Plasma proteomic biomarkers

  • 文章类型: Journal Article
    血浆蛋白质组可以介导不良的口腔健康问题(POHP)与痴呆的联系。我们筛选了37,269名50-74岁(2006-2010)的英国生物银行参与者流行的POHP,在长达15年的随访中,进一步测试了1463种血浆蛋白和偶发性痴呆。POHP-痴呆通过血浆蛋白质组标记的总效应(TE)被分解成纯间接效应(PIE),交互引用(INTREF),受控直接效应(CDE),或介导相互作用(INTMED)。POHP使全因痴呆的风险增加17%(P<0.05)。生长分化因子15(GDF15)的介导作用最强(PIE>0,P<0.001),解释了28%的POHP对痴呆症的总影响,作为纯粹的间接影响。第一个主要成分包括前4个介体(GDF15、IL19、MMP12和ACVRL1),将11%的POHP-痴呆效应解释为纯粹的间接效应。包括所有介质(k=173血浆蛋白)的通路分析揭示了免疫系统的参与,信号转导,新陈代谢,疾病,和基因表达,而STRING分析表明,第一个主成分中的顶级介质也代表在两个最大的蛋白质组中。GDF15簇的主要生物GO途径是GO:0007169标记为跨膜受体蛋白酪氨酸激酶信号通路。“痴呆症与几种蛋白质组标记中GDF15介导的POHP有关。
    The plasma proteome can mediate poor oral health problems (POHP)\'s link to incident dementia. We screened 37,269 UK Biobank participants 50-74 years old (2006-2010) for prevalent POHP, further tested against 1463 plasma proteins and incident dementia over up to 15 years of follow-up. Total effect (TE) of POHP-dementia through plasma proteomic markers was decomposed into pure indirect effect (PIE), interaction referent (INTREF), controlled direct effect (CDE), or mediated interaction (INTMED). POHP increased the risk of all-cause dementia by 17% (P < 0.05). Growth differentiation factor 15 (GDF15) exhibited the strongest mediating effects (PIE > 0, P < 0.001), explaining 28% the total effect of POHP on dementia, as a pure indirect effect. A first principal component encompassing top 4 mediators (GDF15, IL19, MMP12, and ACVRL1), explained 11% of the POHP-dementia effect as a pure indirect effect. Pathway analysis including all mediators (k = 173 plasma proteins) revealed the involvement of the immune system, signal transduction, metabolism, disease, and gene expression, while STRING analysis indicated that top mediators within the first principal component were also represented in the two largest proteomic clusters. The dominant biological GO pathway for the GDF15 cluster was GO:0007169 labeled as \"transmembrane receptor protein tyrosine kinase signaling pathway.\" Dementia is linked to POHP mediated by GDF15 among several proteomic markers.
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  • 文章类型: Journal Article
    背景:这项研究探讨了血浆蛋白质组指标如何解释不良心血管健康(CVH)与痴呆风险之间的联系。
    方法:本研究涉及28,974名年龄在50-74岁(2006-2010年)的英国生物银行参与者,在基线(2006-2010年)时,他们的痴呆发生率≤15岁。CVH使用生命基础8(LE8)总分计算。对分数进行标准化和反向编码以反映较差的CVH(LE8z_rev)。OLINK蛋白质组学可用于该样品(k=1,463血浆蛋白)。该研究主要测试了血浆蛋白质组在LE8z_rev-痴呆效应中的介导作用。总效应被分解为“仅调解”或纯间接效应(PIE),“仅交互”或交互引用(INTREF),“既不是调解也不是互动”或受控直接效应(CDE),和“中介和互动”或中介互动(INTMED)。
    结果:研究发现,LE8z_rev评估的较差CVH会使全因痴呆的风险增加11%[每1SD,危险比,(HR)=1.11,95%CI:1.03-1.20,p=0.005)。该研究确定了11种具有强介导作用的血浆蛋白,GDF15与痴呆风险的关联最强(每1个SD,HR=1.24,95%CI:1.16,1.33,当LE8z_rev设置为其平均值时,P<0.001)和最大比例介导的PIE和INTMED(62.6%;TE的48%是PIE),其次是肾上腺髓质素或ADM。具有10个顶级介体的第一主成分(TNFRSF1A,GDF15,FSTL3,COL6A3,PLAUR,ADM,GFRAL,ACVRL1,TNFRSF6B,TGFA)介导了53.6%的LE8z_rev-痴呆效应。使用所有显著的PIE(k=526)蛋白,我们使用OLINKInsight通路分析来确定关键通路,这揭示了免疫系统的参与,信号转导,新陈代谢,疾病,蛋白质代谢,止血,膜贩运,细胞外基质组织,发育生物学,和基因表达等。STRING分析显示,五个最高一致的蛋白质组介体在两个较大的集群中代表,反映了许多相互关联的生物基因本体论途径,最值得注意的是GDF15簇的细胞因子介导的信号通路(GO:0019221)和ADM簇的肽基酪氨酸磷酸化的调节(GO:0050730)。
    结论:痴呆与GDF15和ADM介导的不良CVH相关,这些标志物共同解释了总效应的54%。
    BACKGROUND: The study examined how plasma proteome indicators may explain the link between poor cardiovascular health (CVH) and dementia risk.
    METHODS: The present study involved 28,974 UK Biobank participants aged 50-74y at baseline (2006-2010) who were followed-up for ≤ 15 y for incidence of dementia. CVH was calculated using Life\'s Essential 8 (LE8) total scores. The scores were standardized and reverse coded to reflect poor CVH (LE8z_rev). OLINK proteomics was available on this sample (k = 1,463 plasma proteins). The study primarily tested the mediating effects of the plasma proteome in LE8z_rev-dementia effect. The total effect was decomposed into \"mediation only\" or pure indirect effect (PIE), \"interaction only\" or interaction referent (INTREF), \"neither mediation nor interaction\" or controlled direct effect (CDE), and \"both mediation and interaction\" or mediated interaction (INTMED).
    RESULTS: The study found poorer CVH assessed by LE8z_rev increased the risk of all-cause dementia by 11 % [per 1 SD, hazard ratio, (HR) = 1.11, 95 % CI: 1.03-1.20, p = 0.005). The study identified 11 plasma proteins with strong mediating effects, with GDF15 having the strongest association with dementia risk (per 1 SD, HR = 1.24, 95 % CI: 1.16, 1.33, P < 0.001 when LE8z_rev is set at its mean value) and the largest proportion mediated combining PIE and INTMED (62.6 %; 48 % of TE is PIE), followed by adrenomedullin or ADM. A first principal component with 10 top mediators (TNFRSF1A, GDF15, FSTL3, COL6A3, PLAUR, ADM, GFRAL, ACVRL1, TNFRSF6B, TGFA) mediated 53.6 % of the LE8z_rev-dementia effect. Using all the significant PIE (k = 526) proteins, we used OLINK Insight pathway analysis to identify key pathways, which revealed the involvement of the immune system, signal transduction, metabolism, disease, protein metabolism, hemostasis, membrane trafficking, extracellular matrix organization, developmental biology, and gene expression among others. STRING analysis revealed that five top consistent proteomic mediators were represented in two larger clusters reflecting numerous interconnected biological gene ontology pathways, most notably cytokine-mediated signaling pathway for GDF15 cluster (GO:0019221) and regulation of peptidyl-tyrosine phosphorylation for the ADM cluster (GO:0050730).
    CONCLUSIONS: Dementia is linked to poor CVH mediated by GDF15 and ADM among several key proteomic markers which collectively explained ∼ 54 % of the total effect.
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  • 文章类型: Journal Article
    在神经退行性疾病领域已经发现了大量的血浆蛋白质组生物标志物。血浆和血清中的新型生物标志物分子可以显着减少临床实践中对侵入性方法的需求,例如用于CSF收集的腰椎穿刺,并且可能对特定患者有用。此外,已鉴定和验证的候选生物标志物蛋白可用于在临床试验中区分MCI和健康对照的阿耳茨海默氏病患者,在临床症状发作之前以及改善个性化治疗。通过蛋白质组学技术开发新的基于血液的生物标志物,为神经退行性疾病的病理生理学提供了深入的知识,并涉及新的治疗靶标的开发。该报告提出了许多膳食化合物,其主要在AD或MCI受试者的血液中促进或抑制生物标志物的表达。
    A large number of plasma proteomic biomarkers have been discovered in the field of neurodegenerative diseases. Novel biomarker molecules in plasma and serum could significantly reduce the need for invasive methods in clinical practice such as the lumbar puncture for CSF collection and may be useful to specific patients. Furthermore, candidate biomarker proteins that have been identified and validated could be used to discriminate Αlzheimer\'s disease patients from MCI and healthy controls in clinical trials, before the onset of clinical symptoms as well as to improve personalized therapies. The development of new blood-based biomarkers via proteomic technology offers a deep knowledge in the pathophysiology of neurodegenerative diseases and involves in the development of new therapeutic targets. This report presents numerous dietary compounds that either promote or suppress the expression of biomarkers mainly in the blood of AD or MCI subjects.
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