细胞分析工具,用于监测细胞水平的生化变化。然而,拉曼光谱数据,通常表现为具有高维特征的连续数据,与离散序列不同,由于缺乏离散化,限制了基于深度学习的算法在数据分析中的应用。在这里,提出了一种称为片段融合变压器的模型,它将基于其固有特性的连续光谱的离散片段化与片段内特征的提取和片段间特征的融合相结合。该模型将基于本征特征的光谱碎片与变压器集成在一起,构建片段转换器块,用于片段内的特征提取。碎片间信息通过金字塔设计结构进行组合,以改善模型的感受场并充分利用光谱特性。在锥体融合过程中,与片段内的特征提取阶段相比,频谱中最终提取特征的信息增益提高了9.24倍,信息熵提高了13倍。碎片融合变压器实现了94.5%的光谱识别精度,在细胞拉曼光谱鉴定实验的测试集上,与没有碎片和融合过程的方法相比,高出4%。与KNN等常见光谱分类模型相比,SVM,逻辑回归,CNN,片段融合变换器比表现最好的CNN模型实现了4.4%的准确度。片段融合变压器方法有可能作为连续光谱数据分析领域中离散化的一般框架,并作为分析光谱内固有信息的研究工具。
    Raman spectroscopy has become an important single-cell analysis tool for monitoring biochemical changes at the cellular level. However, Raman spectral data, typically presented as continuous data with high-dimensional characteristics, is distinct from discrete sequences, which limits the application of deep learning-based algorithms in data analysis due to the lack of discretization. Herein, a model called fragment-fusion transformer is proposed, which integrates the discrete fragmentation of continuous spectra based on their intrinsic characteristics with the extraction of intrafragment features and the fusion of interfragment features. The model integrates the intrinsic feature-based fragmentation of spectra with transformer, constructing the fragment transformer block for feature extraction within fragments. Interfragment information is combined through the pyramid design structure to improve the model\'s receptive field and fully exploit the spectral properties. During the pyramidal fusion process, the information gain of the final extracted features in the spectrum has been enhanced by a factor of 9.24 compared to the feature extraction stage within the fragment, and the information entropy has been enhanced by a factor of 13. The fragment-fusion transformer achieved a spectral recognition accuracy of 94.5%, which is 4% higher compared to the method without fragmentation and fusion processes on the test set of cell Raman spectroscopy identification experiments. In comparison to common spectral classification models such as KNN, SVM, logistic regression, and CNN, fragment-fusion transformer has achieved 4.4% higher accuracy than the best-performing CNN model. Fragment-fusion transformer method has the potential to serve as a general framework for discretization in the field of continuous spectral data analysis and as a research tool for analyzing the intrinsic information within spectra.
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  • 文章类型: Journal Article
    总挥发性碱性氮(TVB-N)和总活菌数(TVC)是肉类重要的新鲜度指标。高光谱成像与化学计量学相结合已被证明在肉类检测中是有效的。然而,化学计量学的一个挑战是缺乏普遍适用的处理组合,需要使用不同的数据集进行试错实验。本研究提出了一种端到端的深度学习模型,金字塔注意力特征融合模型(PAFFM),整合CNN,注意机制和金字塔结构。PAFFM融合原始可见光和近红外范围(VNIR)和短波近红外范围(SWIR)光谱数据,以预测鸡胸肉中的TVB-N和TVC。与CNN和化学计量学模型相比,PAFFM获得了优异的结果,而无需复杂的处理组合优化过程。可视化并解释了对PAFFM性能做出重大贡献的重要波长。本研究为光谱检测的市场应用提供了有价值的参考和技术支持,有利于相关研究和实践领域。
    Total volatile basic nitrogen (TVB-N) and total viable count (TVC) are important freshness indicators of meat. Hyperspectral imaging combined with chemometrics has been proven to be effective in meat detection. However, a challenge with chemometrics is the lack of a universally applicable processing combination, requiring trial-and-error experiments with different datasets. This study proposes an end-to-end deep learning model, pyramid attention features fusion model (PAFFM), integrating CNN, attention mechanism and pyramid structure. PAFFM fuses the raw visible and near-infrared range (VNIR) and shortwave near-infrared range (SWIR) spectral data for predicting TVB-N and TVC in chicken breasts. Compared with the CNN and chemometric models, PAFFM obtains excellent results without a complicated processing combinatorial optimization process. Important wavelengths that contributed significantly to PAFFM performance are visualized and interpreted. This study offers valuable references and technical support for the market application of spectral detection, benefiting related research and practical fields.
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  • 文章类型: Journal Article
    NH3广泛存在于环境中,与各种健康问题密切相关。此外,检测肝脏和肾脏疾病患者呼出的少量NH3为无痛早期疾病诊断提供了潜在的机会。因此,迫切需要一个方便的,快速,和高灵敏度的实时NH3监测方法。这项工作提出了一种基于金字塔硅纳米线(SiNWs)结构衬底上的嗅觉受体衍生肽(ORP)的高性能NH3传感器。首先,我们使用化学蚀刻方法成功地在硅衬底上制造了金字塔-SiNWs结构。随后,通过APTES上的氨基与ORP的羧基之间的脱水缩合反应,ORP成功地固定在金字塔-SiNWs结构上。这种方法允许金字塔-SiNWs衬底上的ORP传感器检测低至1ppb的NH3,这是报告的最低检测限(LOD),与平坦SiNWs衬底上的ORP传感器相比具有更高的响应速率。传感器还表现出用于NH3气体检测的良好灵敏度和稳定性。结果表明了ORP-金字塔-SiNWs结构传感器的可行性和潜在应用,在食品安全领域,疾病监测,和环境保护,等。
    NH3is widely existed in the environment and is closely associated with various health issues. Additionally, detecting the small amounts of NH3exhaled by patients with liver and kidney diseases offers potential opportunities for painless early disease diagnosis. Therefore, there is an urgent need for a convenient, rapid, and highly sensitive real-time NH3monitoring method. This work presents a high-performance NH3sensor based on olfactory receptor-derived peptides (ORPs) on a pyramid silicon nanowires (SiNWs) structure substrate. First, we successfully fabricated the pyramid-SiNWs structure on a silicon substrate using a chemical etching method. Subsequently, by dehydrative condensation reaction between the amino groups on APTES and the carboxyl groups of ORPs, ORPs were successfully immobilized onto the pyramid-SiNWs structure. This methodology allows the ORPs sensor on the pyramid-SiNWs substrate to detect NH3as low as 1 ppb, which was the reported lowest limit of detection, with a higher response rate compared to ORPs sensors on flat SiNWs substrates. The sensors also exhibit good sensitivity and stability for NH3gas detection. The results show the feasibility and potential applications of ORPs-pyramid-SiNWs structure sensors, in the fields of food safety, disease monitoring, and environmental protection, etc.
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  • 文章类型: Journal Article
    Bi2Se3作为一种新型的三维拓扑绝缘体(TI),由于其有趣的光学和电学特性,预计将成为下一代光电器件的有力候选者。在这项研究中,在平面Si衬底上成功制备了一系列厚度为5-40nm的Bi2Se3薄膜,并通过引入横向光伏效应(LPE)作为自供电光位置敏感探测器(PSD)。证明了Bi2Se3/平面Si异质结显示出450-1064nm的宽带响应范围,LPE响应强烈依赖于Bi2Se3层厚度,这主要归因于厚度调制的纵向载流子分离和传输。15nm厚的PSD显示出最佳性能,位置灵敏度高达89.7mV/mm,低于7%的非线性,响应时间快至62.6/49.4μs。此外,为了进一步提高LPE反应,通过为Si衬底构建纳米锥结构,建立了一种新型的Bi2Se3/金字塔-Si异质结。由于异质结中光吸收能力的提高,位置灵敏度大幅提升至178.9mV/mm,与Bi2Se3/平面Si异质结器件相比,增加了199%。同时,由于Bi2Se3薄膜优异的导电性能,其非线性度仍保持在10%以内。此外,在新提出的PSD中还实现了173/97.4μs的超快响应速度,具有出色的稳定性和可重复性。该结果不仅证明了TI在PSD中的巨大潜力,而且为调整其性能提供了一种有希望的方法。
    Bi2Se3, as a novel 3D topological insulator (TI), is expected to be a strong candidate for next-generation optoelectronic devices due to its intriguing optical and electrical properties. In this study, a series of Bi2Se3 films with different thicknesses of 5-40 nm were successfully prepared on planar-Si substrates and developed as self-powered light position-sensitive detectors (PSDs) by introducing lateral photovoltaic effect (LPE). It is demonstrated that the Bi2Se3/planar-Si heterojunction shows a broad-band response range of 450-1064 nm, and the LPE response is strongly dependent on the Bi2Se3 layer thickness, which can be mainly attributed to the thickness-modulated longitudinal carrier separation and transport. The 15 nm thick PSD shows the best performance with a position sensitivity of up to 89.7 mV/mm, a nonlinearity of lower than 7%, and response time as fast as 62.6/49.4 μs. Moreover, to further enhance the LPE response, a novel Bi2Se3/pyramid-Si heterojunction is built by constructing a nanopyramid structure for the Si substrate. Owing to the improvement of the light absorption capability in the heterojunction, the position sensitivity is largely boosted up to 178.9 mV/mm, which gets an increment of 199% as compared with that of the Bi2Se3/planar-Si heterojunction device. At the same time, the nonlinearity is still kept within 10% as well due to the excellent conduction property of the Bi2Se3 film. In addition, an ultrafast response speed of 173/97.4 μs is also achieved in the newly proposed PSD with excellent stability and reproducibility. This result not only demonstrates the great potential of TIs in PSD but also provides a promising approach for tuning its performance.
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  • 文章类型: Journal Article
    具有宽带宽和高吸收率的微波吸收材料在空中(OTA)测试中发挥着越来越重要的作用。在这项工作中,以阻燃吸收剂为填料,制备了一种金字塔吸波材料。此外,为了进一步提高吸波材料的阻燃性能,采用了涂层。为了获得优异的微波吸收性能(MWAP),采用高频结构模拟器(HFSS)设计结构材料。这里,总高度,基础高度,金字塔顶端的斩首高度,金字塔之间的距离,和其他参数进行了分析;然后,实现了实际加工成型。-30dB的MWAP在2.7-18GHz实现,和-10dB的MWAP也满足在2-18GHz。特别是,该研究还研究了大角度的MWAP,可以满足2-18GHz-10dB的MWAP和4-18GHz-30dB的MWAP。最重要的是,探讨了金字塔结构的吸收机理。通过金字塔中电磁场的分布证明了尖端的影响。由于金字塔的阻抗梯度,它可以被视为多层微波吸收材料,为今后的工程应用提供了有效的研究思路和方法。
    Microwave-absorbing materials with wide bandwidth and high absorptivity are increasingly playing an important role in over-the-air (OTA) testing. In this work, a kind of pyramid absorbing material was prepared using flame-retardant absorbers as the filler. In addition, a coating was used to further improve the flame-retardant properties of the microwave-absorbing material. To obtain excellent microwave absorption performance (MWAP), a high-frequency structure simulator (HFSS) was adopted to design structural materials. Here, the total height, the base height, the decapitation height of the pyramid tip, the distance between the pyramids, and other parameters were analyzed; then, the actual processing and molding were realized. The MWAP of -30 dB was achieved at 2.7-18 GHz, and the MWAP of -10 dB was also met at 2-18 GHz. In particular, the study also investigated the MWAP of large angle, which can meet the MWAP of -10 dB at 2-18 GHz and MWAP of -30 dB at 4-18 GHz. Most importantly, the absorption mechanism of the pyramid structure was explored. The influence of the tip was proved by the distribution of the electromagnetic field in the pyramid. It can be regarded as a multilayer microwave-absorbing material due to the impedance gradient of the pyramid, which can provide an effective research idea and method for future engineering applications.
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  • 文章类型: Journal Article
    超声(US)是用于评估乳腺病变的恶性特征的重要成像方式。在过去的十年里,已经开发了许多机器学习模型,用于在美国图像上自动区分乳腺癌与正常乳腺癌,但很少有基于乳腺影像报告和数据系统(BI-RADS)分类的图像。这项工作旨在开发一种模型,用于使用具有新的多类US图像数据集的BI-RADS分类框架对US乳腺病变进行分类。我们提出了一种深度模型,该模型将新颖的金字塔三重深度特征生成器(PTDFG)与基于三个预训练网络的迁移学习相结合,以创建深度特征。应用双线性插值将输入图像分解为四个尺寸连续较小的图像,用预先训练的网络构成一个四级金字塔,用于下游特征生成。将邻域成分分析应用于生成的特征,以选择每个网络的1,000个信息量最大的特征,将其馈送到支持向量机分类器以使用十倍交叉验证策略进行自动分类。我们提出的模型使用新的US图像数据集进行了验证,该数据集包含1,038张图像,分为八个BI-RADS类别和组织病理学结果。我们定义了三种分类方案:案例1涉及将所有图像分为八类;案例2,将乳腺US图像分为五种BI-RADS类别;案例3,将BI-RADS4病变分为良性和恶性类别。我们基于PTDFG的迁移学习模型获得了79.29%的准确率,80.42%,案例1、案例2和案例3分别为88.67%。
    Ultrasound (US) is an important imaging modality used to assess breast lesions for malignant features. In the past decade, many machine learning models have been developed for automated discrimination of breast cancer versus normal on US images, but few have classified the images based on the Breast Imaging Reporting and Data System (BI-RADS) classes. This work aimed to develop a model for classifying US breast lesions using a BI-RADS classification framework with a new multi-class US image dataset. We proposed a deep model that combined a novel pyramid triple deep feature generator (PTDFG) with transfer learning based on three pre-trained networks for creating deep features. Bilinear interpolation was applied to decompose the input image into four images of successively smaller dimensions, constituting a four-level pyramid for downstream feature generation with the pre-trained networks. Neighborhood component analysis was applied to the generated features to select each network\'s 1,000 most informative features, which were fed to support vector machine classifier for automated classification using a ten-fold cross-validation strategy. Our proposed model was validated using a new US image dataset containing 1,038 images divided into eight BI-RADS classes and histopathological results. We defined three classification schemes: Case 1 involved the classification of all images into eight categories; Case 2, classification of breast US images into five BI-RADS classes; and Case 3, classification of BI-RADS 4 lesions into benign versus malignant classes. Our PTDFG-based transfer learning model attained accuracy rates of 79.29%, 80.42%, and 88.67% for Case 1, Case 2, and Case 3, respectively.
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  • 文章类型: Research Support, Non-U.S. Gov\'t
    In this study, we developed a novel three-dimensional (3D) cancer cell chip using a three-floor hierarchical 3D pyramid structure (3D pyramid) to simulate 3D tumor cell growth in vitro and to detect anticancer drugs. The proposed 3D pyramidbased cancer cell chip offered substantial advantages for the agglomerate formation of tumor cells, in which cells could be maintained as tumor spheroids for up to 3 weeks. Soon after HeLa tumor cells adhered to the micropatterned pillar sidewalls, they were suspended between the pillars based on scanning electron microscopy images. Treatment with the anticancer drug oleanolic acid resulted in 46.33% and 5.86% apoptotic cells on the 2D plate and 3D pyramid-based cell chip, respectively, compared with only 0.06% apoptotic cells in the control. The increase in chemoresistance to anticancer drugs in the 3D pyramid-based cell chip might be a result of cell confluence and hypoxia due to the spheroid formation of tumor cells in the 3D pyramid structure. These results indicated that the proposed cell chip could potentially be used for anticancer drug screening or can be incorporated into other models aimed at prolonging various cell functions in culture.
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