Proteasome 20S

  • 文章类型: Journal Article
    吡虫啉(IMI),世界上使用最广泛的新烟碱类杀菌剂,在重复和单一治疗后产生认知障碍。然而,对产生这种效应的可能机制研究甚少。胆碱能神经传递调节认知功能。大多数胆碱能神经元体存在于基底前脑(BF)中,调节记忆和学习过程,它们的功能障碍或丧失会导致认知能力下降。BFSN56胆碱能野生型或乙酰胆碱酯酶(AChE),β-淀粉样蛋白前体蛋白(βAPP),Tau,糖原合酶激酶-3-β(GSK3β),β-位点-淀粉样蛋白前体-蛋白质裂解酶1(BACE1),和/或核因子-红细胞-2相关因子-2(NRF2)沉默的细胞用IMI(1μM至800μM)处理1天和14天,有或没有重组热休克蛋白-70(rHSP70),重组蛋白酶体20S(rP20S)和有或没有N-乙酰半胱氨酸(NAC)来确定介导这种作用的可能机制。IMI治疗1天和14天通过AChE抑制改变了胆碱能传递,部分通过氧化应激的产生引发细胞死亡,AChE-S过表达,HSP70下调,P20S抑制,和Aβ和Tau肽积累。IMI通过活性氧产生和抗氧化剂NRF2途径下调产生氧化应激,并通过BACE1、GSK3β诱导Aβ和Tau积累,HSP70和P20S功能障碍。这些结果可能有助于确定IMI暴露后观察到的产生认知功能障碍的机制,并提供新的治疗工具。
    Imidacloprid (IMI), the most widely used worldwide neonicotinoid biocide, produces cognitive disorders after repeated and single treatment. However, little was studied about the possible mechanisms that produce this effect. Cholinergic neurotransmission regulates cognitive function. Most cholinergic neuronal bodies are present in the basal forebrain (BF), regulating memory and learning process, and their dysfunction or loss produces cognition decline. BF SN56 cholinergic wild-type or acetylcholinesterase (AChE), β-amyloid-precursor-protein (βAPP), Tau, glycogen-synthase-kinase-3-beta (GSK3β), beta-site-amyloid-precursor-protein-cleaving enzyme 1 (BACE1), and/or nuclear-factor-erythroid-2-related-factor-2 (NRF2) silenced cells were treated for 1 and 14 days with IMI (1 μM to 800 μM) with or without recombinant heat-shock-protein-70 (rHSP70), recombinant proteasome 20S (rP20S) and with or without N-acetyl-cysteine (NAC) to determine the possible mechanisms that mediate this effect. IMI treatment for 1 and 14 days altered cholinergic transmission through AChE inhibition, and triggered cell death partially through oxidative stress generation, AChE-S overexpression, HSP70 downregulation, P20S inhibition, and Aβ and Tau peptides accumulation. IMI produced oxidative stress through reactive oxygen species production and antioxidant NRF2 pathway downregulation, and induced Aβ and Tau accumulation through BACE1, GSK3β, HSP70, and P20S dysfunction. These results may assist in determining the mechanisms that produce cognitive dysfunction observed following IMI exposure and provide new therapeutic tools.
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  • 文章类型: Journal Article
    蛋白质稳态是正常生命活动的基础,而蛋白酶体家族在这一过程中起着极其重要的作用。蛋白酶体20S是具有两个α环和两个β环重叠的同心圆结构。蛋白酶体20S可以通过与各种亚基(例如19S,11S,和200PA),其通过其活性亚基β1、β2和β5进行。蛋白酶体可以降解错误折叠的,过量的蛋白质来维持体内平衡。同时,它可以被肿瘤用来降解过度增殖的蛋白质和不需要的蛋白质来支持它们的生长。蛋白酶体可以从NF-κB和p53等肿瘤信号通路、细胞周期、免疫调节,和抗药性。已发现蛋白酶体编码基因在多种肿瘤中过表达,为癌症治疗提供了一个潜在的新靶点。此外,蛋白酶体抑制剂,如硼替佐米,Carfilzomib,和艾沙佐米已作为多发性骨髓瘤的一线治疗方法投入临床应用。越来越多的研究表明,它在肝细胞癌等其他肿瘤中也有不同的治疗效果,非小细胞肺癌,胶质母细胞瘤,和神经母细胞瘤.然而,蛋白酶体抑制剂由于它们在其他肿瘤中的耐受性和单一性,效果不大。因此,需要进一步研究它们的作用机制和药物相互作用,以研究它们的治疗潜力.
    Protein homeostasis is the basis of normal life activities, and the proteasome family plays an extremely important function in this process. The proteasome 20S is a concentric circle structure with two α rings and two β rings overlapped. The proteasome 20S can perform both ATP-dependent and non-ATP-dependent ubiquitination proteasome degradation by binding to various subunits (such as 19S, 11S, and 200 PA), which is performed by its active subunit β1, β2, and β5. The proteasome can degrade misfolded, excess proteins to maintain homeostasis. At the same time, it can be utilized by tumors to degrade over-proliferate and unwanted proteins to support their growth. Proteasomes can affect the development of tumors from several aspects including tumor signaling pathways such as NF-κB and p53, cell cycle, immune regulation, and drug resistance. Proteasome-encoding genes have been found to be overexpressed in a variety of tumors, providing a potential novel target for cancer therapy. In addition, proteasome inhibitors such as bortezomib, carfilzomib, and ixazomib have been put into clinical application as the first-line treatment of multiple myeloma. More and more studies have shown that it also has different therapeutic effects in other tumors such as hepatocellular carcinoma, non-small cell lung cancer, glioblastoma, and neuroblastoma. However, proteasome inhibitors are not much effective due to their tolerance and singleness in other tumors. Therefore, further studies on their mechanisms of action and drug interactions are needed to investigate their therapeutic potential.
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  • 文章类型: Journal Article
    蛋白酶体抑制剂在细胞培养物中具有有效的抗肿瘤活性,可通过干扰细胞周期蛋白的降解诱导细胞凋亡。20S蛋白酶体被认为是令人满意的靶标,具有针对人类免疫防御的持久特性,并且必须降解某些重要蛋白质。本研究旨在确定20S蛋白酶体的潜在抑制剂,特别是β5亚基,使用基于结构的虚拟筛选和分子对接,以减少配体的数量,应符合实验测定。从ASINEX数据库中筛选出总共4961个具有抗癌活性的分子。然后将显示较高对接亲和力的过滤化合物用于更复杂的分子对接模拟中,用AutoDockVina进行验证。最后,与保留的阳性对照相比,六个药物分子(BDE28974746,BDE25657353,BDE29746159,BDD27844484,BDE29746109和BDE29746162)表现出高度显着的相互作用。在这六个分子中,与卡非佐米和硼替佐米相比,三个分子(BDE28974746,BDE25657353和BDD27844484)显示出高的结合亲和力和结合能。每种情况下前三种药物分子的分子模拟和动力学研究使我们能够得出有关其与β5亚基的稳定性的进一步结论。计算吸收,分布,新陈代谢,对这些衍生物的排泄和毒性研究显示了令人鼓舞的结果,毒性非常低,分布,和吸收。这些化合物可作为新的蛋白酶体抑制剂开发中进一步生物学评估的潜在目标。由RamaswamyH.Sarma沟通。
    Proteasome inhibitors have effective anti-tumor activity in cell culture and can induce apoptosis by interfering with the degradation of cell cycle proteins. 20S Proteasome is acknowledged to be a satisfactory target that has persistent properties against the human immune defense and is obligatory for the degradation of some vital proteins. This study aimed to identify potential inhibitors against 20S proteasome, specifically the β5 subunit, using structure-based virtual screening and molecular docking to reduce the number of ligands that should be eligible for experimental assays. A total of 4961 molecules with anticancer activity were screened from the ASINEX database. The filtered compounds that showed higher docking affinity were then used in more sophisticated molecular docking simulations with AutoDock Vina for validation. Finally, six drug molecules (BDE 28974746, BDE 25657353, BDE 29746159, BDD 27844484, BDE 29746109, and BDE 29746162) exhibited highly significant interactions compared to the positive controls were retained. Among these six molecules, three molecules (BDE 28974746, BDE 25657353, and BDD 27844484) showed high binding affinity and binding energy compared with Carfilzomib and Bortezomib. Molecular simulation and dynamics studies of the top three drug molecules in each case allowed us to draw further conclusions about their stability with the β5 subunit. Computed absorption, distribution, metabolism, excretion and toxicity studies on these derivatives showed encouraging results with very low toxicity, distribution, and absorption. These compounds may serve as potential hits for further biological evaluation in the development of new proteasome inhibitors.Communicated by Ramaswamy H. Sarma.
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  • 文章类型: Journal Article
    大脑中金属的积累与有毒蛋白质有关,像淀粉样蛋白(Aβ),地层,积累,和聚合,导致神经变性.金属下调正确的折叠,分解,或有毒蛋白质的降解机制,作为热休克蛋白(HSPs)和蛋白酶体。7-氨基-菲啶-6(5H)-酮衍生物(APH)通过其抗氧化作用对金属诱导的细胞死亡具有神经保护作用,独立于它们的螯合活性。然而,另外的神经保护机制似乎涉及。我们测试了最有希望的APH化合物(APH1-5,10-100μM)防止金属诱导的Aβ蛋白聚集的化学能力;APH1-5对HSP70和蛋白酶体20S(P20S)表达的影响,金属对Aβ形成的影响以及HSP70和P20S参与该过程,和APH1-5对SN56细胞中Aβ蛋白(1μM)和金属的神经保护作用。我们的结果表明,APH1-5化合物在化学上避免了金属诱导的Aβ蛋白聚集,并诱导了HSP70和P20S的表达。此外,铁和镉通过下调HSP70和P20S诱导Aβ蛋白形成。最后,APH1-5化合物可防止Aβ蛋白诱导的神经元细胞死亡,部分或完全逆转这种影响。这些数据可能有助于为金属和其他环境污染物引起的神经毒性效应提供新的治疗方法,特别是由有毒蛋白质介导的。
    Brain\'s metals accumulation is associated with toxic proteins, like amyloid-proteins (Aβ), formation, accumulation, and aggregation, leading to neurodegeneration. Metals downregulate the correct folding, disaggregation, or degradation mechanisms of toxic proteins, as heat shock proteins (HSPs) and proteasome. The 7-amino-phenanthridin-6(5H)-one derivatives (APH) showed neuroprotective effects against metal-induced cell death through their antioxidant effect, independently of their chelating activity. However, additional neuroprotective mechanisms seem to be involved. We tested the most promising APH compounds (APH1-5, 10-100 μM) chemical ability to prevent metal-induced Aβ proteins aggregation; the APH1-5 effect on HSP70 and proteasome 20S (P20S) expression, the metals effect on Aβ formation and the involvement of HSP70 and P20S in the process, and the APH1-5 neuroprotective effects against Aβ proteins (1 μM) and metals in SN56 cells. Our results show that APH1-5 compounds chemically avoid metal-induced Aβ proteins aggregation and induce HSP70 and P20S expression. Additionally, iron and cadmium induced Aβ proteins formation through downregulation of HSP70 and P20S. Finally, APH1-5 compounds protected against Aβ proteins-induced neuronal cell death, reversing partially or completely this effect. These data may help to provide a new therapeutic approach against the neurotoxic effect induced by metals and other environmental pollutants, especially when mediated by toxic proteins.
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  • 文章类型: Journal Article
    多发性骨髓瘤是一种无法治愈的浆细胞肿瘤疾病,占发达国家诊断的所有血液恶性肿瘤的约10-15%。蛋白酶体是多发性骨髓瘤的关键参与者,蛋白酶体抑制剂是目前的一线治疗方法。然而,这些与获得性耐药导致的临床疗效有限有关.克服这个问题的解决方案之一是多药理学方法,即联合治疗和多靶向药物。目前正在探索几种多药理学途径。EZH2和蛋白酶体20S的同时抑制仍有待研究,尽管令人鼓舞的证据表明两者之间的治疗协同作用。因此,为了弥补这一差距,我们提出了一种全面的硅片策略来寻找新的双靶点抑制剂.首先,我们评估了两个口袋的特征,并比较了EZH2和蛋白酶体20S抑制剂的化学空间,建立双重瞄准的可行性。随后对来自ChEMBL25的EZH2和蛋白酶体20S抑制剂进行了分子对接计算,从中我们得出了一个预测模型,以在蛋白酶体20S化合物中提出新的EZH2抑制剂。反之亦然,产生了两个双重抑制剂。互补,我们为每个目标构建了一个机器学习QSAR模型,但意识到它们对我们数据的应用非常有限,因为每个数据集占据不同的化学空间区域。我们最终对两个目标的两次对接命中进行了分子动力学模拟。总的来说,我们得出的结论是,其中一种命中化合物特别有希望作为双重抑制剂候选物,表现出与两个靶标的广泛氢键。此外,这项工作是如何合理地处理双靶向药物发现项目的框架,从目标的选择到新命中化合物的预测。
    Multiple myeloma is an incurable plasma cell neoplastic disease representing about 10-15% of all haematological malignancies diagnosed in developed countries. Proteasome is a key player in multiple myeloma and proteasome inhibitors are the current first-line of treatment. However, these are associated with limited clinical efficacy due to acquired resistance. One of the solutions to overcome this problem is a polypharmacology approach, namely combination therapy and multitargeting drugs. Several polypharmacology avenues are currently being explored. The simultaneous inhibition of EZH2 and Proteasome 20S remains to be investigated, despite the encouraging evidence of therapeutic synergy between the two. Therefore, we sought to bridge this gap by proposing a holistic in silico strategy to find new dual-target inhibitors. First, we assessed the characteristics of both pockets and compared the chemical space of EZH2 and Proteasome 20S inhibitors, to establish the feasibility of dual targeting. This was followed by molecular docking calculations performed on EZH2 and Proteasome 20S inhibitors from ChEMBL 25, from which we derived a predictive model to propose new EZH2 inhibitors among Proteasome 20S compounds, and vice versa, which yielded two dual-inhibitor hits. Complementarily, we built a machine learning QSAR model for each target but realised their application to our data is very limited as each dataset occupies a different region of chemical space. We finally proceeded with molecular dynamics simulations of the two docking hits against the two targets. Overall, we concluded that one of the hit compounds is particularly promising as a dual-inhibitor candidate exhibiting extensive hydrogen bonding with both targets. Furthermore, this work serves as a framework for how to rationally approach a dual-targeting drug discovery project, from the selection of the targets to the prediction of new hit compounds.
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  • 文章类型: Journal Article
    Proteasome deregulation has been related with several human diseases and, consequently, a detailed knowledge of its inhibition is essential for the design of efficient and selective drugs. The present paper is focused on the inhibition mechanism of proteasome 20S on the β5-subunit by dihydroeponemycin, an epoxyketone. The presence of a dual electrophilic center in this α,β-epoxyketone allows its irreversible bind to the active site by formation of two strong covalent bonds with the N-terminal threonine residue. Free energy surfaces for all possible mechanisms have been generated in terms of potentials of mean force (PMFs) within hybrid QM/MM potentials, with the QM subset of atoms described at semiempirical (AM1) and DFT (M06-2X) level. Two alternative reaction pathways, differentiated by reversing the order of chemical steps in full catalytic process and the product species, were explored. The resulting activation free energy barriers (ΔG‡) indicate that the most favourable mechanism is the one in which the reaction starts with epoxide-ring opening and finishing with 1,4-oxazepane product formation. This result is in agreement with the seven-membered product of inhibition recently determined by X-ray crystallography. Finally, calculations of primary kinetic isotope effects (1º-KIEs) on Cα and Cβ of epoxide and secondary 2º-KIE on C1 reveal their possible application in distinguishing between the formation of six- and seven-membered product and verifying the reaction mechanism proposed in the present work.
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  • 文章类型: Journal Article
    蛋白酶体降解途径在调节多种蛋白质功能中起重要作用,不仅控制它们的周转,而且控制细胞的生理行为。这使得它成为病原体的有吸引力的目标,尤其是依赖宿主细胞机制进行繁殖和致病的病毒。病毒已经在进化上开发了各种策略来操纵宿主蛋白酶体机制,从而创造有利于其自身生存和复制的细胞环境。人类免疫缺陷病毒-1(HIV-1)是最可怕的病毒之一,由于其高进化率而在世界范围内迅速传播并导致高死亡率。这里,我们回顾了HIV-1利用细胞蛋白酶体机制的各种机制,以逃避宿主限制因子和宿主免疫系统的组成部分,以支持其自身的增殖,并成功创建了感染。
    Proteasomal degradation pathways play a central role in regulating a variety of protein functions by controlling not only their turnover but also the physiological behavior of the cell. This makes it an attractive target for the pathogens, especially viruses which rely on the host cellular machinery for their propagation and pathogenesis. Viruses have evolutionarily developed various strategies to manipulate the host proteasomal machinery thereby creating a cellular environment favorable for their own survival and replication. Human immunodeficiency virus-1 (HIV-1) is one of the most dreadful viruses which has rapidly spread throughout the world and caused high mortality due to its high evolution rate. Here, we review the various mechanisms adopted by HIV-1 to exploit the cellular proteasomal machinery in order to escape the host restriction factors and components of host immune system for supporting its own multiplication, and successfully created an infection.
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  • 文章类型: Journal Article
    OBJECTIVE: Oxazolinodoxorubicin (O-DOX) and oxazolinodaunorubicin (O-DAU) are derivatives of anthracyclines (DOX and DAU) with a modified daunosamine moiety. We aimed to clarify their mechanisms of action by investigating intracellular accumulation and effects on the cell cycle, phosphatidylserine externalization, and proteasome 20S activity.
    METHODS: Experimental model consisted of SKOV-3, A549 and HepG2 cells. Compounds were used at the concentration of 80nM. Intracellular accumulation, drug uptake, and proteasome 20S activity were evaluated by fluorimetric methods. The effects on the cell cycle and phosphatidylserine externalization were measured by flow cytometry.
    RESULTS: O-DOX was equivalent to DOX in terms of inducing G2/M arrest, but O-DAU was less potent in SKOV-3, HepG2, and A549 cells. O-DOX had the greatest effect on initiating apoptosis in all tested cells. Externalization of phosphatidylserine was significantly higher following O-DOX treatment compared with control cells and cells incubated with DOX. The intracellular accumulation and uptake of the derivatives were similar to those of the reference drugs. Tested compounds are able to activate proteasome 20S activity.
    CONCLUSIONS: Our results extended the understanding of the toxicity, mechanism of action, and biochemical properties of oxazoline derivatives of doxorubicin and daunorubicin, including their effects on cell cycle, apoptosis and DNA degradation.
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