Profilins

Profilins
  • 文章类型: Journal Article
    单体结合蛋白profilin1(PFN1)在肌动蛋白聚合中起着至关重要的作用。然而,PFN1的突变也与遗传性肌萎缩侧索硬化症有关,导致广泛的细胞病理,这不能用其作为细胞溶质肌动蛋白组装因子的主要功能来解释。这意味着有重要的,PFN1在细胞生理学中尚未发现的作用。在这里,我们筛选了与PFN1功能丧失相关的新表型的敲除细胞,并发现线粒体自噬显著上调。的确,尽管成功的自噬体形成,与溶酶体融合,和其他线粒体质量控制途径的激活,PFN1敲除细胞累积去极化,代谢特性改变的畸形线粒体。令人惊讶的是,我们还发现PFN1存在于线粒体内部,并提供了与PFN1丢失相关的线粒体缺陷不是由胞质溶胶中肌动蛋白聚合减少引起的证据。这些发现表明PFN1在维持线粒体完整性方面具有以前未被认识的作用,并强调了可能由PFN1失调引起的新的致病机制。
    The monomer-binding protein profilin 1 (PFN1) plays a crucial role in actin polymerization. However, mutations in PFN1 are also linked to hereditary amyotrophic lateral sclerosis, resulting in a broad range of cellular pathologies which cannot be explained by its primary function as a cytosolic actin assembly factor. This implies that there are important, undiscovered roles for PFN1 in cellular physiology. Here we screened knockout cells for novel phenotypes associated with PFN1 loss of function and discovered that mitophagy was significantly upregulated. Indeed, despite successful autophagosome formation, fusion with the lysosome, and activation of additional mitochondrial quality control pathways, PFN1 knockout cells accumulate depolarized, dysmorphic mitochondria with altered metabolic properties. Surprisingly, we also discovered that PFN1 is present inside mitochondria and provide evidence that mitochondrial defects associated with PFN1 loss are not caused by reduced actin polymerization in the cytosol. These findings suggest a previously unrecognized role for PFN1 in maintaining mitochondrial integrity and highlight new pathogenic mechanisms that can result from PFN1 dysregulation.
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  • 文章类型: Journal Article
    多发性骨髓瘤(MM)是一种无法治愈的血液系统恶性肿瘤,生存率低。越来越多的证据表明,乳酸修饰在肿瘤发生中起着至关重要的作用。然而,关于乳酸化相关基因(LRGs)预测MM预后的研究还很有限。从基因表达综合数据库研究MM和正常样品之间的差异表达的LRG(DELRG)。应用单变量Cox回归和LASSOCox回归分析构建与总生存期相关的基因标签。在两个外部数据集中验证了签名。进一步构建和评价列线图。此外,富集分析,免疫分析,并对两组进行药物敏感性分析。进行qPCR和免疫荧光染色以验证PFN1的表达和定位。进行CCK-8和流式细胞术以验证生物学功能。总共9个LRG(TRIM28,PPIA,SOD1,RRP1B,IARS2,RB1,PFN1,PRCC,选择FABP5)来建立预后特征。Kaplan-Meier生存曲线显示,在训练和验证队列中,高风险组患者的预后明显较差。根据LRGs签名和临床特征构建列线图,并通过校准曲线和C指数显示出优异的预测能力。此外,生物途径,免疫状态,高危组和低危组对化疗药物的敏感性也不同。此外,中枢基因PFN1在MM中高表达,敲低PFN1诱导细胞周期停滞,抑制细胞增殖,促进细胞凋亡。总之,我们的研究表明,LRGs标记是一种有前景的MM生物标志物,可以有效地早期区分高危患者并预测预后.
    Multiple myeloma (MM) is an incurable hematological malignancy with poor survival. Accumulating evidence reveals that lactylation modification plays a vital role in tumorigenesis. However, research on lactylation-related genes (LRGs) in predicting the prognosis of MM remains limited. Differentially expressed LRGs (DELRGs) between MM and normal samples were investigated from the Gene Expression Omnibus database. Univariate Cox regression and LASSO Cox regression analysis were applied to construct gene signature associated with overall survival. The signature was validated in two external datasets. A nomogram was further constructed and evaluated. Additionally, Enrichment analysis, immune analysis, and drug chemosensitivity analysis between the two groups were investigated. qPCR and immunofluorescence staining were performed to validate the expression and localization of PFN1. CCK-8 and flow cytometry were performed to validate biological function. A total of 9 LRGs (TRIM28, PPIA, SOD1, RRP1B, IARS2, RB1, PFN1, PRCC, and FABP5) were selected to establish the prognostic signature. Kaplan-Meier survival curves showed that high-risk group patients had a remarkably worse prognosis in the training and validation cohorts. A nomogram was constructed based on LRGs signature and clinical characteristics, and showed excellent predictive power by calibration curve and C-index. Moreover, biological pathways, immunologic status, as well as sensitivity to chemotherapy drugs were different between high- and low-risk groups. Additionally, the hub gene PFN1 is highly expressed in MM, knocking down PFN1 induces cell cycle arrest, suppresses cell proliferation and promotes cell apoptosis. In conclusion, our study revealed that LRGs signature is a promising biomarker for MM that can effectively early distinguish high-risk patients and predict prognosis.
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  • 文章类型: Journal Article
    Artv4.01是一种众所周知的profilin蛋白,属于泛过敏原组,通常参与引发过敏性哮喘,多重过敏,和交叉敏感。由于其起源,它也被称为艾草。艾草粗提取物用于过敏原特异性免疫疗法(AIT)。重组Artv4.01(rArtv4.01)是否可以通过皮下免疫疗法(SCIT)产生体内免疫耐受性仍然难以捉摸。在这项研究中,研究rArtv4.01,Th2,Th1,Treg的体内免疫反应,检测Th17型相关细胞因子和免疫细胞表型,促进对潜在机制的探索。使用重组技术进行Artv4.01的表达和纯化。通过艾草花粉提取物的皮下致敏和鼻内刺激诱导过敏性哮喘雌性BALB/c小鼠。使用rArtv4.01和艾草花粉提取物进行无佐剂的SCIT2周。面对挑战后,免疫球蛋白E(IgE)的水平,细胞因子,和炎症细胞通过酶联免疫吸附试验(ELISA)和血清组织学检查进行评估,支气管肺泡灌洗液(BALF),和肺组织。随后在接受rArtv4.01和艾草花粉提取物的处理组之间比较这些参数。rArtv4.01蛋白表达,其具有高纯度(>90%)和致敏效力。与花粉提取物相比,rArtv4.01在减少白细胞(WBC)数量方面优于总有核细胞(跨国公司),BALF中单核细胞(MNs)和肺部炎症程度(1.77±0.99vs.2.31±0.80,P>0.05)。与模型组相比,只有rArtv4.01降低了血清IgE水平(1.19±0.25vs.1.61±0.17μg/ml,P=0.062),以及Th2型相关细胞因子的水平(白细胞介素-4(IL-4)(107.18±16.17vs.132.47±20.85pg/ml,P<0.05)和IL-2(19.52±1.19vs.24.02±2.14pg/ml,P<0.05))。研究表明,rArtv4.01在减少BALF中炎性细胞数量方面优于花粉提取物,肺炎,促炎细胞因子的水平,和血清IgE水平。这些发现证实了Artv4.01可能是过敏原特异性免疫治疗的潜在候选蛋白。
    Art v4.01 is a well-known profilin protein belonging to the pan-allergens group and is commonly involved in triggering allergic asthma, polyallergy, and cross-sensitization. It is also referred to as Wormwood due to its origin. Crude wormwood extracts are applied for allergen-specific immunotherapy (AIT). Whether the recombinant Art v4.01 (rArt v4.01) can produce in vivo immunological tolerance by subcutaneous immunotherapy (SCIT) remains elusive. In this study, to investigate the in vivo immunological response of rArt v4.01, Th2, Th1, Treg, Th17 type-related cytokines and phenotypes of immune cells were tested, facilitating the exploration of the underlying mechanisms. The expression and purification of Art v4.01 were carried out using recombinant techniques. Allergic asthma female BALB/c mice were induced by subcutaneous sensitization of wormwood pollen extract and intranasal challenges. SCIT without adjuvant was performed using the rArt v4.01 and wormwood pollen extract for 2 weeks. Following exposure to challenges, the levels of immunoglobulin E (IgE), cytokines, and inflammatory cells were assessed through enzyme-linked immunosorbent assay (ELISA) and histological examination of sera, bronchoalveolar lavage fluid (BALF), and lung tissue. These parameters were subsequently compared between treatment groups receiving rArt v4.01 and wormwood pollen extract. The rArt v4.01 protein was expressed, which had a high purity (>90%) and an allergenic potency. Compared with the pollen extract, rArt v4.01 was superior in terms of reducing the number of white blood cells (WBCs), total nucleated cells (TNCs), and monocytes (MNs) in BALF and the degree of lung inflammation (1.77±0.99 vs. 2.31±0.80, P > 0.05). Compared with the model group, only rArt v4.01 reduced serum IgE level (1.19±0.25 vs. 1.61±0.17 μg/ml, P = 0.062), as well as the levels of Th2 type-related cytokines (interleukin-4 (IL-4) (107.18±16.17 vs. 132.47±20.85 pg/ml, P < 0.05) and IL-2 (19.52±1.19 vs. 24.02±2.14 pg/ml, P < 0.05)). The study suggested that rArt v4.01 was superior to pollen extract in reducing the number of inflammatory cells in BALF, pneumonitis, levels of pro-inflammatory cytokines, and serum IgE level. These findings confirmed that Art v4.01 could be a potential candidate protein for allergen-specific immunotherapy.
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  • 文章类型: Journal Article
    来自Salsolakali的花粉,即,saltwort,俄罗斯蓟,是南欧沿海地区的主要过敏原来源,在土耳其,中亚,和伊朗。S.卡利过敏患者主要患有花粉热(即,鼻炎和结膜炎),哮喘,和过敏性皮肤症状。这项研究的目的是研究单个S.kali过敏原分子的重要性。Salk1,Salk2,Salk3,Salk4,Salk5和Salk6在大肠杆菌中表达为含有C末端六组氨酸标签的重组蛋白,并通过镍亲和层析纯化。通过SDS-PAGE分析重组变应原的纯度。它们的分子量是通过基质辅助激光解吸/电离飞行时间质谱法确定的,并通过圆二色性(CD)光谱研究了它们的折叠和二级结构。来自临床特征明确的S.kali过敏患者的血清用于IgE反应性和嗜碱性粒细胞活化实验。S.kali过敏原特异性IgE水平和特异性针对高度IgE交叉反应性蛋白蛋白和来自timothy草花粉的钙结合过敏原的IgE水平,Phlp12和Phlp7,分别为通过ImmunoCAP测量。在嗜碱性粒细胞活化实验中研究了天然S.kali花粉过敏原的致敏活性。当通过CD分析研究时,折叠重组S.kali变应原。重组变应原特异性IgE水平和变应原提取物特异性IgE水平的总和高度相关。萨尔k1和profilin,64%和49%的患者与IgE反应,分别,是最重要的过敏原,而其他S.kali过敏原的识别频率较低。profilin的特异性IgE水平最高。值得注意的是,Salk1阴性的患者中有37%对Phlp12表现出IgE反应性,强调了普遍存在的细胞骨架肌动蛋白结合蛋白的重要性,profilin,用于S.kali过敏患者IgE致敏的诊断。rPhlp12和rSalk4显示出等效的IgE反应性,profilin的临床重要性强调了profilin的临床重要性,因为profilin单致敏患者患有对盐草的呼吸道过敏症状。因此,profilin应包含在用于诊断的过敏原分子组中,以及用于治疗和预防S.kali过敏的分子过敏疫苗中。
    Pollen from Salsola kali, i.e., saltwort, Russian thistle, is a major allergen source in the coastal regions of southern Europe, in Turkey, Central Asia, and Iran. S. kali-allergic patients mainly suffer from hay-fever (i.e., rhinitis and conjunctivitis), asthma, and allergic skin symptoms. The aim of this study was to investigate the importance of individual S. kali allergen molecules. Sal k 1, Sal k 2, Sal k 3, Sal k 4, Sal k 5, and Sal k 6 were expressed in Escherichia coli as recombinant proteins containing a C-terminal hexahistidine tag and purified by nickel affinity chromatography. The purity of the recombinant allergens was analyzed by SDS-PAGE. Their molecular weight was determined by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, and their fold and secondary structure were studied by circular dichroism (CD) spectroscopy. Sera from clinically well-characterized S. kali-allergic patients were used for IgE reactivity and basophil activation experiments. S. kali allergen-specific IgE levels and IgE levels specific for the highly IgE cross-reactive profilin and the calcium-binding allergen from timothy grass pollen, Phl p 12 and Phl p 7, respectively, were measured by ImmunoCAP. The allergenic activity of natural S. kali pollen allergens was studied in basophil activation experiments. Recombinant S. kali allergens were folded when studied by CD analysis. The sum of recombinant allergen-specific IgE levels and allergen-extract-specific IgE levels was highly correlated. Sal k 1 and profilin, reactive with IgE from 64% and 49% of patients, respectively, were the most important allergens, whereas the other S. kali allergens were less frequently recognized. Specific IgE levels were highest for profilin. Of note, 37% of patients who were negative for Sal k 1 showed IgE reactivity to Phl p 12, emphasizing the importance of the ubiquitous cytoskeletal actin-binding protein, profilin, for the diagnosis of IgE sensitization in S. kali-allergic patients. rPhl p 12 and rSal k 4 showed equivalent IgE reactivity, and the clinical importance of profilin was underlined by the fact that profilin-monosensitized patients suffered from symptoms of respiratory allergy to saltwort. Accordingly, profilin should be included in the panel of allergen molecules for diagnosis and in molecular allergy vaccines for the treatment and prevention of S. kali allergy.
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  • 文章类型: Journal Article
    精神分裂症是一种严重的心理障碍。目前的诊断主要依靠临床症状,缺乏实验室证据,这使得很难做出准确的诊断,尤其是在早期阶段。使用4D-DIA蛋白质组学技术获得精神分裂症患者的血浆蛋白质谱,并与健康对照进行比较。此外,在精神分裂症和健康对照之间确定了79个DEP。GO功能分析显示DEP主要与毒性物质反应和血小板聚集有关,提示精神分裂症患者存在代谢和免疫失调。KEGG途径富集分析显示,DEP主要富集在趋化因子信号传导途径和细胞因子受体相互作用中。最终建立了诊断模型,包含三种蛋白质,即,PFN1、GAPDH和ACTBL2。该模型显示AUC值为0.972,表明其在准确识别精神分裂症方面的有效性。PFN1,GAPDH和ACTBL2显示出作为精神分裂症早期检测的生物标志物的潜力。我们的研究结果为精神分裂症的实验室诊断提供了新的见解。
    Schizophrenia is a severe psychological disorder. The current diagnosis mainly relies on clinical symptoms and lacks laboratory evidence, which makes it very difficult to make an accurate diagnosis especially at an early stage. Plasma protein profiles of schizophrenia patients were obtained and compared with healthy controls using 4D-DIA proteomics technology. Furthermore, 79 DEPs were identified between schizophrenia and healthy controls. GO functional analysis indicated that DEPs were predominantly associated with responses to toxic substances and platelet aggregation, suggesting the presence of metabolic and immune dysregulation in patients with schizophrenia. KEGG pathway enrichment analysis revealed that DEPs were primarily enriched in the chemokine signaling pathway and cytokine receptor interactions. A diagnostic model was ultimately established, comprising three proteins, namely, PFN1, GAPDH and ACTBL2. This model demonstrated an AUC value of 0.972, indicating its effectiveness in accurately identifying schizophrenia. PFN1, GAPDH and ACTBL2 exhibit potential as biomarkers for the early detection of schizophrenia. The findings of our studies provide novel insights into the laboratory-based diagnosis of schizophrenia.
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  • 文章类型: Journal Article
    人类表达了15只公鸡,在基于肌动蛋白的过程中发挥关键作用,如胞质分裂,细胞运动性,和机械传导1,2。然而,缺乏与肌动蛋白丝(F-actin)结合的结构一直是理解形式蛋白功能的主要障碍。虽然formiins以其成核和拉长F-肌动蛋白3-7的能力而闻名,但一些formiins可以另外解聚,sever,或束F-肌动蛋白。两种哺乳动物的福尔马林,倒置formin-2(INF2)和透明-1(Dia1),证明了这种多样性。INF2显示出有效的切断活性,但延长8-11较弱,而Dia1具有有效的延长活性,但不切断4,8。使用低温电子显微镜(cryo-EM),我们揭示了INF2的五种结构状态和Dia1的两种状态,它们与F-肌动蛋白的中端和倒钩端结合。INF2和Dia1与这些位点结合不同,与他们独特的活动相一致。INF2的FH2和WH2结构域被定位为切断F-肌动蛋白,而Dia1似乎不适合切断。结构还显示了profilin-actin如何被传递到快速生长的带刺末端,以及随后如何将传入的单体转变为F-肌动蛋白构象并释放profilin。合并,此处介绍的七个结构提供了对Formins的F-肌动蛋白切断和伸长机制的逐步可视化。
    Humans express 15 formins that play crucial roles in actin-based processes, including cytokinesis, cell motility and mechanotransduction1,2. However, the lack of structures bound to the actin filament (F-actin) has been a major impediment to understanding formin function. Whereas formins are known for their ability to nucleate and elongate F-actin3-7, some formins can additionally depolymerize, sever or bundle F-actin. Two mammalian formins, inverted formin 2 (INF2) and diaphanous 1 (DIA1, encoded by DIAPH1), exemplify this diversity. INF2 shows potent severing activity but elongates weakly8-11 whereas DIA1 has potent elongation activity but does not sever4,8. Using cryo-electron microscopy (cryo-EM) we show five structural states of INF2 and two of DIA1 bound to the middle and barbed end of F-actin. INF2 and DIA1 bind differently to these sites, consistent with their distinct activities. The formin-homology 2 and Wiskott-Aldrich syndrome protein-homology 2 (FH2 and WH2, respectively) domains of INF2 are positioned to sever F-actin, whereas DIA1 appears unsuited for severing. These structures also show how profilin-actin is delivered to the fast-growing barbed end, and how this is followed by a transition of the incoming monomer into the F-actin conformation and the release of profilin. Combined, the seven structures presented here provide step-by-step visualization of the mechanisms of F-actin severing and elongation by formins.
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  • 文章类型: Journal Article
    Profilin在体外结合微管。然而,Vitriol及其同事的一项新研究(https://doi.org/10.1083/jcb.202309097)现在表明,profilin对细胞微管动力学的影响是间接的,是由于其对肌动蛋白动力学的影响,而不是其与微管的直接结合。
    Profilin binds microtubules in vitro. However, a new study by Vitriol and colleagues (https://doi.org/10.1083/jcb.202309097) now suggests that effects of profilin on microtubule dynamics in cells are indirect and result from its impact on actin dynamics rather than its direct binding to microtubules.
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  • 文章类型: Journal Article
    除了其在肌动蛋白组装中的作用外,已显示profilin1(PFN1)与微管蛋白结合并改变微管生长。然而,PFN1对细胞中微管的主要控制是通过微管蛋白的直接调节还是通过肌动蛋白的聚合间接进行的,还有待确定。这里,我们操纵了PFN1的表达,肌动蛋白丝组装,和肌动球蛋白收缩性,并表明长时间减少这些参数中的任何一个都会引起微管细胞骨架的适应性反应,在神经元过程中效果明显更明显。如果肌动球蛋白恢复,所有观察到的微管变化都是可逆的,认为PFN1对微管的调节主要通过肌动蛋白发生。此外,神经元过程中PFN1耗竭导致的细胞骨架修饰影响了基于微管的转运,并模拟了与神经退行性疾病相关的表型.这证明了肌动蛋白的缺陷如何引起其他细胞骨架成分的代偿反应,进而显著改变细胞功能。
    In addition to its well-established role in actin assembly, profilin 1 (PFN1) has been shown to bind to tubulin and alter microtubule growth. However, whether PFN1\'s predominant control over microtubules in cells occurs through direct regulation of tubulin or indirectly through the polymerization of actin has yet to be determined. Here, we manipulated PFN1 expression, actin filament assembly, and actomyosin contractility and showed that reducing any of these parameters for extended periods of time caused an adaptive response in the microtubule cytoskeleton, with the effect being significantly more pronounced in neuronal processes. All the observed changes to microtubules were reversible if actomyosin was restored, arguing that PFN1\'s regulation of microtubules occurs principally through actin. Moreover, the cytoskeletal modifications resulting from PFN1 depletion in neuronal processes affected microtubule-based transport and mimicked phenotypes that are linked to neurodegenerative disease. This demonstrates how defects in actin can cause compensatory responses in other cytoskeleton components, which in turn significantly alter cellular function.
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  • 文章类型: Journal Article
    背景:膀胱癌是泌尿系统最常见的恶性肿瘤,寻找新的可靠的生物标志物对膀胱癌的个体化治疗具有重要的临床意义。本研究旨在探讨核增殖抗原(Ki-67)或Profilin-1(PFN1)水平之间的相关性。临床病理特征,膀胱癌患者的术后预后。
    方法:在苏州大学附属第四医院行经尿道膀胱肿瘤电切术的膀胱癌患者,选择2019年1月至2021年1月的医院作为研究组(n=60),选取同期膀胱癌良性病变患者60例作为对照组。分析两组患者肿瘤及膀胱组织中Ki-67和PFN1的表达情况。Ki-67记录患者的病理参数并计算患者的术后预后。Ki-67与PFN1表达水平的相关性,病理参数,并对术后预后进行分析。
    结果:研究组中Ki-67和PFN1的阳性表达率分别为63.33%和73.33%,分别,显著高于对照组的阳性表达率(χ2=14.803、17.757,p<0.001)。Ki-67和PFN1的阳性表达率与组织学分级有关。临床分期,渗透,淋巴结转移,差异均有统计学意义(p<0.05)。非肌肉浸润性膀胱癌(NMIBC)的膀胱癌患者,高级组织学分级,Ta~T1临床分期,侵入性,和淋巴结转移患者的Ki-67阳性表达率高于肌层浸润性膀胱癌(MIBC),低级组织学分级,T2~T4,非侵入性,无淋巴结转移.Ki-67的高表达与性别无关,年龄,肿瘤直径,血管侵犯(p>0.05)。Ki-67阳性表达组的生存时间和3年生存率明显低于Ki-67阴性表达组(p<0.05)。PFN1阳性表达组的生存时间和3年生存率明显低于PFN1阴性表达组(p<0.05)。
    结论:Ki-67和PFN1在膀胱肿瘤组织中的阳性表达率明显高于膀胱组织。和病理模式,组织学分级,临床分期,渗透,Ki-67和PFN1的阳性表达率与淋巴结转移有关,年龄,肿瘤直径和血管侵犯与Ki-67和PFN1的阳性表达率无关。Ki-67阳性和PFN1阳性表达的膀胱癌患者的生存时间和3年生存率较短。
    BACKGROUND: Bladder cancer is the most common malignancy of the urinary system, and the search for new and reliable biomarkers has important clinical significance for the personalized treatment of bladder cancer. This study aims to explore the correlation between nuclear proliferation antigen (Ki-67) or Profilin-1 (PFN1) levels, clinicopathological characteristics, and postoperative prognosis in patients with bladder cancer.
    METHODS: Patients with bladder cancer who underwent transurethral resection of bladder cancer tumor in The Fourth Affiliated Hospital of Soochow University, hospital from January 2019 to January 2021 were selected as the study group (n = 60), and patients with benign lesions of bladder cancer during the same period were selected as the control group (n = 60). The expression of Ki-67 and PFN1 in tumor and bladder tissues of the two groups was analyzed. Ki-67 recorded the patient\'s pathological parameters and calculated the patient\'s postoperative prognosis. The correlation between Ki-67 and PFN1 expression levels, pathological parameters, and postoperative prognosis was analyzed.
    RESULTS: The positive expression rates of Ki-67 and PFN1 in the study group were 63.33% and 73.33%, respectively, which were significantly higher than the positive expression rates in the control group (χ2 = 14.803, 17.757, p < 0.001). The positive expression rates of Ki-67 and PFN1 were related to histological grade, clinical stage, infiltration, and lymph node metastasis, and the differences were statistically significant (p < 0.05). Bladder cancer patients with non muscle-invasive bladder cancer (NMIBC), high-grade histological grade, Ta~T1 clinical stage, invasive, and lymph node metastasis have a higher Ki-67 positive expression rate than bladder cancer patients with muscle-invasive bladder cancer (MIBC), low-grade histological grade, T2~T4, non-invasive, and no lymph node metastasis. The high expression level of Ki-67 has little relationship with gender, age, tumor diameter, and vascular invasion (p > 0.05). The survival time and three-year survival rate of the Ki-67 positive expression group were significantly lower than those of the Ki-67 negative expression group (p < 0.05). The survival time and three-year survival rate of the PFN1 positive expression group were significantly lower than those of the PFN1 negative expression group (p < 0.05).
    CONCLUSIONS: The positive expression rates of Ki-67 and PFN1 in bladder tumor tissue are significantly higher than those in bladder tissue, and pathological pattern, histological grade, clinical stage, infiltration, and lymph node metastasis are related to the positive expression rates of Ki-67 and PFN1, and different genders, ages, tumors diameter and vascular invasion are not related to the positive expression rates of Ki-67 and PFN1. The survival time and three-year survival rates of bladder cancer patients with Ki-67 positive and PFN1 positive expression are shorter.
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  • 文章类型: English Abstract
    OBJECTIVE: Analyze phylogenetic relationships and molecular mimicry of Cit s 2 and other plant profilins.
    METHODS: Online bioinformatics tools including Basic Local Alignment Search Tool (BLASTP), PRALINE and MEGA were used for multiple alignments and phylogenetic analysis. A 3D-homology model of Cit s 2 was predicted. Models were calculated with MODELLER. The best model was selected with the model scoring option of MAESTRO. Conserved regions between Cit s 2 and other profilins were located on the 3D model and antigenic regions were predicted by ElliPro server (3-5).
    RESULTS: Cit s 2 amino acid sequence (Uniprot code:P84177) was compared with other 30 profilins from different allergenic sources. The identity between Cit s 2 and other profilins ranged between 82 and 99%. The highest identity was observed with Cucumis melo (99%) followed by Prunus persica (98%) and Malus domestica (92%). High conserved antigenic regions were observed on the 3D predicted model. Seven lineal and six discontinuous epitopes were found in Cit s 2.
    CONCLUSIONS: High conserved antigenic regions were observed on the 3D predicted model of Cit s 2, which might involve potential cross-reactivity between Cit s 2 and other profilins. Future studies are needed to further analyze these results.
    OBJECTIVE: Analizar las relaciones filogenéticas y el mimetismo molecular de Cit s 2 y otras profilinas vegetales.
    UNASSIGNED: Se utilizaron herramientas bioinformáticas en línea, incluida la de búsqueda de alineación local básica (BLASTP), PRALINE y MEGA, para alineamientos múltiples y análisis filogenético. Se predijo un modelo de homología 3D de Cit s 2. Los modelos se calcularon con MODELLER. El mejor modelo fue seleccionado con la opción de puntuación de modelo de Maestro. Las regiones conservadas entre Cit s 2 y otras profilinas se ubicaron en el modelo 3D y las regiones antigénicas fueron predichas por el servidor ElliPro (3-5).
    RESULTS: La secuencia de aminoácidos de Cit s 2 (código Uniprot: P84177), se comparó con otras 30 profilinas de diferentes fuentes alergénicas. La mayor identidad se observó con Cucumis melo (99%) seguida de Prunus persica (98%) y Malus domestica (92%). Se observaron regiones antigénicas altamente conservadas en el modelo predicho en 3D. Se encontraron siete epítopes lineales, y seis epítopes discontinuos en Cit s 2.
    UNASSIGNED: Se observaron regiones antigénicas altamente conservadas en el modelo 3D predicho de Cit s 2, lo que podría implicar una posible reactividad cruzada entre Cit s 2 y otras profilinas. Se necesitan estudios futuros para analizar más a fondo estos resultados.
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